FFCP PHASE1:Mm9::chr19:4047063..4047070,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:4047063..4047070,+ | |||
|description=CAGE_peak_at_chr19:4047063..4047070,+ | |||
|id=chr19:4047063..4047070,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.41e-15!9;CL:0002251!7.41e-15!9;CL:0000239!1.30e-10!6;CL:0000677!1.30e-10!6;CL:0000212!1.30e-10!6;CL:0000584!1.30e-10!6;CL:0000075!6.46e-09!7;CL:0002076!6.18e-08!15;CL:0000066!1.90e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.65e-34,9;CL:0002251,3.65e-34,9;CL:0000239,1.01e-23,6;CL:0000677,1.01e-23,6;CL:0000584,1.01e-23,6;CL:0000066,1.18e-20,25;CL:0000075,2.93e-20,7;CL:0002076,6.12e-20,15;CL:0000223,1.36e-14,20;CL:0000682,1.37e-12,3;CL:0002250,5.52e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.82e-24!59;UBERON:0000344!9.37e-23!15;UBERON:0004923!5.19e-22!24;UBERON:0001242!5.91e-20!13;UBERON:0000060!5.91e-20!13;UBERON:0001262!5.91e-20!13;UBERON:0004786!5.91e-20!13;UBERON:0000160!1.54e-18!43;UBERON:0003350!7.41e-15!9;UBERON:0004808!7.41e-15!9;UBERON:0001277!7.41e-15!9;UBERON:0001007!1.86e-14!128;UBERON:0001555!1.86e-14!128;UBERON:0007026!1.86e-14!128;UBERON:0004119!4.91e-14!130;UBERON:0000925!4.91e-14!130;UBERON:0006595!4.91e-14!130;UBERON:0004921!7.55e-13!126;UBERON:0004185!7.55e-13!126;UBERON:0000485!1.07e-11!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.82e-47,15;UBERON:0001242,1.37e-40,13;UBERON:0001262,1.37e-40,13;UBERON:0004786,1.37e-40,13;UBERON:0000160,7.21e-36,31;UBERON:0003350,3.65e-34,9;UBERON:0004808,3.65e-34,9;UBERON:0001277,3.65e-34,9;UBERON:0004923,1.00e-28,24;UBERON:0000485,1.06e-27,11;UBERON:0005409,2.25e-25,47;UBERON:0001007,1.31e-10,116;UBERON:0001555,1.31e-10,116;UBERON:0007026,1.31e-10,116;UBERON:0004119,2.30e-10,118;UBERON:0000925,2.30e-10,118;UBERON:0006595,2.30e-10,118;UBERON:0004921,1.94e-08,114;UBERON:0001962,2.73e-08,2;UBERON:0001961,2.73e-08,2;UBERON:0001744,2.73e-08,2;UBERON:0001155,5.81e-08,2;UBERON:0000059,5.81e-08,2 | |||
|phase1_expression=0,8.02643437570531,8.64498554840118,11.1911758183527,17.0304548181758,4.53274034162102,3.50418960893289,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,0,0,0,3.67982572424835,2.75291137280604,6.31655160526522,5.1691439539089,6.03319451520489,0.380046838912748,1.26015064879965,2.88249663851896,0,0,0,4.33277429626912,2.32728503501889,5.51257261908397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0.884610551949874,0,0.220841518460394,0.484875253135222,1.86391761218122,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,1.05780226665418,0,0,0,0.201683524623343,0.444756087689741,0.380451252225118,1.42358718463353,0.823494773620054,0.502670417600539,0.994782360205754,0.38992817423824,0,1.51296634912286,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.247960367176008,0.785267825952089,3.36998930558661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,8.02643437570531,8.64498554840118,11.1911758183527,17.0304548181758,4.53274034162102,3.50418960893289,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,0,0,0,3.67982572424835,2.75291137280604,6.31655160526522,5.1691439539089,6.03319451520489,0.380046838912748,1.26015064879965,2.88249663851896,0,0,0,4.33277429626912,2.32728503501889,5.51257261908397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0.884610551949874,0,0.220841518460394,0.484875253135222,1.86391761218122,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,1.05780226665418,0,0,0,0.201683524623343,0.444756087689741,0.380451252225118,1.42358718463353,0.823494773620054,0.502670417600539,0.994782360205754,0.38992817423824,0,1.51296634912286,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.247960367176008,0.785267825952089,3.36998930558661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr19:4047063..4047070,+ | |||
}} | }} |
Latest revision as of 01:34, 4 August 2015
Short description: | p@chr19:4047063..4047070, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:4047063..4047070, + |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.65e-34 | 9 |
epithelial cell of alimentary canal | 3.65e-34 | 9 |
brush border epithelial cell | 1.01e-23 | 6 |
gut absorptive cell | 1.01e-23 | 6 |
enterocyte | 1.01e-23 | 6 |
epithelial cell | 1.18e-20 | 25 |
columnar/cuboidal epithelial cell | 2.93e-20 | 7 |
endo-epithelial cell | 6.12e-20 | 15 |
endodermal cell | 1.36e-14 | 20 |
M cell of gut | 1.37e-12 | 3 |
intestinal crypt stem cell | 5.52e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.82e-47 | 15 |
intestinal mucosa | 1.37e-40 | 13 |
wall of intestine | 1.37e-40 | 13 |
gastrointestinal system mucosa | 1.37e-40 | 13 |
intestine | 7.21e-36 | 31 |
epithelium of mucosa | 3.65e-34 | 9 |
gastrointestinal system epithelium | 3.65e-34 | 9 |
intestinal epithelium | 3.65e-34 | 9 |
organ component layer | 1.00e-28 | 24 |
simple columnar epithelium | 1.06e-27 | 11 |
gastrointestinal system | 2.25e-25 | 47 |
digestive system | 1.31e-10 | 116 |
digestive tract | 1.31e-10 | 116 |
primitive gut | 1.31e-10 | 116 |
endoderm-derived structure | 2.30e-10 | 118 |
endoderm | 2.30e-10 | 118 |
presumptive endoderm | 2.30e-10 | 118 |
subdivision of digestive tract | 1.94e-08 | 114 |
gut-associated lymphoid tissue | 2.73e-08 | 2 |
mucosa-associated lymphoid tissue | 2.73e-08 | 2 |
lymphoid tissue | 2.73e-08 | 2 |
colon | 5.81e-08 | 2 |
large intestine | 5.81e-08 | 2 |