FFCP PHASE1:Mm9::chr11:78110831..78110835,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:78110831..78110835,+
|short_description=p@chr11:78110831..78110835,+
|description=CAGE_peak_at_chr11:78110831..78110835,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=389 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:78110831..78110835,+ | |||
|description=CAGE_peak_at_chr11:78110831..78110835,+ | |||
|id=chr11:78110831..78110835,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!8.24e-07!10;UBERON:0000411!8.24e-07!10;UBERON:0001950!8.24e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.62e-16,10;UBERON:0000411,4.62e-16,10;UBERON:0001950,4.62e-16,10;UBERON:0003056,1.40e-12,49;UBERON:0000956,7.56e-12,21;UBERON:0001869,7.56e-12,21;UBERON:0000203,7.56e-12,21;UBERON:0002259,7.19e-11,1;UBERON:0002314,7.19e-11,1;UBERON:0004061,7.19e-11,1;UBERON:0006777,7.19e-11,1;UBERON:0005882,7.19e-11,1;UBERON:0001851,1.12e-10,1;UBERON:0005889,1.12e-10,1;UBERON:0002619,1.30e-09,17;UBERON:0002346,1.44e-09,64;UBERON:0003075,1.44e-09,64;UBERON:0007284,1.44e-09,64;UBERON:0003080,9.02e-09,40;UBERON:0003528,1.29e-08,29;UBERON:0002791,1.29e-08,29;UBERON:0001893,1.29e-08,29;UBERON:0010371,2.39e-08,73;UBERON:0002616,1.30e-07,46;UBERON:0000955,1.90e-07,47;UBERON:0006238,1.90e-07,47;UBERON:0002020,2.33e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0.0797721589953364,0.171200729931206,0,0.333109761815663,0.809901069559304,0,0,0.137114433605739,0,0.17008658030214,0.397163804803541,0.783599367416806,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0.41889341362691,0,0,0,0,1.04853447583376,0.457500602818626,0,1.91206752211504,1.02286182932132,0.20778804455956,0.324482526135515,0,0,0,1.26265113531884,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,6.72628763921441,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0.420579897128254,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0.321101179975584,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0,0,0.180938774784468,0.238744688006273,0,0.291480836629851,0.556275906031529,0,0,0,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0.337912250981556,0,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0.389762468933385,0,0,0,0,0.403865799792591,0.0762068066549998,0.201652370273681,0.292373642219257,0,0.116876902181569,0,0,0,0.167884616364078,0,0.375364950902364,0,0,0,0,0,0.572895513439397,1.03111909406213,0.685082519770642,3.7769694869485,1.35004500046361,0.900642406448441,2.26571204492102,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0.0797721589953364,0.171200729931206,0,0.333109761815663,0.809901069559304,0,0,0.137114433605739,0,0.17008658030214,0.397163804803541,0.783599367416806,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0.41889341362691,0,0,0,0,1.04853447583376,0.457500602818626,0,1.91206752211504,1.02286182932132,0.20778804455956,0.324482526135515,0,0,0,1.26265113531884,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,6.72628763921441,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0.420579897128254,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0.321101179975584,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0,0,0.180938774784468,0.238744688006273,0,0.291480836629851,0.556275906031529,0,0,0,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0.337912250981556,0,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0.389762468933385,0,0,0,0,0.403865799792591,0.0762068066549998,0.201652370273681,0.292373642219257,0,0.116876902181569,0,0,0,0.167884616364078,0,0.375364950902364,0,0,0,0,0,0.572895513439397,1.03111909406213,0.685082519770642,3.7769694869485,1.35004500046361,0.900642406448441,2.26571204492102,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr11:78110831..78110835,+ | |||
}} | }} |
Latest revision as of 01:38, 4 August 2015
Short description: | p@chr11:78110831..78110835, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:78110831..78110835, + |
Coexpression cluster: | MCL_coexpression_mm9:389 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.62e-16 | 10 |
visual cortex | 4.62e-16 | 10 |
neocortex | 4.62e-16 | 10 |
pre-chordal neural plate | 1.40e-12 | 49 |
cerebral cortex | 7.56e-12 | 21 |
cerebral hemisphere | 7.56e-12 | 21 |
pallium | 7.56e-12 | 21 |
corpora quadrigemina | 7.19e-11 | 1 |
midbrain tectum | 7.19e-11 | 1 |
neural tube mantle layer | 7.19e-11 | 1 |
tectal plate | 7.19e-11 | 1 |
neural tube alar plate | 7.19e-11 | 1 |
cortex | 1.12e-10 | 1 |
zygote cortex | 1.12e-10 | 1 |
regional part of cerebral cortex | 1.30e-09 | 17 |
neurectoderm | 1.44e-09 | 64 |
neural plate | 1.44e-09 | 64 |
presumptive neural plate | 1.44e-09 | 64 |
anterior neural tube | 9.02e-09 | 40 |
brain grey matter | 1.29e-08 | 29 |
regional part of telencephalon | 1.29e-08 | 29 |
telencephalon | 1.29e-08 | 29 |
ecto-epithelium | 2.39e-08 | 73 |
regional part of brain | 1.30e-07 | 46 |
brain | 1.90e-07 | 47 |
future brain | 1.90e-07 | 47 |
gray matter | 2.33e-07 | 34 |