FFCP PHASE1:Mm9::chr5:23665663..23665666,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2228 | |MCL_coexpression_id=2228 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:23665663..23665666,+ | |||
|description=CAGE_peak_at_chr5:23665663..23665666,+ | |description=CAGE_peak_at_chr5:23665663..23665666,+ | ||
|id=chr5:23665663..23665666,+ | |id=chr5:23665663..23665666,+ | ||
Latest revision as of 04:56, 4 August 2015
| Short description: | p@chr5:23665663..23665666, + |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr5:23665663..23665666, + |
| Coexpression cluster: | MCL_coexpression_mm9:2228 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr5:23665663..23665666+ |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron of the ventral spinal cord | 3.28e-58 | 3 |
| CNS neuron (sensu Vertebrata) | 8.45e-09 | 23 |
| neuroblast (sensu Vertebrata) | 8.45e-09 | 23 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| ventral horn of spinal cord | 3.28e-58 | 3 |
| regional part of spinal cord | 1.42e-35 | 5 |
| gray matter of spinal cord | 1.42e-35 | 5 |
| spinal cord | 6.66e-30 | 6 |
| dorsal region element | 6.66e-30 | 6 |
| dorsum | 6.66e-30 | 6 |
| posterior neural tube | 1.13e-15 | 12 |
| chordal neural plate | 1.13e-15 | 12 |
| cavitated compound organ | 1.61e-09 | 21 |
Showing 1 to 9 of 9 entries
