Personal tools

FFCP PHASE1:Mm9::chr5:23665663..23665666,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=2228
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr5:23665663..23665666,+
|description=CAGE_peak_at_chr5:23665663..23665666,+
|description=CAGE_peak_at_chr5:23665663..23665666,+
|id=chr5:23665663..23665666,+
|id=chr5:23665663..23665666,+
|ontology_enrichment_celltype=CL:0000117!1.19e-50!23;CL:0000337!1.19e-50!23;CL:0000540!1.22e-34!33;CL:0000047!1.22e-34!33;CL:0000031!1.22e-34!33;CL:0000404!1.22e-34!33;CL:0002319!4.39e-33!43;CL:0000221!2.80e-32!44;CL:0000133!2.80e-32!44;CL:0000393!5.79e-29!39;CL:0000211!5.79e-29!39;CL:0000055!4.03e-28!50;CL:0002609!2.03e-19!6;CL:0002321!2.18e-19!70;CL:0000220!2.18e-19!70;CL:0002612!7.90e-16!3;CL:0000120!1.51e-14!3;CL:0000723!1.18e-12!91;CL:0000048!1.18e-12!91;CL:0000548!2.87e-12!115;CL:0000004!2.87e-12!115;CL:0000255!2.87e-12!115;CL:0002371!6.88e-12!118;CL:0000034!1.03e-11!97;CL:0000144!1.58e-11!121;CL:0000012!1.58e-11!121;CL:0002610!1.42e-07!3;CL:0002608!2.36e-07!3;CL:0002613!3.89e-07!3
|ontology_enrichment_celltype_v019_2=CL:0002612,3.28e-58,3;CL:0000117,8.45e-09,23;CL:0000337,8.45e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.73e-18!73;UBERON:0005743!1.73e-18!73;UBERON:0002020!3.33e-18!34;UBERON:0000073!6.26e-18!75;UBERON:0001016!6.26e-18!75;UBERON:0002257!7.90e-16!3;UBERON:0004121!1.67e-12!102;UBERON:0000924!1.67e-12!102;UBERON:0006601!1.67e-12!102;UBERON:0002791!1.05e-11!29;UBERON:0003528!1.05e-11!29;UBERON:0001893!1.05e-11!29;UBERON:0001049!2.92e-11!52;UBERON:0005068!2.92e-11!52;UBERON:0006241!2.92e-11!52;UBERON:0007135!2.92e-11!52;UBERON:0002616!6.35e-10!49;UBERON:0001948!1.07e-09!5;UBERON:0002315!1.07e-09!5;UBERON:0000955!1.08e-09!50;UBERON:0006238!1.08e-09!50;UBERON:0002780!2.16e-08!39;UBERON:0001890!2.16e-08!39;UBERON:0006240!2.16e-08!39;UBERON:0002240!3.75e-08!6;UBERON:0005174!3.75e-08!6;UBERON:0001137!3.75e-08!6;UBERON:0003080!3.76e-08!40;UBERON:0002346!9.74e-08!71;UBERON:0003075!9.74e-08!71;UBERON:0007284!9.74e-08!71;UBERON:0004684!1.42e-07!3;UBERON:0002275!1.42e-07!3;UBERON:0000956!1.63e-07!21;UBERON:0001869!1.63e-07!21;UBERON:0000203!1.63e-07!21;UBERON:0000033!2.42e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0002257,3.28e-58,3;UBERON:0001948,1.42e-35,5;UBERON:0002315,1.42e-35,5;UBERON:0002240,6.66e-30,6;UBERON:0005174,6.66e-30,6;UBERON:0001137,6.66e-30,6;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12;UBERON:0000489,1.61e-09,21
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.420649922702764,0,0,0.61245399607477,0.575072826109418,0,0,0.638436690425939,0.768032666281217,0.395658863190582,0.548925861614458,0,0.279182999001381,0,0,1.76777151284201,2.13557521198654,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.420649922702764,0,0,0.61245399607477,0.575072826109418,0,0,0.638436690425939,0.768032666281217,0.395658863190582,0.548925861614458,0,0.279182999001381,0,0,1.76777151284201,2.13557521198654,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr5:23665663..23665666,+
|short_description=p@chr5:23665663..23665666,+
}}
}}

Latest revision as of 04:56, 4 August 2015

Short description:p@chr5:23665663..23665666, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr5:23665663..23665666, +
Coexpression cluster:MCL_coexpression_mm9:2228
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
0.5
1.0
1.5
2.0
2.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:23665663..23665666,%2B&oldid=3738854"