FFCP PHASE1:Mm9::chr11:84339016..84339044,-: Difference between revisions
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{{FFCP|EntrezGene=16869|HGNC=|MCL_coexpression_id=2001|UniProt=P63006,Q569N5|association_with_transcript=0bp_to_NM_008498,uc007kqo.1_5end|description=CAGE_peak_1_at_Lhx1_5end|id=chr11:84339016..84339044,-|ontology_enrichment_celltype=CL:0000117!2.15e-13!23;CL:0000337!2.15e-13!23;CL:0000540!8.27e-08!33;CL:0000047!8.27e-08!33;CL:0000031!8.27e-08!33;CL:0000404!8.27e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.11e-14,23;CL:0000337,3.11e-14,23;CL:0000540,5.85e-08,33;CL:0000047,5.85e-08,33;CL:0000031,5.85e-08,33;CL:0000404,5.85e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!1.60e-11!21;UBERON:0002113!3.38e-08!14;UBERON:0003918!3.38e-08!14;UBERON:0005095!3.38e-08!14;UBERON:0007687!3.38e-08!14;UBERON:0002346!6.35e-07!71;UBERON:0003075!6.35e-07!71;UBERON:0007284!6.35e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.30e-13,21;UBERON:0002113,9.47e-09,14;UBERON:0003918,9.47e-09,14;UBERON:0011143,9.47e-09,14;UBERON:0005095,9.47e-09,14;UBERON:0007687,9.47e-09,14;UBERON:0003076,2.06e-08,12;UBERON:0003057,2.06e-08,12;UBERON:0002240,2.73e-07,6;UBERON:0005174,2.73e-07,6;UBERON:0001137,2.73e-07,6|phase1_expression=0,0,0,0,0,1.51091344720701,1.86890112476421,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,55.4347102755298,55.0150618442914,49.438849473482,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,1.05162480675691,19.9955689082663,17.2277461942259,0.122490799214954,1.15014565221884,0,5.50579404996943,3.70293280447044,9.36999852863085,44.9732241159961,44.8289453651807,37.5057626800867,6.14202597803038,10.1297269805702,8.55670187550137,20.3293723976831,23.7760706934502,39.3302830691384,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0.520455980298408,0.608930956624282,1.38369298353635,0,0.470354828542819,0,0,0,0,0,0,0,0,34.255353250351,27.6469652993761,0,0,0,0,5.09288173976397,0.457500602818626,0.502617408451458,0,0,4.1557608911912,2.10913641988085,5.49932564791708,0.248813941220186,0.252722758433675,0.631325567659422,0.130120442962704,0.229902104433473,1.62055916824814,1.05493372485001,1.97305847538851,1.7935920839879,1.59292931751539,2.06962696591213,0.646703978798527,0,0,0,0,0,0,6.17006227137329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.74937841044784,0.330418782983798,0,0.213288250535234,0,0.38660238396628,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,40.2095950020533,27.6481400515544,59.7350999067326,28.511185898344,24.2440608959532,18.7262639107151,5.05892296994058,12.8420828742254,10.5189147653721,7.03363834354263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,4.0137647496948,3.6335622843583,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0,1.42452482933804,0.651547837414304,0,0,3.64170954232472,2.11626489875326,0.943025398779491,1.77181135728464,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,2.52085531643834,1.55230420539305,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0.582961673259701,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,1.62655573701479,0,0,0,0,0,0,0,0,3.38215763210514,4.78452947340732,3.47462829959905,0,0.516639293910924,0,0.704143431874524,1.43224823328345,0.104859344425711,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.492355185943,28.7297908848742,8.02447947044431,3.64660075602441,7.33646069197938,3.67687016900028,2.00022055021454,2.88449080134452,2.24643446714271,4.04315538822076,2.28131369901216,3.01802146217722,3.09016974650612,3.90553429669703,3.38869266838118,3.33405583898152,2.66533949673168,3.08654752741928,2.47251540481984,2.79677948255355,2.05721551431249,2.30718548007139,3.09967046931517,2.47088908274958,2.07040636913727,1.60767754994185,2.74391959309159,3.6829759601298,4.6173398707593,2.80571135828869,2.96587545310435,2.9551344712669,2.45538625901814,2.63392630016142,1.54325288784913,5.9954538705107,2.33931608445408,3.22306581072447,0.765153328275374,0,0|short_description=p1@Lhx1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16869 | |||
|HGNC= | |||
|MCL_coexpression_id=2001 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63006,uniprot:Q569N5 | |||
|association_with_transcript=0bp_to_NM_008498,uc007kqo.1_5end | |||
|cluster_id=chr11:84339016..84339044,- | |||
|description=CAGE_peak_1_at_Lhx1_5end | |||
|id=chr11:84339016..84339044,- | |||
|ontology_enrichment_celltype=CL:0000117!2.15e-13!23;CL:0000337!2.15e-13!23;CL:0000540!8.27e-08!33;CL:0000047!8.27e-08!33;CL:0000031!8.27e-08!33;CL:0000404!8.27e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.11e-14,23;CL:0000337,3.11e-14,23;CL:0000540,5.85e-08,33;CL:0000047,5.85e-08,33;CL:0000031,5.85e-08,33;CL:0000404,5.85e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.60e-11!21;UBERON:0002113!3.38e-08!14;UBERON:0003918!3.38e-08!14;UBERON:0005095!3.38e-08!14;UBERON:0007687!3.38e-08!14;UBERON:0002346!6.35e-07!71;UBERON:0003075!6.35e-07!71;UBERON:0007284!6.35e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.30e-13,21;UBERON:0002113,9.47e-09,14;UBERON:0003918,9.47e-09,14;UBERON:0011143,9.47e-09,14;UBERON:0005095,9.47e-09,14;UBERON:0007687,9.47e-09,14;UBERON:0003076,2.06e-08,12;UBERON:0003057,2.06e-08,12;UBERON:0002240,2.73e-07,6;UBERON:0005174,2.73e-07,6;UBERON:0001137,2.73e-07,6 | |||
|phase1_expression=0,0,0,0,0,1.51091344720701,1.86890112476421,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,55.4347102755298,55.0150618442914,49.438849473482,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,1.05162480675691,19.9955689082663,17.2277461942259,0.122490799214954,1.15014565221884,0,5.50579404996943,3.70293280447044,9.36999852863085,44.9732241159961,44.8289453651807,37.5057626800867,6.14202597803038,10.1297269805702,8.55670187550137,20.3293723976831,23.7760706934502,39.3302830691384,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0.520455980298408,0.608930956624282,1.38369298353635,0,0.470354828542819,0,0,0,0,0,0,0,0,34.255353250351,27.6469652993761,0,0,0,0,5.09288173976397,0.457500602818626,0.502617408451458,0,0,4.1557608911912,2.10913641988085,5.49932564791708,0.248813941220186,0.252722758433675,0.631325567659422,0.130120442962704,0.229902104433473,1.62055916824814,1.05493372485001,1.97305847538851,1.7935920839879,1.59292931751539,2.06962696591213,0.646703978798527,0,0,0,0,0,0,6.17006227137329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.74937841044784,0.330418782983798,0,0.213288250535234,0,0.38660238396628,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,40.2095950020533,27.6481400515544,59.7350999067326,28.511185898344,24.2440608959532,18.7262639107151,5.05892296994058,12.8420828742254,10.5189147653721,7.03363834354263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,4.0137647496948,3.6335622843583,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0,1.42452482933804,0.651547837414304,0,0,3.64170954232472,2.11626489875326,0.943025398779491,1.77181135728464,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,2.52085531643834,1.55230420539305,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0.582961673259701,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,1.62655573701479,0,0,0,0,0,0,0,0,3.38215763210514,4.78452947340732,3.47462829959905,0,0.516639293910924,0,0.704143431874524,1.43224823328345,0.104859344425711,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.492355185943,28.7297908848742,8.02447947044431,3.64660075602441,7.33646069197938,3.67687016900028,2.00022055021454,2.88449080134452,2.24643446714271,4.04315538822076,2.28131369901216,3.01802146217722,3.09016974650612,3.90553429669703,3.38869266838118,3.33405583898152,2.66533949673168,3.08654752741928,2.47251540481984,2.79677948255355,2.05721551431249,2.30718548007139,3.09967046931517,2.47088908274958,2.07040636913727,1.60767754994185,2.74391959309159,3.6829759601298,4.6173398707593,2.80571135828869,2.96587545310435,2.9551344712669,2.45538625901814,2.63392630016142,1.54325288784913,5.9954538705107,2.33931608445408,3.22306581072447,0.765153328275374,0,0 | |||
|short_description=p1@Lhx1 | |||
}} |
Revision as of 05:17, 4 August 2015
Short description: | p1@Lhx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lhx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2001 |
Association with transcript: | 0bp_to_NM_008498, uc007kqo.1_5end |
EntrezGene: | 16869 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.11e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.11e-14 | 23 |
neuron | 5.85e-08 | 33 |
neuronal stem cell | 5.85e-08 | 33 |
neuroblast | 5.85e-08 | 33 |
electrically signaling cell | 5.85e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 2.30e-13 | 21 |
kidney | 9.47e-09 | 14 |
kidney mesenchyme | 9.47e-09 | 14 |
upper urinary tract | 9.47e-09 | 14 |
kidney rudiment | 9.47e-09 | 14 |
kidney field | 9.47e-09 | 14 |
posterior neural tube | 2.06e-08 | 12 |
chordal neural plate | 2.06e-08 | 12 |
spinal cord | 2.73e-07 | 6 |
dorsal region element | 2.73e-07 | 6 |
dorsum | 2.73e-07 | 6 |