FFCP PHASE1:Mm9::chr11:94506584..94506586,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:94506584..94506586,+|id=chr11:94506584..94506586,+|ontology_enrichment_celltype=CL:0002453!2.37e-15!8;CL:0000333!3.72e-15!10;CL:0000095!3.72e-15!10;CL:0000243!3.72e-15!10;CL:0000123!3.72e-15!10;CL:0000125!3.72e-15!10;CL:0000030!3.72e-15!10;CL:0000339!3.72e-15!10;CL:0000128!1.26e-10!6;CL:0000126!1.26e-10!6;CL:0000127!1.26e-10!6;CL:0002319!6.13e-08!43;CL:0000221!1.09e-07!44;CL:0000133!1.09e-07!44|ontology_enrichment_celltype_v019_2=CL:0002453,6.68e-44,8;CL:0000878,7.52e-44,2;CL:0000129,7.52e-44,2;CL:0000333,2.37e-35,10;CL:0000095,2.37e-35,10;CL:0000243,2.37e-35,10;CL:0000123,2.37e-35,10;CL:0000125,2.37e-35,10;CL:0000030,2.37e-35,10;CL:0000339,2.37e-35,10;CL:0002194,1.39e-22,4;CL:0000766,1.39e-22,4;CL:0000234,1.39e-22,4;CL:0000576,1.39e-22,4;CL:0000235,1.39e-22,4;CL:0000864,1.39e-22,4;CL:0002009,1.39e-22,4;CL:0000040,1.39e-22,4;CL:0000559,1.39e-22,4;CL:0000128,1.34e-15,6;CL:0000126,1.34e-15,6;CL:0000127,1.34e-15,6;CL:0000473,2.07e-13,7;CL:0000557,2.07e-13,7;CL:0002605,2.42e-12,2;CL:0002604,2.42e-12,2;CL:0002603,4.02e-12,2;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0000839,1.05e-07,13;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.32e-25!75;UBERON:0001016!9.32e-25!75;UBERON:0001017!7.07e-24!73;UBERON:0005743!7.07e-24!73;UBERON:0001049!8.06e-24!52;UBERON:0005068!8.06e-24!52;UBERON:0006241!8.06e-24!52;UBERON:0007135!8.06e-24!52;UBERON:0000955!1.12e-18!50;UBERON:0006238!1.12e-18!50;UBERON:0004121!1.02e-17!102;UBERON:0000924!1.02e-17!102;UBERON:0006601!1.02e-17!102;UBERON:0002346!2.24e-17!71;UBERON:0003075!2.24e-17!71;UBERON:0007284!2.24e-17!71;UBERON:0002616!2.84e-17!49;UBERON:0000033!3.26e-15!63;UBERON:0003076!3.74e-15!12;UBERON:0003057!3.74e-15!12;UBERON:0002020!1.60e-14!34;UBERON:0002619!1.00e-12!17;UBERON:0003080!6.45e-12!40;UBERON:0000956!7.50e-12!21;UBERON:0001869!7.50e-12!21;UBERON:0000203!7.50e-12!21;UBERON:0002791!2.20e-11!29;UBERON:0003528!2.20e-11!29;UBERON:0001893!2.20e-11!29;UBERON:0002037!6.10e-11!4;UBERON:0002680!6.10e-11!4;UBERON:0001895!6.10e-11!4;UBERON:0010092!6.10e-11!4;UBERON:0006215!6.10e-11!4;UBERON:0002780!9.40e-11!39;UBERON:0001890!9.40e-11!39;UBERON:0006240!9.40e-11!39;UBERON:0004733!1.89e-10!6;UBERON:0004732!1.89e-10!6;UBERON:0002028!1.89e-10!6;UBERON:0007277!1.89e-10!6;UBERON:0003056!2.28e-10!49;UBERON:0000025!2.51e-10!114;UBERON:0007811!1.09e-09!86;UBERON:0004111!3.13e-09!122;UBERON:0002021!1.25e-08!10;UBERON:0000411!1.25e-08!10;UBERON:0001950!1.25e-08!10;UBERON:0000153!2.06e-08!94|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.74420125104357,0.439372365468944,6.02732687130279,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,5.37905627450176,0.103689612308478,0,0,0.571301968807607,0,0,0,0,0,0,0,0,0,0,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.83115217823824,0.486723789203273,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:94506584..94506586,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:94506584..94506586,+ | |||
|description=CAGE_peak_at_chr11:94506584..94506586,+ | |||
|id=chr11:94506584..94506586,+ | |||
|ontology_enrichment_celltype=CL:0002453!2.37e-15!8;CL:0000333!3.72e-15!10;CL:0000095!3.72e-15!10;CL:0000243!3.72e-15!10;CL:0000123!3.72e-15!10;CL:0000125!3.72e-15!10;CL:0000030!3.72e-15!10;CL:0000339!3.72e-15!10;CL:0000128!1.26e-10!6;CL:0000126!1.26e-10!6;CL:0000127!1.26e-10!6;CL:0002319!6.13e-08!43;CL:0000221!1.09e-07!44;CL:0000133!1.09e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.68e-44,8;CL:0000878,7.52e-44,2;CL:0000129,7.52e-44,2;CL:0000333,2.37e-35,10;CL:0000095,2.37e-35,10;CL:0000243,2.37e-35,10;CL:0000123,2.37e-35,10;CL:0000125,2.37e-35,10;CL:0000030,2.37e-35,10;CL:0000339,2.37e-35,10;CL:0002194,1.39e-22,4;CL:0000766,1.39e-22,4;CL:0000234,1.39e-22,4;CL:0000576,1.39e-22,4;CL:0000235,1.39e-22,4;CL:0000864,1.39e-22,4;CL:0002009,1.39e-22,4;CL:0000040,1.39e-22,4;CL:0000559,1.39e-22,4;CL:0000128,1.34e-15,6;CL:0000126,1.34e-15,6;CL:0000127,1.34e-15,6;CL:0000473,2.07e-13,7;CL:0000557,2.07e-13,7;CL:0002605,2.42e-12,2;CL:0002604,2.42e-12,2;CL:0002603,4.02e-12,2;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0000839,1.05e-07,13;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.32e-25!75;UBERON:0001016!9.32e-25!75;UBERON:0001017!7.07e-24!73;UBERON:0005743!7.07e-24!73;UBERON:0001049!8.06e-24!52;UBERON:0005068!8.06e-24!52;UBERON:0006241!8.06e-24!52;UBERON:0007135!8.06e-24!52;UBERON:0000955!1.12e-18!50;UBERON:0006238!1.12e-18!50;UBERON:0004121!1.02e-17!102;UBERON:0000924!1.02e-17!102;UBERON:0006601!1.02e-17!102;UBERON:0002346!2.24e-17!71;UBERON:0003075!2.24e-17!71;UBERON:0007284!2.24e-17!71;UBERON:0002616!2.84e-17!49;UBERON:0000033!3.26e-15!63;UBERON:0003076!3.74e-15!12;UBERON:0003057!3.74e-15!12;UBERON:0002020!1.60e-14!34;UBERON:0002619!1.00e-12!17;UBERON:0003080!6.45e-12!40;UBERON:0000956!7.50e-12!21;UBERON:0001869!7.50e-12!21;UBERON:0000203!7.50e-12!21;UBERON:0002791!2.20e-11!29;UBERON:0003528!2.20e-11!29;UBERON:0001893!2.20e-11!29;UBERON:0002037!6.10e-11!4;UBERON:0002680!6.10e-11!4;UBERON:0001895!6.10e-11!4;UBERON:0010092!6.10e-11!4;UBERON:0006215!6.10e-11!4;UBERON:0002780!9.40e-11!39;UBERON:0001890!9.40e-11!39;UBERON:0006240!9.40e-11!39;UBERON:0004733!1.89e-10!6;UBERON:0004732!1.89e-10!6;UBERON:0002028!1.89e-10!6;UBERON:0007277!1.89e-10!6;UBERON:0003056!2.28e-10!49;UBERON:0000025!2.51e-10!114;UBERON:0007811!1.09e-09!86;UBERON:0004111!3.13e-09!122;UBERON:0002021!1.25e-08!10;UBERON:0000411!1.25e-08!10;UBERON:0001950!1.25e-08!10;UBERON:0000153!2.06e-08!94 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.74420125104357,0.439372365468944,6.02732687130279,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,5.37905627450176,0.103689612308478,0,0,0.571301968807607,0,0,0,0,0,0,0,0,0,0,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.83115217823824,0.486723789203273,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:94506584..94506586,+ | |||
}} |
Latest revision as of 08:57, 4 August 2015
Short description: | p@chr11:94506584..94506586, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:94506584..94506586, + |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.68e-44 | 8 |
central nervous system macrophage | 7.52e-44 | 2 |
microglial cell | 7.52e-44 | 2 |
migratory neural crest cell | 2.37e-35 | 10 |
neuron associated cell | 2.37e-35 | 10 |
glial cell (sensu Vertebrata) | 2.37e-35 | 10 |
neuron associated cell (sensu Vertebrata) | 2.37e-35 | 10 |
glial cell | 2.37e-35 | 10 |
glioblast | 2.37e-35 | 10 |
glioblast (sensu Vertebrata) | 2.37e-35 | 10 |
monopoietic cell | 1.39e-22 | 4 |
myeloid leukocyte | 1.39e-22 | 4 |
phagocyte | 1.39e-22 | 4 |
monocyte | 1.39e-22 | 4 |
macrophage | 1.39e-22 | 4 |
tissue-resident macrophage | 1.39e-22 | 4 |
macrophage dendritic cell progenitor | 1.39e-22 | 4 |
monoblast | 1.39e-22 | 4 |
promonocyte | 1.39e-22 | 4 |
oligodendrocyte | 1.34e-15 | 6 |
macroglial cell | 1.34e-15 | 6 |
astrocyte | 1.34e-15 | 6 |
defensive cell | 2.07e-13 | 7 |
granulocyte monocyte progenitor cell | 2.07e-13 | 7 |
astrocyte of the cerebral cortex | 2.42e-12 | 2 |
astrocyte of the hippocampus | 2.42e-12 | 2 |
astrocyte of the cerebellum | 4.02e-12 | 2 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
myeloid lineage restricted progenitor cell | 1.05e-07 | 13 |
motile cell | 2.91e-07 | 54 |