FFCP PHASE1:Mm9::chr19:56536055..56536062,+: Difference between revisions
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{{FFCP|EntrezGene=226245|HGNC=|MCL_coexpression_id=3210|UniProt=Q8BW88|association_with_transcript=-64bp_to_ENSMUST00000039666,NM_001164263,NM_172641,uc008hyy.2,uc008hyz.2_5end|description=CAGE_peak_4_at_9930023K05Rik_5end|id=chr19:56536055..56536062,+|ontology_enrichment_celltype=CL:0000473!6.66e-11!3;CL:0000627!6.66e-11!3;CL:0000682!6.66e-11!3;CL:0000066!6.16e-09!25;CL:0002563!1.73e-08!9;CL:0002251!1.73e-08!9|ontology_enrichment_celltype_v019_2=CL:0000682,6.21e-20,3;CL:0000473,7.09e-09,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.34e-12!15;UBERON:0000080!2.34e-12!4;UBERON:0005904!2.34e-12!4;UBERON:0006947!2.34e-12!4;UBERON:0002120!2.34e-12!4;UBERON:0004054!2.34e-12!4;UBERON:0004875!2.34e-12!4;UBERON:0004876!2.34e-12!4;UBERON:0005721!2.34e-12!4;UBERON:0005754!2.34e-12!4;UBERON:0007297!2.34e-12!4;UBERON:0005156!1.40e-10!26;UBERON:0000990!1.40e-10!26;UBERON:0000992!2.49e-10!3;UBERON:0001301!1.56e-09!3;UBERON:0006555!1.56e-09!3;UBERON:0005103!1.56e-09!3;UBERON:0000083!1.56e-09!3;UBERON:0009201!1.56e-09!3;UBERON:0004819!1.56e-09!3;UBERON:0006553!1.56e-09!3;UBERON:0003074!1.56e-09!3;UBERON:0003060!1.56e-09!3;UBERON:0000474!3.60e-09!9;UBERON:0004175!1.61e-08!9;UBERON:0003350!1.73e-08!9;UBERON:0004808!1.73e-08!9;UBERON:0001277!1.73e-08!9;UBERON:0000058!2.85e-08!6;UBERON:0001242!2.87e-08!13;UBERON:0000060!2.87e-08!13;UBERON:0001262!2.87e-08!13;UBERON:0004786!2.87e-08!13;UBERON:0001962!1.08e-07!2;UBERON:0001961!1.08e-07!2;UBERON:0001744!1.08e-07!2;UBERON:0003100!1.94e-07!11;UBERON:0004923!2.10e-07!24;UBERON:0010147!2.60e-07!2;UBERON:0003937!2.60e-07!2;UBERON:0005399!2.60e-07!2;UBERON:0003133!2.83e-07!24;UBERON:0000485!6.84e-07!11;UBERON:0001343!8.04e-07!2;UBERON:0004910!8.04e-07!2;UBERON:0004909!8.04e-07!2;UBERON:0005154!8.04e-07!2;UBERON:0005295!8.04e-07!2;UBERON:0005297!8.04e-07!2;UBERON:0005294!8.04e-07!2;UBERON:0010141!8.04e-07!2;UBERON:0005891!8.04e-07!2;UBERON:0003134!8.96e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.27e-13,2;UBERON:0001961,1.27e-13,2;UBERON:0001744,1.27e-13,2;UBERON:0010147,7.06e-13,2;UBERON:0003937,7.06e-13,2;UBERON:0005399,7.06e-13,2;UBERON:0000474,8.78e-12,9;UBERON:0000344,1.76e-10,15;UBERON:0003100,1.11e-09,11;UBERON:0002465,2.17e-09,3;UBERON:0000992,2.90e-09,3;UBERON:0005156,1.99e-08,26;UBERON:0000990,1.99e-08,26;UBERON:0000993,4.65e-08,1;UBERON:0003134,9.27e-08,8;UBERON:0003199,1.33e-07,1;UBERON:0002367,2.74e-07,1;UBERON:0009846,2.74e-07,1;UBERON:0003353,2.74e-07,1;UBERON:0004902,2.74e-07,1;UBERON:0003820,2.74e-07,1;UBERON:0009847,2.74e-07,1;UBERON:0007023,3.13e-07,51;UBERON:0000998,3.16e-07,1;UBERON:0007194,3.16e-07,1;UBERON:0006868,3.16e-07,1|phase1_expression=0,0,0.909998478779072,0,0,1.17515490338323,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,2.06468352960453,3.44539178469012,2.58457197695445,1.72376986148711,0,0,2.66076612786366,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55492153374884,0.534196811001766,1.14020871547503,9.40329700943452,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10264199027481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,3.6630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@9930023K05Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226245 | |||
|HGNC= | |||
|MCL_coexpression_id=3210 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BW88 | |||
|association_with_transcript=-64bp_to_ENSMUST00000039666,NM_001164263,NM_172641,uc008hyy.2,uc008hyz.2_5end | |||
|cluster_id=chr19:56536055..56536062,+ | |||
|description=CAGE_peak_4_at_9930023K05Rik_5end | |||
|id=chr19:56536055..56536062,+ | |||
|ontology_enrichment_celltype=CL:0000473!6.66e-11!3;CL:0000627!6.66e-11!3;CL:0000682!6.66e-11!3;CL:0000066!6.16e-09!25;CL:0002563!1.73e-08!9;CL:0002251!1.73e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.21e-20,3;CL:0000473,7.09e-09,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.34e-12!15;UBERON:0000080!2.34e-12!4;UBERON:0005904!2.34e-12!4;UBERON:0006947!2.34e-12!4;UBERON:0002120!2.34e-12!4;UBERON:0004054!2.34e-12!4;UBERON:0004875!2.34e-12!4;UBERON:0004876!2.34e-12!4;UBERON:0005721!2.34e-12!4;UBERON:0005754!2.34e-12!4;UBERON:0007297!2.34e-12!4;UBERON:0005156!1.40e-10!26;UBERON:0000990!1.40e-10!26;UBERON:0000992!2.49e-10!3;UBERON:0001301!1.56e-09!3;UBERON:0006555!1.56e-09!3;UBERON:0005103!1.56e-09!3;UBERON:0000083!1.56e-09!3;UBERON:0009201!1.56e-09!3;UBERON:0004819!1.56e-09!3;UBERON:0006553!1.56e-09!3;UBERON:0003074!1.56e-09!3;UBERON:0003060!1.56e-09!3;UBERON:0000474!3.60e-09!9;UBERON:0004175!1.61e-08!9;UBERON:0003350!1.73e-08!9;UBERON:0004808!1.73e-08!9;UBERON:0001277!1.73e-08!9;UBERON:0000058!2.85e-08!6;UBERON:0001242!2.87e-08!13;UBERON:0000060!2.87e-08!13;UBERON:0001262!2.87e-08!13;UBERON:0004786!2.87e-08!13;UBERON:0001962!1.08e-07!2;UBERON:0001961!1.08e-07!2;UBERON:0001744!1.08e-07!2;UBERON:0003100!1.94e-07!11;UBERON:0004923!2.10e-07!24;UBERON:0010147!2.60e-07!2;UBERON:0003937!2.60e-07!2;UBERON:0005399!2.60e-07!2;UBERON:0003133!2.83e-07!24;UBERON:0000485!6.84e-07!11;UBERON:0001343!8.04e-07!2;UBERON:0004910!8.04e-07!2;UBERON:0004909!8.04e-07!2;UBERON:0005154!8.04e-07!2;UBERON:0005295!8.04e-07!2;UBERON:0005297!8.04e-07!2;UBERON:0005294!8.04e-07!2;UBERON:0010141!8.04e-07!2;UBERON:0005891!8.04e-07!2;UBERON:0003134!8.96e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.27e-13,2;UBERON:0001961,1.27e-13,2;UBERON:0001744,1.27e-13,2;UBERON:0010147,7.06e-13,2;UBERON:0003937,7.06e-13,2;UBERON:0005399,7.06e-13,2;UBERON:0000474,8.78e-12,9;UBERON:0000344,1.76e-10,15;UBERON:0003100,1.11e-09,11;UBERON:0002465,2.17e-09,3;UBERON:0000992,2.90e-09,3;UBERON:0005156,1.99e-08,26;UBERON:0000990,1.99e-08,26;UBERON:0000993,4.65e-08,1;UBERON:0003134,9.27e-08,8;UBERON:0003199,1.33e-07,1;UBERON:0002367,2.74e-07,1;UBERON:0009846,2.74e-07,1;UBERON:0003353,2.74e-07,1;UBERON:0004902,2.74e-07,1;UBERON:0003820,2.74e-07,1;UBERON:0009847,2.74e-07,1;UBERON:0007023,3.13e-07,51;UBERON:0000998,3.16e-07,1;UBERON:0007194,3.16e-07,1;UBERON:0006868,3.16e-07,1 | |||
|phase1_expression=0,0,0.909998478779072,0,0,1.17515490338323,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,2.06468352960453,3.44539178469012,2.58457197695445,1.72376986148711,0,0,2.66076612786366,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55492153374884,0.534196811001766,1.14020871547503,9.40329700943452,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10264199027481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,3.6630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@9930023K05Rik | |||
}} |
Revision as of 09:19, 4 August 2015
Short description: | p4@9930023K05Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_9930023K05Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3210 |
Association with transcript: | -64bp_to_ENSMUST00000039666, NM_001164263, NM_172641, uc008hyy.2, uc008hyz.2_5end |
EntrezGene: | 226245 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.21e-20 | 3 |
defensive cell | 7.09e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 1.27e-13 | 2 |
mucosa-associated lymphoid tissue | 1.27e-13 | 2 |
lymphoid tissue | 1.27e-13 | 2 |
male accessory sex gland | 7.06e-13 | 2 |
sex gland | 7.06e-13 | 2 |
male reproductive gland | 7.06e-13 | 2 |
female reproductive system | 8.78e-12 | 9 |
mucosa | 1.76e-10 | 15 |
female organism | 1.11e-09 | 11 |
lymphoid system | 2.17e-09 | 3 |
female gonad | 2.90e-09 | 3 |
reproductive structure | 1.99e-08 | 26 |
reproductive system | 1.99e-08 | 26 |
oviduct | 4.65e-08 | 1 |
female reproductive organ | 9.27e-08 | 8 |
egg chamber | 1.33e-07 | 1 |
prostate gland | 2.74e-07 | 1 |
embryonic cloacal epithelium | 2.74e-07 | 1 |
epithelium of hindgut | 2.74e-07 | 1 |
urogenital sinus epithelium | 2.74e-07 | 1 |
prostate bud | 2.74e-07 | 1 |
prostate field | 2.74e-07 | 1 |
adult organism | 3.13e-07 | 51 |
seminal vesicle | 3.16e-07 | 1 |
vesicular gland | 3.16e-07 | 1 |
seminal fluid secreting gland | 3.16e-07 | 1 |