FFCP PHASE1:Mm9::chr9:100888395..100888423,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:100888395..100888423,-|id=chr9:100888395..100888423,-|ontology_enrichment_celltype=CL:0002563!1.15e-08!9;CL:0002251!1.15e-08!9;CL:0000239!8.67e-08!6;CL:0000677!8.67e-08!6;CL:0000212!8.67e-08!6;CL:0000584!8.67e-08!6|ontology_enrichment_celltype_v019_2=CL:0002027,1.44e-10,3;CL:0002006,1.44e-10,3;CL:0002024,1.44e-10,3;CL:0002563,2.34e-09,9;CL:0002251,2.34e-09,9;CL:0000239,2.80e-09,6;CL:0000677,2.80e-09,6;CL:0000584,2.80e-09,6;CL:0000075,5.76e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!2.14e-18!24;UBERON:0000344!6.78e-16!15;UBERON:0005409!8.87e-16!59;UBERON:0000160!1.11e-14!43;UBERON:0001242!1.91e-13!13;UBERON:0000060!1.91e-13!13;UBERON:0001262!1.91e-13!13;UBERON:0004786!1.91e-13!13;UBERON:0003350!1.15e-08!9;UBERON:0004808!1.15e-08!9;UBERON:0001277!1.15e-08!9;UBERON:0000485!9.83e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.18e-26,31;UBERON:0005409,1.34e-23,47;UBERON:0004923,6.08e-22,24;UBERON:0000344,6.10e-22,15;UBERON:0001242,2.51e-16,13;UBERON:0001262,2.51e-16,13;UBERON:0004786,2.51e-16,13;UBERON:0001007,1.45e-09,116;UBERON:0001555,1.45e-09,116;UBERON:0007026,1.45e-09,116;UBERON:0003350,2.34e-09,9;UBERON:0004808,2.34e-09,9;UBERON:0001277,2.34e-09,9;UBERON:0004119,2.47e-09,118;UBERON:0000925,2.47e-09,118;UBERON:0006595,2.47e-09,118;UBERON:0002108,8.89e-09,4;UBERON:0001962,4.70e-08,2;UBERON:0001961,4.70e-08,2;UBERON:0001744,4.70e-08,2;UBERON:0000485,1.31e-07,11;UBERON:0004921,1.47e-07,114|phase1_expression=0,2.09385244583617,1.36499771816861,4.53696316960245,8.5152274090879,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,2.6648780945253,2.63217847606774,1.39912375625629,0,0,0,0,0,0,6.39969691173627,5.96464130774642,0,2.15380998079537,1.29282739611533,11.4014051673824,6.5527833737582,0.665191531965914,0,0,0,0,4.65457007003779,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,48.5368404896324,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.4928682391809,4.23120906661671,0,0.232236671860439,0,0.201683524623343,0.22237804384487,1.33157938278791,19.455691523325,0.988193728344065,0,0.397912944082302,0,11.6846523125049,28.0979464837102,39.031689557856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.120625849856312,0.358117032009409,0.164140899745061,7.28702091574627,0,1.87957968877638,0,1.29636169158798,0.565105371014073,0.546776910884101,1.60144721244566,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.256100609619477,0.287177344778066,0.476293691283074,0.231768651889711,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0,0,0,0,0|short_description=p@chr9:100888395..100888423,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:100888395..100888423,- | |||
|description=CAGE_peak_at_chr9:100888395..100888423,- | |||
|id=chr9:100888395..100888423,- | |||
|ontology_enrichment_celltype=CL:0002563!1.15e-08!9;CL:0002251!1.15e-08!9;CL:0000239!8.67e-08!6;CL:0000677!8.67e-08!6;CL:0000212!8.67e-08!6;CL:0000584!8.67e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.44e-10,3;CL:0002006,1.44e-10,3;CL:0002024,1.44e-10,3;CL:0002563,2.34e-09,9;CL:0002251,2.34e-09,9;CL:0000239,2.80e-09,6;CL:0000677,2.80e-09,6;CL:0000584,2.80e-09,6;CL:0000075,5.76e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!2.14e-18!24;UBERON:0000344!6.78e-16!15;UBERON:0005409!8.87e-16!59;UBERON:0000160!1.11e-14!43;UBERON:0001242!1.91e-13!13;UBERON:0000060!1.91e-13!13;UBERON:0001262!1.91e-13!13;UBERON:0004786!1.91e-13!13;UBERON:0003350!1.15e-08!9;UBERON:0004808!1.15e-08!9;UBERON:0001277!1.15e-08!9;UBERON:0000485!9.83e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.18e-26,31;UBERON:0005409,1.34e-23,47;UBERON:0004923,6.08e-22,24;UBERON:0000344,6.10e-22,15;UBERON:0001242,2.51e-16,13;UBERON:0001262,2.51e-16,13;UBERON:0004786,2.51e-16,13;UBERON:0001007,1.45e-09,116;UBERON:0001555,1.45e-09,116;UBERON:0007026,1.45e-09,116;UBERON:0003350,2.34e-09,9;UBERON:0004808,2.34e-09,9;UBERON:0001277,2.34e-09,9;UBERON:0004119,2.47e-09,118;UBERON:0000925,2.47e-09,118;UBERON:0006595,2.47e-09,118;UBERON:0002108,8.89e-09,4;UBERON:0001962,4.70e-08,2;UBERON:0001961,4.70e-08,2;UBERON:0001744,4.70e-08,2;UBERON:0000485,1.31e-07,11;UBERON:0004921,1.47e-07,114 | |||
|phase1_expression=0,2.09385244583617,1.36499771816861,4.53696316960245,8.5152274090879,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,2.6648780945253,2.63217847606774,1.39912375625629,0,0,0,0,0,0,6.39969691173627,5.96464130774642,0,2.15380998079537,1.29282739611533,11.4014051673824,6.5527833737582,0.665191531965914,0,0,0,0,4.65457007003779,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,48.5368404896324,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.4928682391809,4.23120906661671,0,0.232236671860439,0,0.201683524623343,0.22237804384487,1.33157938278791,19.455691523325,0.988193728344065,0,0.397912944082302,0,11.6846523125049,28.0979464837102,39.031689557856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.120625849856312,0.358117032009409,0.164140899745061,7.28702091574627,0,1.87957968877638,0,1.29636169158798,0.565105371014073,0.546776910884101,1.60144721244566,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.256100609619477,0.287177344778066,0.476293691283074,0.231768651889711,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p@chr9:100888395..100888423,- | |||
}} |
Latest revision as of 10:24, 4 August 2015
Short description: | p@chr9:100888395..100888423, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:100888395..100888423, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.44e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.44e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.44e-10 | 3 |
intestinal epithelial cell | 2.34e-09 | 9 |
epithelial cell of alimentary canal | 2.34e-09 | 9 |
brush border epithelial cell | 2.80e-09 | 6 |
gut absorptive cell | 2.80e-09 | 6 |
enterocyte | 2.80e-09 | 6 |
columnar/cuboidal epithelial cell | 5.76e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.18e-26 | 31 |
gastrointestinal system | 1.34e-23 | 47 |
organ component layer | 6.08e-22 | 24 |
mucosa | 6.10e-22 | 15 |
intestinal mucosa | 2.51e-16 | 13 |
wall of intestine | 2.51e-16 | 13 |
gastrointestinal system mucosa | 2.51e-16 | 13 |
digestive system | 1.45e-09 | 116 |
digestive tract | 1.45e-09 | 116 |
primitive gut | 1.45e-09 | 116 |
epithelium of mucosa | 2.34e-09 | 9 |
gastrointestinal system epithelium | 2.34e-09 | 9 |
intestinal epithelium | 2.34e-09 | 9 |
endoderm-derived structure | 2.47e-09 | 118 |
endoderm | 2.47e-09 | 118 |
presumptive endoderm | 2.47e-09 | 118 |
small intestine | 8.89e-09 | 4 |
gut-associated lymphoid tissue | 4.70e-08 | 2 |
mucosa-associated lymphoid tissue | 4.70e-08 | 2 |
lymphoid tissue | 4.70e-08 | 2 |
simple columnar epithelium | 1.31e-07 | 11 |
subdivision of digestive tract | 1.47e-07 | 114 |