FFCP PHASE1:Mm9::chr5:58184489..58184493,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=581|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:58184489..58184493,+|id=chr5:58184489..58184493,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!3.56e-12!23;UBERON:0001009!3.56e-12!23;UBERON:0007100!2.33e-10!18;UBERON:0000948!2.33e-10!18;UBERON:0005498!2.33e-10!18;UBERON:0004140!2.33e-10!18;UBERON:0009881!2.33e-10!18;UBERON:0004141!2.33e-10!18;UBERON:0003084!2.33e-10!18;UBERON:0007005!2.33e-10!18;UBERON:0004139!2.33e-10!18;UBERON:0004291!2.33e-10!18;UBERON:0004872!7.46e-08!33;UBERON:0000468!8.70e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.58e-29,23;UBERON:0001009,3.58e-29,23;UBERON:0007100,5.75e-28,18;UBERON:0000948,5.75e-28,18;UBERON:0005498,5.75e-28,18;UBERON:0004140,5.75e-28,18;UBERON:0009881,5.75e-28,18;UBERON:0004141,5.75e-28,18;UBERON:0003084,5.75e-28,18;UBERON:0007005,5.75e-28,18;UBERON:0004139,5.75e-28,18;UBERON:0004291,5.75e-28,18;UBERON:0004872,1.59e-19,33;UBERON:0003914,4.09e-15,47;UBERON:0003103,2.11e-10,43;UBERON:0000025,3.01e-09,114;UBERON:0004111,2.16e-08,122;UBERON:0010314,2.59e-08,92;UBERON:0003081,9.11e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,1.21652317463417,1.46837401729345,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.46081959976873,0,0.365950574409639,0,0.279182999001381,1.12552522006336,0.61119299110724,0.294628585473668,0.711858403995515,0.186399445825301,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0.599162557619291,0.915001205637253,0.125654352112864,0.347648640384553,1.27857728665165,0.41557608911912,0.486723789203273,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0.30140963567143,0.272145996605311,0.640568601424249,0.281105173679186,0.776110112217047,0,0.567318240503458,0.351902248327898,0,0.278047249225598,0,0.411564272815887,0.398068533636986,0,0,0,0.828503090142008,0.938104239924385,2.34080679899319,0.23674473558521,1.57411385397923,2.31400669331067,1.39520366850245,1.3413670069981,2.80236821681207,2.79751744852917,1.80584210487005,1.13496333364198,1.90059983652932,2.19550115291051,2.28150911892632,0.210289948564127,0.308713837137853,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0.754005626400808,0.198956472041151,0,0,0.216138049874694,0,0,0.685491075658373,0,0.203651327845314,0.775809948670503,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0.333690211432188,0,0,0,0.241177159752417,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0.37898282354097,0,0,0.469380496577004,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0.478364305972461,0.163863314715738,0,0.144649058581512,1.50791283939272,0,0.491764273019036,0,0.481651769963376,0.35163505977661,0,0,0,0.390438744296638,0,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,0,1.09060118843252,0,0,0,0,0.340439605753788,0,0.129358683782755,0.428674070063185,0,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.322928853391811,0.180938774784468,0.238744688006273,0.328281799490123,0,0.370850604021019,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0,0.432021363287205,0.836353184057875,0.87345025498471,0.674321731924103,0.495920734352016,0.523511883968059,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.314578033277133,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0.750729901804728,0.549454872801795,0.214368379079066,0,1.12950368523413,0.920650473014354,0,1.20297227640581,0,0.755393897389701,1.35004500046361,1.80128481289688,0.906284817968409,0,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.320125762024346,0.114870937911227,0,0.231768651889711,0.38581844092741,1.23625770240992,0.588795680537589,1.02860775715625,0.887379030796687,0.238436189947321,0.290692833264657,0.0941093804153306,0.423073039458382,0.548783918618318,0.263069711437843,0.543216455383447,0,0.474540072496697,0.591026894253381,0.409231043169689,0,0.192906610981141,0,0.467863216890817,0,0,0,0.463735671240843|short_description=p@chr5:58184489..58184493,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=581 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:58184489..58184493,+ | |||
|description=CAGE_peak_at_chr5:58184489..58184493,+ | |||
|id=chr5:58184489..58184493,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.56e-12!23;UBERON:0001009!3.56e-12!23;UBERON:0007100!2.33e-10!18;UBERON:0000948!2.33e-10!18;UBERON:0005498!2.33e-10!18;UBERON:0004140!2.33e-10!18;UBERON:0009881!2.33e-10!18;UBERON:0004141!2.33e-10!18;UBERON:0003084!2.33e-10!18;UBERON:0007005!2.33e-10!18;UBERON:0004139!2.33e-10!18;UBERON:0004291!2.33e-10!18;UBERON:0004872!7.46e-08!33;UBERON:0000468!8.70e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.58e-29,23;UBERON:0001009,3.58e-29,23;UBERON:0007100,5.75e-28,18;UBERON:0000948,5.75e-28,18;UBERON:0005498,5.75e-28,18;UBERON:0004140,5.75e-28,18;UBERON:0009881,5.75e-28,18;UBERON:0004141,5.75e-28,18;UBERON:0003084,5.75e-28,18;UBERON:0007005,5.75e-28,18;UBERON:0004139,5.75e-28,18;UBERON:0004291,5.75e-28,18;UBERON:0004872,1.59e-19,33;UBERON:0003914,4.09e-15,47;UBERON:0003103,2.11e-10,43;UBERON:0000025,3.01e-09,114;UBERON:0004111,2.16e-08,122;UBERON:0010314,2.59e-08,92;UBERON:0003081,9.11e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,1.21652317463417,1.46837401729345,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.46081959976873,0,0.365950574409639,0,0.279182999001381,1.12552522006336,0.61119299110724,0.294628585473668,0.711858403995515,0.186399445825301,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0.599162557619291,0.915001205637253,0.125654352112864,0.347648640384553,1.27857728665165,0.41557608911912,0.486723789203273,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0.30140963567143,0.272145996605311,0.640568601424249,0.281105173679186,0.776110112217047,0,0.567318240503458,0.351902248327898,0,0.278047249225598,0,0.411564272815887,0.398068533636986,0,0,0,0.828503090142008,0.938104239924385,2.34080679899319,0.23674473558521,1.57411385397923,2.31400669331067,1.39520366850245,1.3413670069981,2.80236821681207,2.79751744852917,1.80584210487005,1.13496333364198,1.90059983652932,2.19550115291051,2.28150911892632,0.210289948564127,0.308713837137853,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0.754005626400808,0.198956472041151,0,0,0.216138049874694,0,0,0.685491075658373,0,0.203651327845314,0.775809948670503,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0.333690211432188,0,0,0,0.241177159752417,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0.37898282354097,0,0,0.469380496577004,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0.478364305972461,0.163863314715738,0,0.144649058581512,1.50791283939272,0,0.491764273019036,0,0.481651769963376,0.35163505977661,0,0,0,0.390438744296638,0,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,0,1.09060118843252,0,0,0,0,0.340439605753788,0,0.129358683782755,0.428674070063185,0,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.322928853391811,0.180938774784468,0.238744688006273,0.328281799490123,0,0.370850604021019,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0,0.432021363287205,0.836353184057875,0.87345025498471,0.674321731924103,0.495920734352016,0.523511883968059,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.314578033277133,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0.750729901804728,0.549454872801795,0.214368379079066,0,1.12950368523413,0.920650473014354,0,1.20297227640581,0,0.755393897389701,1.35004500046361,1.80128481289688,0.906284817968409,0,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.320125762024346,0.114870937911227,0,0.231768651889711,0.38581844092741,1.23625770240992,0.588795680537589,1.02860775715625,0.887379030796687,0.238436189947321,0.290692833264657,0.0941093804153306,0.423073039458382,0.548783918618318,0.263069711437843,0.543216455383447,0,0.474540072496697,0.591026894253381,0.409231043169689,0,0.192906610981141,0,0.467863216890817,0,0,0,0.463735671240843 | |||
|short_description=p@chr5:58184489..58184493,+ | |||
}} |
Latest revision as of 11:56, 4 August 2015
Short description: | p@chr5:58184489..58184493, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:58184489..58184493, + |
Coexpression cluster: | MCL_coexpression_mm9:581 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.58e-29 | 23 |
circulatory system | 3.58e-29 | 23 |
primary circulatory organ | 5.75e-28 | 18 |
heart | 5.75e-28 | 18 |
primitive heart tube | 5.75e-28 | 18 |
primary heart field | 5.75e-28 | 18 |
anterior lateral plate mesoderm | 5.75e-28 | 18 |
heart tube | 5.75e-28 | 18 |
heart primordium | 5.75e-28 | 18 |
cardiac mesoderm | 5.75e-28 | 18 |
cardiogenic plate | 5.75e-28 | 18 |
heart rudiment | 5.75e-28 | 18 |
splanchnic layer of lateral plate mesoderm | 1.59e-19 | 33 |
epithelial tube | 4.09e-15 | 47 |
compound organ | 2.11e-10 | 43 |
tube | 3.01e-09 | 114 |
anatomical conduit | 2.16e-08 | 122 |
structure with developmental contribution from neural crest | 2.59e-08 | 92 |
lateral plate mesoderm | 9.11e-07 | 87 |