FFCP PHASE1:Mm9::chr19:6112886..6112902,+: Difference between revisions
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|id=chr19:6112886..6112902,+
|short_description=p@chr19:6112886..6112902,+
|description=CAGE_peak_at_chr19:6112886..6112902,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=131 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:6112886..6112902,+ | |||
|description=CAGE_peak_at_chr19:6112886..6112902,+ | |||
|id=chr19:6112886..6112902,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.54e-15!6;CL:0000677!5.54e-15!6;CL:0000212!5.54e-15!6;CL:0000584!5.54e-15!6;CL:0000075!9.54e-13!7;CL:0002563!9.21e-10!9;CL:0002251!9.21e-10!9;CL:0000473!1.05e-08!3;CL:0000627!1.05e-08!3;CL:0000682!1.05e-08!3;CL:0000066!6.83e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.37e-12,6;CL:0000677,1.37e-12,6;CL:0000584,1.37e-12,6;CL:0000075,8.07e-11,7;CL:0002563,1.89e-08,9;CL:0002251,1.89e-08,9;CL:0000682,2.53e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.10e-27!43;UBERON:0000344!1.78e-23!15;UBERON:0005409!3.81e-20!59;UBERON:0001242!1.26e-18!13;UBERON:0000060!1.26e-18!13;UBERON:0001262!1.26e-18!13;UBERON:0004786!1.26e-18!13;UBERON:0004923!5.58e-16!24;UBERON:0003350!9.21e-10!9;UBERON:0004808!9.21e-10!9;UBERON:0001277!9.21e-10!9;UBERON:0000331!2.32e-09!3;UBERON:0002116!2.32e-09!3;UBERON:0001204!2.32e-09!3;UBERON:0001168!2.32e-09!3;UBERON:0004119!8.46e-09!130;UBERON:0000925!8.46e-09!130;UBERON:0006595!8.46e-09!130;UBERON:0001007!3.68e-08!128;UBERON:0001555!3.68e-08!128;UBERON:0007026!3.68e-08!128;UBERON:0000485!7.33e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.39e-31,31;UBERON:0000344,1.00e-24,15;UBERON:0005409,4.36e-20,47;UBERON:0002108,4.44e-20,4;UBERON:0001242,2.64e-17,13;UBERON:0001262,2.64e-17,13;UBERON:0004786,2.64e-17,13;UBERON:0000331,1.54e-15,3;UBERON:0002116,1.54e-15,3;UBERON:0001204,1.54e-15,3;UBERON:0001168,1.54e-15,3;UBERON:0004923,5.26e-15,24;UBERON:0001962,8.31e-11,2;UBERON:0001961,8.31e-11,2;UBERON:0001744,8.31e-11,2;UBERON:0001007,3.19e-09,116;UBERON:0001555,3.19e-09,116;UBERON:0007026,3.19e-09,116;UBERON:0004119,5.08e-09,118;UBERON:0000925,5.08e-09,118;UBERON:0006595,5.08e-09,118;UBERON:0003350,1.89e-08,9;UBERON:0004808,1.89e-08,9;UBERON:0001277,1.89e-08,9;UBERON:0002465,1.76e-07,3;UBERON:0000485,6.15e-07,11;UBERON:0004921,6.81e-07,114 | |||
|phase1_expression=0,1.39590163055744,2.27499619694768,1.81478526784098,2.00358291978539,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.2940928106717,1.72269589234506,0.86152399231815,3.01659725760245,35.3443560188855,2.01624103807945,3.99114919179548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0.201683524623343,1.11189021922435,0.380451252225118,0.949058123089023,1.64698954724011,1.00534083520108,0.596869416123452,1.36474860983384,2.69645822596266,0.864552199498777,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,1.39590163055744,2.27499619694768,1.81478526784098,2.00358291978539,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.2940928106717,1.72269589234506,0.86152399231815,3.01659725760245,35.3443560188855,2.01624103807945,3.99114919179548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0.201683524623343,1.11189021922435,0.380451252225118,0.949058123089023,1.64698954724011,1.00534083520108,0.596869416123452,1.36474860983384,2.69645822596266,0.864552199498777,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr19:6112886..6112902,+ | |||
}} | }} |
Latest revision as of 11:58, 4 August 2015
Short description: | p@chr19:6112886..6112902, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6112886..6112902, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.37e-12 | 6 |
gut absorptive cell | 1.37e-12 | 6 |
enterocyte | 1.37e-12 | 6 |
columnar/cuboidal epithelial cell | 8.07e-11 | 7 |
intestinal epithelial cell | 1.89e-08 | 9 |
epithelial cell of alimentary canal | 1.89e-08 | 9 |
M cell of gut | 2.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.39e-31 | 31 |
mucosa | 1.00e-24 | 15 |
gastrointestinal system | 4.36e-20 | 47 |
small intestine | 4.44e-20 | 4 |
intestinal mucosa | 2.64e-17 | 13 |
wall of intestine | 2.64e-17 | 13 |
gastrointestinal system mucosa | 2.64e-17 | 13 |
ileal mucosa | 1.54e-15 | 3 |
ileum | 1.54e-15 | 3 |
mucosa of small intestine | 1.54e-15 | 3 |
wall of small intestine | 1.54e-15 | 3 |
organ component layer | 5.26e-15 | 24 |
gut-associated lymphoid tissue | 8.31e-11 | 2 |
mucosa-associated lymphoid tissue | 8.31e-11 | 2 |
lymphoid tissue | 8.31e-11 | 2 |
digestive system | 3.19e-09 | 116 |
digestive tract | 3.19e-09 | 116 |
primitive gut | 3.19e-09 | 116 |
endoderm-derived structure | 5.08e-09 | 118 |
endoderm | 5.08e-09 | 118 |
presumptive endoderm | 5.08e-09 | 118 |
epithelium of mucosa | 1.89e-08 | 9 |
gastrointestinal system epithelium | 1.89e-08 | 9 |
intestinal epithelium | 1.89e-08 | 9 |
lymphoid system | 1.76e-07 | 3 |
simple columnar epithelium | 6.15e-07 | 11 |
subdivision of digestive tract | 6.81e-07 | 114 |