FFCP PHASE1:Mm9::chr19:7684955..7684973,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=54 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:7684955..7684973,- | |||
|description=CAGE_peak_at_chr19:7684955..7684973,- | |description=CAGE_peak_at_chr19:7684955..7684973,- | ||
|id=chr19:7684955..7684973,- | |id=chr19:7684955..7684973,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,5.14e-15,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.13e-16!59;UBERON:0000344!8.93e-14!15;UBERON:0001242!4.73e-11!13;UBERON:0000060!4.73e-11!13;UBERON:0001262!4.73e-11!13;UBERON:0004786!4.73e-11!13;UBERON:0000160!5.47e-10!43;UBERON:0001007!1.81e-08!128;UBERON:0001555!1.81e-08!128;UBERON:0007026!1.81e-08!128;UBERON:0004119!3.44e-08!130;UBERON:0000925!3.44e-08!130;UBERON:0006595!3.44e-08!130;UBERON:0004923!1.96e-07!24;UBERON:0000014!2.90e-07!5;UBERON:0001003!2.90e-07!5;UBERON:0002097!2.90e-07!5;UBERON:0002199!2.90e-07!5;UBERON:0007029!2.90e-07!5;UBERON:0007376!2.90e-07!5;UBERON:0002416!2.90e-07!5;UBERON:0007383!2.90e-07!5;UBERON:0004921!3.05e-07!126;UBERON:0004185!3.05e-07!126;UBERON:0000945!3.24e-07!16;UBERON:0010039!3.24e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.76e-23,47;UBERON:0000945,2.61e-14,16;UBERON:0010039,2.61e-14,16;UBERON:0001007,3.86e-12,116;UBERON:0001555,3.86e-12,116;UBERON:0007026,3.86e-12,116;UBERON:0004119,6.88e-12,118;UBERON:0000925,6.88e-12,118;UBERON:0006595,6.88e-12,118;UBERON:0000160,7.12e-11,31;UBERON:0000344,1.15e-10,15;UBERON:0001155,2.22e-10,2;UBERON:0000059,2.22e-10,2;UBERON:0001962,7.15e-10,2;UBERON:0001961,7.15e-10,2;UBERON:0001744,7.15e-10,2;UBERON:0004921,1.55e-09,114;UBERON:0002465,7.29e-07,3 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,1.60586496747019,0,0.430761996159075,0.646413698057667,0.950117097281869,0.756090389279792,1.10865255327652,0,0,0,6.93243887403059,3.49092755252834,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0.216491041011214,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.779856348476481,0,1.94524244887225,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.322928853391811,0.301564624640779,0.477489376012546,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,76.3736494412091,0,0.203319467126849,0.108005340821801,2.09088296014469,6.76923947613151,10.2496903252464,9.91841468704031,20.4169634747543,5.05498395837992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,3.00115730710692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,1.60586496747019,0,0.430761996159075,0.646413698057667,0.950117097281869,0.756090389279792,1.10865255327652,0,0,0,6.93243887403059,3.49092755252834,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0.216491041011214,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0474232852686,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.779856348476481,0,1.94524244887225,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.322928853391811,0.301564624640779,0.477489376012546,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,76.3736494412091,0,0.203319467126849,0.108005340821801,2.09088296014469,6.76923947613151,10.2496903252464,9.91841468704031,20.4169634747543,5.05498395837992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,3.00115730710692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0 | ||
|short_description=p@chr19:7684955..7684973,- | |short_description=p@chr19:7684955..7684973,- | ||
}} | }} |
Latest revision as of 13:32, 4 August 2015
Short description: | p@chr19:7684955..7684973, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:7684955..7684973, - |
Coexpression cluster: | MCL_coexpression_mm9:54 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 5.14e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.76e-23 | 47 |
stomach | 2.61e-14 | 16 |
food storage organ | 2.61e-14 | 16 |
digestive system | 3.86e-12 | 116 |
digestive tract | 3.86e-12 | 116 |
primitive gut | 3.86e-12 | 116 |
endoderm-derived structure | 6.88e-12 | 118 |
endoderm | 6.88e-12 | 118 |
presumptive endoderm | 6.88e-12 | 118 |
intestine | 7.12e-11 | 31 |
mucosa | 1.15e-10 | 15 |
colon | 2.22e-10 | 2 |
large intestine | 2.22e-10 | 2 |
gut-associated lymphoid tissue | 7.15e-10 | 2 |
mucosa-associated lymphoid tissue | 7.15e-10 | 2 |
lymphoid tissue | 7.15e-10 | 2 |
subdivision of digestive tract | 1.55e-09 | 114 |
lymphoid system | 7.29e-07 | 3 |