FFCP PHASE1:Mm9::chr9:108757017..108757037,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:108757017..108757037,+ | |||
|description=CAGE_peak_at_chr9:108757017..108757037,+ | |description=CAGE_peak_at_chr9:108757017..108757037,+ | ||
|id=chr9:108757017..108757037,+ | |id=chr9:108757017..108757037,+ | ||
|ontology_enrichment_celltype=CL:0002563!6.56e-07!9;CL:0002251!6.56e-07!9 | |ontology_enrichment_celltype=CL:0002563!6.56e-07!9;CL:0002251!6.56e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.32e-12,6;CL:0000677,2.32e-12,6;CL:0000584,2.32e-12,6;CL:0000075,1.84e-10,7;CL:0002563,2.65e-10,9;CL:0002251,2.65e-10,9;CL:0000682,3.72e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.71e-21!43;UBERON:0005409!4.47e-17!59;UBERON:0000344!2.44e-11!15;UBERON:0001242!6.16e-10!13;UBERON:0000060!6.16e-10!13;UBERON:0001262!6.16e-10!13;UBERON:0004786!6.16e-10!13;UBERON:0002108!7.63e-08!16;UBERON:0003350!6.56e-07!9;UBERON:0004808!6.56e-07!9;UBERON:0001277!6.56e-07!9;UBERON:0000485!8.14e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.04e-35,31;UBERON:0005409,1.05e-24,47;UBERON:0000344,4.20e-21,15;UBERON:0001242,1.30e-17,13;UBERON:0001262,1.30e-17,13;UBERON:0004786,1.30e-17,13;UBERON:0001264,1.19e-12,12;UBERON:0004923,6.48e-12,24;UBERON:0003350,2.65e-10,9;UBERON:0004808,2.65e-10,9;UBERON:0001277,2.65e-10,9;UBERON:0002108,5.88e-09,4;UBERON:0000485,3.31e-08,11;UBERON:0001007,3.61e-08,116;UBERON:0001555,3.61e-08,116;UBERON:0007026,3.61e-08,116;UBERON:0004119,6.60e-08,118;UBERON:0000925,6.60e-08,118;UBERON:0006595,6.60e-08,118;UBERON:0002075,2.85e-07,19;UBERON:0000331,2.95e-07,3;UBERON:0002116,2.95e-07,3;UBERON:0001204,2.95e-07,3;UBERON:0001168,2.95e-07,3;UBERON:0004921,8.03e-07,114 | |||
|phase1_expression=0.160148847104794,28.6159834264276,33.6699437148257,34.7833843002855,45.5815114251176,4.70061961353291,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,17.2791816616879,21.564472420314,32.7312219545562,28.861053742658,21.331652035903,45.7956440889861,37.3004592044698,9.75614246883341,0,0.61506478758457,0,0.577703239502549,1.82858109894342,0.816677425049476,0,0,0,0,0,0,0,0.202753862439029,0,0.782391344348039,0.872100625521786,0.659058548203415,0.194429899074283,0.55994568650145,0,0.167782606057736,0,0,0,0.573066879877513,0,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0.898800331555214,2.30530983192933,0,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0,0.186399445825301,0.075726193333184,0.302286240427142,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0.448026887097336,1.26399978118577,0.170430322578058,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,4.45317130904334,0,0,0.173485326766136,0.608930956624282,0.461230994512117,0.452167921657868,0.117588707135705,0.125666591329675,0.741584903203122,0.144599356919912,0,0,0,0,0,0.292780797011547,0.41889341362691,23.5020490791904,0,0,0.127070227073065,0.299581278809645,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0.841767423545896,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0.810688095458557,1.02339991197733,0.878200461164203,1.20785776884335,0.210289948564127,0.102904612379284,44.9369544857965,14.2803305998314,0,0.232236671860439,0.77320476793256,4.03367049246685,3.7804267453628,6.84812254005213,22.302865892592,10.2113351928887,3.01602250560323,4.17808591286417,3.70431765526328,25.1669434423182,25.2881518353392,21.706398784726,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.379419222745544,0.590440591918409,0.31399745568275,1.35736880313981,0.592905254174298,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0.505157755894224,0.717589654087649,0.964887042726734,0,0,0,0,0,0.167506257441816,0.714130922658041,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0.321101179975584,0.234423373184406,0,0.757412781613119,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0,0,0.178065603667255,0,0.164970122972535,5.30980553359851,0,0,2.07465587731488,1.47650946440386,2.15204603560749,3.10113951801865,1.45413491791002,1.06949213515416,4.74055136903724,4.21674434299995,4.12542172992747,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0,0,14.2825609948627,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.41326727862668,2.09404753587224,0,3.10669656543463,0.56369293868419,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.187283014939765,0.192075457214608,0.459483751644906,0,0.695305955669133,0.38581844092741,0,0.735994600671987,0.342869252385415,0.532427418478012,0.953744759789284,0,0.376437521661322,0.25384382367503,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0,0.701794825336225,0,0,0,0 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|phase1_expression=0.160148847104794,28.6159834264276,33.6699437148257,34.7833843002855,45.5815114251176,4.70061961353291,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,17.2791816616879,21.564472420314,32.7312219545562,28.861053742658,21.331652035903,45.7956440889861,37.3004592044698,9.75614246883341,0,0.61506478758457,0,0.577703239502549,1.82858109894342,0.816677425049476,0,0,0,0,0,0,0,0.202753862439029,0,0.782391344348039,0.872100625521786,0.659058548203415,0.194429899074283,0.55994568650145,0,0.167782606057736,0,0,0,0.573066879877513,0,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0.898800331555214,2.30530983192933,0,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0,0.186399445825301,0.075726193333184,0.302286240427142,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0.448026887097336,1.26399978118577,0.170430322578058,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,4.45317130904334,0,0,0.173485326766136,0.608930956624282,0.461230994512117,0.452167921657868,0.117588707135705,0.125666591329675,0.741584903203122,0.144599356919912,0,0,0,0,0,0.292780797011547,0.41889341362691,23.5020490791904,0,0,0.127070227073065,0.299581278809645,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0.841767423545896,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0.810688095458557,1.02339991197733,0.878200461164203,1.20785776884335,0.210289948564127,0.102904612379284,44.9369544857965,14.2803305998314,0,0.232236671860439,0.77320476793256,4.03367049246685,3.7804267453628,6.84812254005213,22.302865892592,10.2113351928887,3.01602250560323,4.17808591286417,3.70431765526328,25.1669434423182,25.2881518353392,21.706398784726,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.379419222745544,0.590440591918409,0.31399745568275,1.35736880313981,0.592905254174298,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0.505157755894224,0.717589654087649,0.964887042726734,0,0,0,0,0,0.167506257441816,0.714130922658041,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0.321101179975584,0.234423373184406,0,0.757412781613119,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0,0,0.178065603667255,0,0.164970122972535,5.30980553359851,0,0,2.07465587731488,1.47650946440386,2.15204603560749,3.10113951801865,1.45413491791002,1.06949213515416,4.74055136903724,4.21674434299995,4.12542172992747,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0,0,14.2825609948627,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.41326727862668,2.09404753587224,0,3.10669656543463,0.56369293868419,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.187283014939765,0.192075457214608,0.459483751644906,0,0.695305955669133,0.38581844092741,0,0.735994600671987,0.342869252385415,0.532427418478012,0.953744759789284,0,0.376437521661322,0.25384382367503,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0,0.701794825336225,0,0,0,0 | ||
|short_description=p@chr9:108757017..108757037,+ | |short_description=p@chr9:108757017..108757037,+ | ||
}} | }} |
Latest revision as of 14:05, 4 August 2015
Short description: | p@chr9:108757017..108757037, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:108757017..108757037, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.32e-12 | 6 |
gut absorptive cell | 2.32e-12 | 6 |
enterocyte | 2.32e-12 | 6 |
columnar/cuboidal epithelial cell | 1.84e-10 | 7 |
intestinal epithelial cell | 2.65e-10 | 9 |
epithelial cell of alimentary canal | 2.65e-10 | 9 |
M cell of gut | 3.72e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.04e-35 | 31 |
gastrointestinal system | 1.05e-24 | 47 |
mucosa | 4.20e-21 | 15 |
intestinal mucosa | 1.30e-17 | 13 |
wall of intestine | 1.30e-17 | 13 |
gastrointestinal system mucosa | 1.30e-17 | 13 |
pancreas | 1.19e-12 | 12 |
organ component layer | 6.48e-12 | 24 |
epithelium of mucosa | 2.65e-10 | 9 |
gastrointestinal system epithelium | 2.65e-10 | 9 |
intestinal epithelium | 2.65e-10 | 9 |
small intestine | 5.88e-09 | 4 |
simple columnar epithelium | 3.31e-08 | 11 |
digestive system | 3.61e-08 | 116 |
digestive tract | 3.61e-08 | 116 |
primitive gut | 3.61e-08 | 116 |
endoderm-derived structure | 6.60e-08 | 118 |
endoderm | 6.60e-08 | 118 |
presumptive endoderm | 6.60e-08 | 118 |
viscus | 2.85e-07 | 19 |
ileal mucosa | 2.95e-07 | 3 |
ileum | 2.95e-07 | 3 |
mucosa of small intestine | 2.95e-07 | 3 |
wall of small intestine | 2.95e-07 | 3 |
subdivision of digestive tract | 8.03e-07 | 114 |