FFCP PHASE1:Mm9::chr9:108757945..108757979,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:108757945..108757979,+ | |||
|description=CAGE_peak_at_chr9:108757945..108757979,+ | |description=CAGE_peak_at_chr9:108757945..108757979,+ | ||
|id=chr9:108757945..108757979,+ | |id=chr9:108757945..108757979,+ | ||
|ontology_enrichment_celltype=CL:0000239!4.71e-13!6;CL:0000677!4.71e-13!6;CL:0000212!4.71e-13!6;CL:0000584!4.71e-13!6;CL:0002563!3.13e-11!9;CL:0002251!3.13e-11!9;CL:0000075!4.57e-11!7;CL:0000473!2.63e-07!3;CL:0000627!2.63e-07!3;CL:0000682!2.63e-07!3;CL:0000066!6.81e-07!25 | |ontology_enrichment_celltype=CL:0000239!4.71e-13!6;CL:0000677!4.71e-13!6;CL:0000212!4.71e-13!6;CL:0000584!4.71e-13!6;CL:0002563!3.13e-11!9;CL:0002251!3.13e-11!9;CL:0000075!4.57e-11!7;CL:0000473!2.63e-07!3;CL:0000627!2.63e-07!3;CL:0000682!2.63e-07!3;CL:0000066!6.81e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.37e-17,6;CL:0000677,7.37e-17,6;CL:0000584,7.37e-17,6;CL:0000075,1.97e-14,7;CL:0000682,1.70e-12,3;CL:0002563,3.46e-11,9;CL:0002251,3.46e-11,9;CL:0000066,2.83e-09,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.84e-23!43;UBERON:0000344!8.37e-23!15;UBERON:0001242!6.43e-19!13;UBERON:0000060!6.43e-19!13;UBERON:0001262!6.43e-19!13;UBERON:0004786!6.43e-19!13;UBERON:0005409!2.08e-15!59;UBERON:0004923!5.13e-13!24;UBERON:0003350!3.13e-11!9;UBERON:0004808!3.13e-11!9;UBERON:0001277!3.13e-11!9;UBERON:0001007!1.32e-09!128;UBERON:0001555!1.32e-09!128;UBERON:0007026!1.32e-09!128;UBERON:0004119!2.44e-09!130;UBERON:0000925!2.44e-09!130;UBERON:0006595!2.44e-09!130;UBERON:0000485!5.69e-09!11;UBERON:0004921!4.57e-08!126;UBERON:0004185!4.57e-08!126;UBERON:0000331!2.17e-07!3;UBERON:0002116!2.17e-07!3;UBERON:0001204!2.17e-07!3;UBERON:0001168!2.17e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.81e-31,31;UBERON:0000344,3.63e-31,15;UBERON:0001242,3.14e-24,13;UBERON:0001262,3.14e-24,13;UBERON:0004786,3.14e-24,13;UBERON:0005409,7.86e-20,47;UBERON:0004923,8.13e-19,24;UBERON:0002108,4.31e-16,4;UBERON:0000331,1.18e-12,3;UBERON:0002116,1.18e-12,3;UBERON:0001204,1.18e-12,3;UBERON:0001168,1.18e-12,3;UBERON:0003350,3.46e-11,9;UBERON:0004808,3.46e-11,9;UBERON:0001277,3.46e-11,9;UBERON:0000485,4.06e-09,11;UBERON:0001962,4.71e-09,2;UBERON:0001961,4.71e-09,2;UBERON:0001744,4.71e-09,2;UBERON:0001007,1.65e-08,116;UBERON:0001555,1.65e-08,116;UBERON:0007026,1.65e-08,116;UBERON:0004119,2.61e-08,118;UBERON:0000925,2.61e-08,118;UBERON:0006595,2.61e-08,118 | |||
|phase1_expression=0,4.88565570695105,5.91499011206397,17.845388467103,14.0250804384977,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1996590257033,8.48814339948529,9.18771142584032,3.87685796543167,3.878482188346,12.5415456841207,7.05684363327806,1.77384408524244,0,0,0,0,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0501380364725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,47.5803047496669,9.25576983322405,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,9.01605216934572,0.164698954724011,0,0.198956472041151,0.19496408711912,10.7858329038507,9.07779809473716,17.1261494998756,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0.823684239564244,0,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,4.88565570695105,5.91499011206397,17.845388467103,14.0250804384977,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1996590257033,8.48814339948529,9.18771142584032,3.87685796543167,3.878482188346,12.5415456841207,7.05684363327806,1.77384408524244,0,0,0,0,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0501380364725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,47.5803047496669,9.25576983322405,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,9.01605216934572,0.164698954724011,0,0.198956472041151,0.19496408711912,10.7858329038507,9.07779809473716,17.1261494998756,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0.823684239564244,0,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:108757945..108757979,+ | |short_description=p@chr9:108757945..108757979,+ | ||
}} | }} |
Latest revision as of 14:06, 4 August 2015
Short description: | p@chr9:108757945..108757979, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:108757945..108757979, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.37e-17 | 6 |
gut absorptive cell | 7.37e-17 | 6 |
enterocyte | 7.37e-17 | 6 |
columnar/cuboidal epithelial cell | 1.97e-14 | 7 |
M cell of gut | 1.70e-12 | 3 |
intestinal epithelial cell | 3.46e-11 | 9 |
epithelial cell of alimentary canal | 3.46e-11 | 9 |
epithelial cell | 2.83e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.81e-31 | 31 |
mucosa | 3.63e-31 | 15 |
intestinal mucosa | 3.14e-24 | 13 |
wall of intestine | 3.14e-24 | 13 |
gastrointestinal system mucosa | 3.14e-24 | 13 |
gastrointestinal system | 7.86e-20 | 47 |
organ component layer | 8.13e-19 | 24 |
small intestine | 4.31e-16 | 4 |
ileal mucosa | 1.18e-12 | 3 |
ileum | 1.18e-12 | 3 |
mucosa of small intestine | 1.18e-12 | 3 |
wall of small intestine | 1.18e-12 | 3 |
epithelium of mucosa | 3.46e-11 | 9 |
gastrointestinal system epithelium | 3.46e-11 | 9 |
intestinal epithelium | 3.46e-11 | 9 |
simple columnar epithelium | 4.06e-09 | 11 |
gut-associated lymphoid tissue | 4.71e-09 | 2 |
mucosa-associated lymphoid tissue | 4.71e-09 | 2 |
lymphoid tissue | 4.71e-09 | 2 |
digestive system | 1.65e-08 | 116 |
digestive tract | 1.65e-08 | 116 |
primitive gut | 1.65e-08 | 116 |
endoderm-derived structure | 2.61e-08 | 118 |
endoderm | 2.61e-08 | 118 |
presumptive endoderm | 2.61e-08 | 118 |