FFCP PHASE1:Mm9::chr14:63761553..63761563,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:63761553..63761563,- | |||
|description=CAGE_peak_at_chr14:63761553..63761563,- | |||
|id=chr14:63761553..63761563,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,3.76e-18,3;CL:0002540,3.76e-18,3;CL:0002194,1.50e-13,4;CL:0000766,1.50e-13,4;CL:0000234,1.50e-13,4;CL:0000576,1.50e-13,4;CL:0000235,1.50e-13,4;CL:0000864,1.50e-13,4;CL:0002009,1.50e-13,4;CL:0000040,1.50e-13,4;CL:0000559,1.50e-13,4;CL:0002476,1.56e-12,2;CL:0000473,5.82e-08,7;CL:0000557,5.82e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.32e-17,3;UBERON:0000478,4.32e-17,3;UBERON:0000158,4.32e-17,3;UBERON:0005795,3.55e-13,4;UBERON:0000995,3.55e-13,4;UBERON:0002371,1.07e-12,16;UBERON:0001987,6.40e-12,2;UBERON:0003124,6.40e-12,2;UBERON:0004340,6.40e-12,2;UBERON:0003975,1.19e-10,5;UBERON:0001474,4.03e-09,22;UBERON:0004765,4.03e-09,22;UBERON:0001434,4.03e-09,22;UBERON:0002204,3.97e-08,32;UBERON:0006834,4.10e-07,1;UBERON:0003134,7.68e-07,8;UBERON:0000305,7.89e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.198581902401771,0,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608261587317087,0.917733760808408,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,1.14613375975503,0,0,0.528990979272033,0,0.338844532069132,0,3.1496490104849,7.9109309005358,5.6838409195688,1.79760066311043,0.768436610643109,0,0,0,0,0.662605622854841,0,0,0,0,0,0.307213066512487,0.131886287730194,0,0,0.558365998002762,0,0.45839474333043,0,0.142371680799103,0,0.302904773332736,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0.170430322578058,1.03914401841148,0.35333957451034,0,0,0,0,0.865964164044856,0,0,0.34255163915718,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,1.48316980640624,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.585561594023094,0.41889341362691,0.510914110417183,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0.486723789203273,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0,0,0.215567992932842,0,0,0.43839146485515,0,0,0,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0,0,0.32833492815819,0.0810688095458557,0.438599962275997,0.439100230582101,0.402619256281115,0,0,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0.951128130562796,0.474529061544512,0.658795818896044,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,1.08069024937347,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0.889357881261447,0.166845105716094,0.196558995113203,0,0.202860121388503,0.72353147925725,1.2731292589071,0.287696137450811,0.648540907100142,1.37280706594041,1.43768206527355,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,12.0633027151418,1.63171705145613,0.491764273019036,0,0.481651769963376,0,0,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0.494910368917606,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0.304464949114599,1.17335854031855,1.69465656691056,0.220528398054962,0,0,0.0603129249281559,0.596861720015682,0.164140899745061,0,0,0.854354403989263,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,4.69206188627955,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0,0,0,0.128050304809739,0,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0.661774257358546,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.198581902401771,0,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608261587317087,0.917733760808408,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,1.14613375975503,0,0,0.528990979272033,0,0.338844532069132,0,3.1496490104849,7.9109309005358,5.6838409195688,1.79760066311043,0.768436610643109,0,0,0,0,0.662605622854841,0,0,0,0,0,0.307213066512487,0.131886287730194,0,0,0.558365998002762,0,0.45839474333043,0,0.142371680799103,0,0.302904773332736,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0.170430322578058,1.03914401841148,0.35333957451034,0,0,0,0,0.865964164044856,0,0,0.34255163915718,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,1.48316980640624,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.585561594023094,0.41889341362691,0.510914110417183,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0.486723789203273,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0,0,0.215567992932842,0,0,0.43839146485515,0,0,0,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0,0,0.32833492815819,0.0810688095458557,0.438599962275997,0.439100230582101,0.402619256281115,0,0,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0.951128130562796,0.474529061544512,0.658795818896044,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,1.08069024937347,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0.889357881261447,0.166845105716094,0.196558995113203,0,0.202860121388503,0.72353147925725,1.2731292589071,0.287696137450811,0.648540907100142,1.37280706594041,1.43768206527355,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,12.0633027151418,1.63171705145613,0.491764273019036,0,0.481651769963376,0,0,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0.494910368917606,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0.304464949114599,1.17335854031855,1.69465656691056,0.220528398054962,0,0,0.0603129249281559,0.596861720015682,0.164140899745061,0,0,0.854354403989263,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,4.69206188627955,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0,0,0,0.128050304809739,0,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0.661774257358546,0 | ||
|short_description=p@chr14:63761553..63761563,- | |||
}} | }} |
Latest revision as of 15:14, 4 August 2015
Short description: | p@chr14:63761553..63761563, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:63761553..63761563, - |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 3.76e-18 | 3 |
mesenchymal stem cell of the bone marrow | 3.76e-18 | 3 |
monopoietic cell | 1.50e-13 | 4 |
myeloid leukocyte | 1.50e-13 | 4 |
phagocyte | 1.50e-13 | 4 |
monocyte | 1.50e-13 | 4 |
macrophage | 1.50e-13 | 4 |
tissue-resident macrophage | 1.50e-13 | 4 |
macrophage dendritic cell progenitor | 1.50e-13 | 4 |
monoblast | 1.50e-13 | 4 |
promonocyte | 1.50e-13 | 4 |
bone marrow macrophage | 1.56e-12 | 2 |
defensive cell | 5.82e-08 | 7 |
granulocyte monocyte progenitor cell | 5.82e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.32e-17 | 3 |
extraembryonic structure | 4.32e-17 | 3 |
membranous layer | 4.32e-17 | 3 |
embryonic uterus | 3.55e-13 | 4 |
uterus | 3.55e-13 | 4 |
bone marrow | 1.07e-12 | 16 |
placenta | 6.40e-12 | 2 |
chorion | 6.40e-12 | 2 |
allantois | 6.40e-12 | 2 |
internal female genitalia | 1.19e-10 | 5 |
bone element | 4.03e-09 | 22 |
skeletal element | 4.03e-09 | 22 |
skeletal system | 4.03e-09 | 22 |
musculoskeletal system | 3.97e-08 | 32 |
uterus or analog | 4.10e-07 | 1 |
female reproductive organ | 7.68e-07 | 8 |
amnion | 7.89e-07 | 1 |