FFCP PHASE1:Mm9::chr4:118781341..118781363,+: Difference between revisions
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{{FFCP|EntrezGene=20525|HGNC=|UniProt=P17809|association_with_transcript=0bp_to_NM_011400,uc008ule.2_5end|description=CAGE_peak_2_at_Slc2a1_5end|id=chr4:118781341..118781363,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.86e-07!63;UBERON:0002346!4.96e-07!71;UBERON:0003075!4.96e-07!71;UBERON:0007284!4.96e-07!71;UBERON:0001049!8.36e-07!52;UBERON:0005068!8.36e-07!52;UBERON:0006241!8.36e-07!52;UBERON:0007135!8.36e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.84e-09,92;UBERON:0000955,4.73e-07,47;UBERON:0006238,4.73e-07,47;UBERON:0002616,7.59e-07,46;UBERON:0001049,8.36e-07,52;UBERON:0005068,8.36e-07,52;UBERON:0006241,8.36e-07,52;UBERON:0007135,8.36e-07,52|phase1_expression=8.0074423552397,2.79180326111489,0.454999239389536,2.72217790176147,1.00179145989269,7.55456723603504,6.77476657727024,14.332688902015,21.8222519335083,22.0020654742674,26.8812210114043,23.1339261086476,11.9840510951844,16.4350356547715,1.33243904726265,2.02475267389826,2.09868563438444,8.67520954735154,5.34746291062381,8.48779303596061,6.29320347117916,5.56029326724958,3.13439746966722,4.15980299262857,5.96464130774642,2.29692785646008,3.01533397311352,4.74036711908956,5.51067916423484,3.2763916868791,5.54326276638262,6.35030673459631,4.92051830067656,0,2.59966457776147,3.65716219788683,4.28755648150975,10.4632907684227,7.0320181007142,8.37637990358077,8.82347232046521,11.6117732442936,8.73918635456076,3.39921408534059,4.1564541800001,2.56965453026354,10.1710874765245,8.93903141159831,9.00713349211335,8.94377535741704,4.75953833526233,2.87505128729943,8.55691290894455,8.70434570413613,9.41062637598899,9.77585856936598,9.45560351797897,10.8291139378263,6.06949382578793,3.1739458756322,5.07065122804943,5.42151251310611,3.55717918444456,14.8483453351431,9.88866362566974,18.4724829885986,9.28760342607055,8.06858441175265,3.11068836925433,3.10513658162888,3.57552434297349,9.99778445413313,8.83474163806454,3.67472397644862,3.83381884072945,1.83843757322004,3.30347642998166,8.42736431362239,6.14426133024974,4.2203612073662,3.93396867490361,3.64639359389732,10.6089539620525,7.87867654044352,10.6958773443767,5.89257170947335,4.9830088279686,4.84638559145781,8.17842887998388,6.65029728939713,7.8263411949453,3.44169550792555,6.11974200336975,2.69851595818909,1.94932925234301,1.34408066129201,3.08977724289854,3.06774580640504,3.89679006904303,4.24007489412408,13.661811718338,1.28326477414318,0,0,6.061749148314,7.34743609877786,4.54972000513305,3.88225191044804,5.69663344023778,6.23456984072264,9.36820764537134,10.9607572192371,10.1470818792666,12.2085338847624,5.17390311397101,7.6656620711102,16.8092578059374,6.79616977523585,5.30766331169925,4.36770494858005,2.87093973998512,2.42437626567611,3.72783522436244,12.8823550685081,9.63454851341893,3.83185582812887,6.94927722134338,2.39961092397363,7.49714339731082,14.8292733010774,11.4375150704657,1.88481528169297,15.4703644971126,11.5071955798649,12.8828587626927,10.707923362472,4.58277137326423,4.60305791257344,15.1633655060205,15.1518136238261,5.98554037628437,4.36813998423599,6.30217454318722,5.57607825992146,6.25935792192216,7.68682321709099,7.49613796477831,20.4375662883822,8.62271971731369,5.48407632486676,4.92663147659057,6.57587197282724,5.83899223373756,6.96504333044333,4.52720700097476,7.96137067273973,3.51106593656617,4.37491442095016,3.6941254921427,9.11353399156208,9.38104239924385,10.6236616261999,10.180023630164,10.231740050865,10.7986979021165,10.2314935690179,13.9502168727802,5.60473643362414,7.40519324610662,3.77585167381919,4.45878452502207,2.92399974850665,3.51280184465681,6.97873377553933,12.8276868624118,3.91037527041281,1.98251269790279,4.7601101999438,7.67837701926842,9.75394021813842,11.5980715189884,21.3784536100743,18.902133726814,12.5548913234289,4.74529061544512,7.90554982675252,5.02670417600539,4.57599885694647,4.28920991662064,5.39291645192533,3.02593269824572,3.78368419183298,8.72472344384176,8.11164439529075,7.88954149711563,9.16430975303914,10.861339281387,6.73303870947058,6.89278254654404,9.74226976665374,6.59394656933774,8.14421281883883,2.07516838961004,11.5123122944105,9.82794975566015,6.97072548393047,13.5916281330297,10.1294407096015,7.38414970166117,9.49397253587675,4.05338066937588,2.47105271869273,1.43768206527355,2.23284568601102,3.43241440426017,3.53610429125956,1.25578189465339,2.8946611281802,6.46636165583116,7.95863929436036,8.8001087278694,7.63852885988347,3.98973422090454,7.87279409976534,10.7119638398706,6.82967767502296,4.41378403497335,3.10050565508285,3.02964060449226,3.60499292374624,6.38934432903814,6.219909519005,9.04747703635634,11.9659250440116,4.91764273019036,4.41498794087572,11.559642479121,10.1974167335217,5.57378814280696,5.55436039849621,6.62567260774139,4.29482618726302,3.44677436372478,3.10659437338318,1.78238939265915,2.54768877709949,3.64329631507405,3.50707029493574,3.95287777946523,9.3183181762324,7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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20525 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P17809 | |||
|association_with_transcript=0bp_to_NM_011400,uc008ule.2_5end | |||
|cluster_id=chr4:118781341..118781363,+ | |||
|description=CAGE_peak_2_at_Slc2a1_5end | |||
|id=chr4:118781341..118781363,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.86e-07!63;UBERON:0002346!4.96e-07!71;UBERON:0003075!4.96e-07!71;UBERON:0007284!4.96e-07!71;UBERON:0001049!8.36e-07!52;UBERON:0005068!8.36e-07!52;UBERON:0006241!8.36e-07!52;UBERON:0007135!8.36e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.84e-09,92;UBERON:0000955,4.73e-07,47;UBERON:0006238,4.73e-07,47;UBERON:0002616,7.59e-07,46;UBERON:0001049,8.36e-07,52;UBERON:0005068,8.36e-07,52;UBERON:0006241,8.36e-07,52;UBERON:0007135,8.36e-07,52 | |||
|phase1_expression=8.0074423552397,2.79180326111489,0.454999239389536,2.72217790176147,1.00179145989269,7.55456723603504,6.77476657727024,14.332688902015,21.8222519335083,22.0020654742674,26.8812210114043,23.1339261086476,11.9840510951844,16.4350356547715,1.33243904726265,2.02475267389826,2.09868563438444,8.67520954735154,5.34746291062381,8.48779303596061,6.29320347117916,5.56029326724958,3.13439746966722,4.15980299262857,5.96464130774642,2.29692785646008,3.01533397311352,4.74036711908956,5.51067916423484,3.2763916868791,5.54326276638262,6.35030673459631,4.92051830067656,0,2.59966457776147,3.65716219788683,4.28755648150975,10.4632907684227,7.0320181007142,8.37637990358077,8.82347232046521,11.6117732442936,8.73918635456076,3.39921408534059,4.1564541800001,2.56965453026354,10.1710874765245,8.93903141159831,9.00713349211335,8.94377535741704,4.75953833526233,2.87505128729943,8.55691290894455,8.70434570413613,9.41062637598899,9.77585856936598,9.45560351797897,10.8291139378263,6.06949382578793,3.1739458756322,5.07065122804943,5.42151251310611,3.55717918444456,14.8483453351431,9.88866362566974,18.4724829885986,9.28760342607055,8.06858441175265,3.11068836925433,3.10513658162888,3.57552434297349,9.99778445413313,8.83474163806454,3.67472397644862,3.83381884072945,1.83843757322004,3.30347642998166,8.42736431362239,6.14426133024974,4.2203612073662,3.93396867490361,3.64639359389732,10.6089539620525,7.87867654044352,10.6958773443767,5.89257170947335,4.9830088279686,4.84638559145781,8.17842887998388,6.65029728939713,7.8263411949453,3.44169550792555,6.11974200336975,2.69851595818909,1.94932925234301,1.34408066129201,3.08977724289854,3.06774580640504,3.89679006904303,4.24007489412408,13.661811718338,1.28326477414318,0,0,6.061749148314,7.34743609877786,4.54972000513305,3.88225191044804,5.69663344023778,6.23456984072264,9.36820764537134,10.9607572192371,10.1470818792666,12.2085338847624,5.17390311397101,7.6656620711102,16.8092578059374,6.79616977523585,5.30766331169925,4.36770494858005,2.87093973998512,2.42437626567611,3.72783522436244,12.8823550685081,9.63454851341893,3.83185582812887,6.94927722134338,2.39961092397363,7.49714339731082,14.8292733010774,11.4375150704657,1.88481528169297,15.4703644971126,11.5071955798649,12.8828587626927,10.707923362472,4.58277137326423,4.60305791257344,15.1633655060205,15.1518136238261,5.98554037628437,4.36813998423599,6.30217454318722,5.57607825992146,6.25935792192216,7.68682321709099,7.49613796477831,20.4375662883822,8.62271971731369,5.48407632486676,4.92663147659057,6.57587197282724,5.83899223373756,6.96504333044333,4.52720700097476,7.96137067273973,3.51106593656617,4.37491442095016,3.6941254921427,9.11353399156208,9.38104239924385,10.6236616261999,10.180023630164,10.231740050865,10.7986979021165,10.2314935690179,13.9502168727802,5.60473643362414,7.40519324610662,3.77585167381919,4.45878452502207,2.92399974850665,3.51280184465681,6.97873377553933,12.8276868624118,3.91037527041281,1.98251269790279,4.7601101999438,7.67837701926842,9.75394021813842,11.5980715189884,21.3784536100743,18.902133726814,12.5548913234289,4.74529061544512,7.90554982675252,5.02670417600539,4.57599885694647,4.28920991662064,5.39291645192533,3.02593269824572,3.78368419183298,8.72472344384176,8.11164439529075,7.88954149711563,9.16430975303914,10.861339281387,6.73303870947058,6.89278254654404,9.74226976665374,6.59394656933774,8.14421281883883,2.07516838961004,11.5123122944105,9.82794975566015,6.97072548393047,13.5916281330297,10.1294407096015,7.38414970166117,9.49397253587675,4.05338066937588,2.47105271869273,1.43768206527355,2.23284568601102,3.43241440426017,3.53610429125956,1.25578189465339,2.8946611281802,6.46636165583116,7.95863929436036,8.8001087278694,7.63852885988347,3.98973422090454,7.87279409976534,10.7119638398706,6.82967767502296,4.41378403497335,3.10050565508285,3.02964060449226,3.60499292374624,6.38934432903814,6.219909519005,9.04747703635634,11.9659250440116,4.91764273019036,4.41498794087572,11.559642479121,10.1974167335217,5.57378814280696,5.55436039849621,6.62567260774139,4.29482618726302,3.44677436372478,3.10659437338318,1.78238939265915,2.54768877709949,3.64329631507405,3.50707029493574,3.95287777946523,9.3183181762324,7.38088443082997,10.5058706163681,2.93196526836437,6.76377504187395,9.2921596837974,9.22566417388929,11.4882951646605,7.16699303072413,10.0402643579463,7.07100840271033,5.94385074286909,2.54473610634254,2.49548164869305,4.74055136903724,2.10837217149998,5.15677716240934,18.3837387107046,6.66226047915848,14.6175312674513,15.2179294872431,17.7340233642274,14.8046118609719,15.7967059778036,17.6589670486468,22.0591405579888,20.3358788029267,7.05690873775878,5.44124634706884,2.9063596805263,5.54878909339034,4.05865969610664,3.77524069413641,6.70405924248657,10.0129663085675,4.44264290074417,10.5257302661243,5.55583582109135,2.26042148405629,1.77702496037333,2.28778173206523,4.41943917984024,6.85762116385924,4.69879910935041,3.81868247206045,8.69923982348122,9.96265388921559,10.1525020372493,8.57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| |||
|short_description=p2@Slc2a1 | |||
}} |
Revision as of 15:51, 4 August 2015
Short description: | p2@Slc2a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc2a1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_011400, uc008ule.2_5end |
EntrezGene: | 20525 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 8.84e-09 | 92 |
brain | 4.73e-07 | 47 |
future brain | 4.73e-07 | 47 |
regional part of brain | 7.59e-07 | 46 |
neural tube | 8.36e-07 | 52 |
neural rod | 8.36e-07 | 52 |
future spinal cord | 8.36e-07 | 52 |
neural keel | 8.36e-07 | 52 |