FFCP PHASE1:Mm9::chr4:119330199..119330218,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1198 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:119330199..119330218,- | |||
|description=CAGE_peak_at_chr4:119330199..119330218,- | |description=CAGE_peak_at_chr4:119330199..119330218,- | ||
|id=chr4:119330199..119330218,- | |id=chr4:119330199..119330218,- | ||
|ontology_enrichment_celltype=CL:0000239!2.77e-17!6;CL:0000677!2.77e-17!6;CL:0000212!2.77e-17!6;CL:0000584!2.77e-17!6;CL:0000075!1.01e-14!7;CL:0002563!2.65e-11!9;CL:0002251!2.65e-11!9;CL:0000473!4.15e-10!3;CL:0000627!4.15e-10!3;CL:0000682!4.15e-10!3;CL:0000066!3.11e-08!25 | |ontology_enrichment_celltype=CL:0000239!2.77e-17!6;CL:0000677!2.77e-17!6;CL:0000212!2.77e-17!6;CL:0000584!2.77e-17!6;CL:0000075!1.01e-14!7;CL:0002563!2.65e-11!9;CL:0002251!2.65e-11!9;CL:0000473!4.15e-10!3;CL:0000627!4.15e-10!3;CL:0000682!4.15e-10!3;CL:0000066!3.11e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.16e-17,6;CL:0000677,3.16e-17,6;CL:0000584,3.16e-17,6;CL:0000075,9.59e-15,7;CL:0000682,1.36e-13,3;CL:0002563,1.99e-11,9;CL:0002251,1.99e-11,9;CL:0000066,9.79e-10,25;CL:0002076,9.17e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.82e-26!15;UBERON:0000160!9.65e-25!43;UBERON:0001242!8.03e-21!13;UBERON:0000060!8.03e-21!13;UBERON:0001262!8.03e-21!13;UBERON:0004786!8.03e-21!13;UBERON:0005409!1.41e-18!59;UBERON:0004923!4.89e-18!24;UBERON:0003350!2.65e-11!9;UBERON:0004808!2.65e-11!9;UBERON:0001277!2.65e-11!9;UBERON:0000331!3.69e-09!3;UBERON:0002116!3.69e-09!3;UBERON:0001204!3.69e-09!3;UBERON:0001168!3.69e-09!3;UBERON:0000485!3.99e-09!11;UBERON:0001007!7.05e-08!128;UBERON:0001555!7.05e-08!128;UBERON:0007026!7.05e-08!128;UBERON:0004119!1.11e-07!130;UBERON:0000925!1.11e-07!130;UBERON:0006595!1.11e-07!130;UBERON:0001962!2.39e-07!2;UBERON:0001961!2.39e-07!2;UBERON:0001744!2.39e-07!2 | |ontology_enrichment_uberon=UBERON:0000344!2.82e-26!15;UBERON:0000160!9.65e-25!43;UBERON:0001242!8.03e-21!13;UBERON:0000060!8.03e-21!13;UBERON:0001262!8.03e-21!13;UBERON:0004786!8.03e-21!13;UBERON:0005409!1.41e-18!59;UBERON:0004923!4.89e-18!24;UBERON:0003350!2.65e-11!9;UBERON:0004808!2.65e-11!9;UBERON:0001277!2.65e-11!9;UBERON:0000331!3.69e-09!3;UBERON:0002116!3.69e-09!3;UBERON:0001204!3.69e-09!3;UBERON:0001168!3.69e-09!3;UBERON:0000485!3.99e-09!11;UBERON:0001007!7.05e-08!128;UBERON:0001555!7.05e-08!128;UBERON:0007026!7.05e-08!128;UBERON:0004119!1.11e-07!130;UBERON:0000925!1.11e-07!130;UBERON:0006595!1.11e-07!130;UBERON:0001962!2.39e-07!2;UBERON:0001961!2.39e-07!2;UBERON:0001744!2.39e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.97e-31,15;UBERON:0000160,1.94e-26,31;UBERON:0001242,4.90e-24,13;UBERON:0001262,4.90e-24,13;UBERON:0004786,4.90e-24,13;UBERON:0004923,5.59e-19,24;UBERON:0005409,1.43e-16,47;UBERON:0000331,2.94e-12,3;UBERON:0002116,2.94e-12,3;UBERON:0001204,2.94e-12,3;UBERON:0001168,2.94e-12,3;UBERON:0003350,1.99e-11,9;UBERON:0004808,1.99e-11,9;UBERON:0001277,1.99e-11,9;UBERON:0001962,1.03e-09,2;UBERON:0001961,1.03e-09,2;UBERON:0001744,1.03e-09,2;UBERON:0002108,2.53e-09,4;UBERON:0000485,2.60e-09,11;UBERON:0001007,3.70e-07,116;UBERON:0001555,3.70e-07,116;UBERON:0007026,3.70e-07,116;UBERON:0004119,5.51e-07,118;UBERON:0000925,5.51e-07,118;UBERON:0006595,5.51e-07,118;UBERON:0002465,9.78e-07,3 | |||
|phase1_expression=0,3.48975407639361,6.3699893514535,2.11724947914781,4.50806156951712,1.34303417529512,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91971964335605,5.27641346454491,6.31655160526522,4.73838195774982,4.30942465371778,1.52018735565099,1.26015064879965,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.11560453330835,0,0,0,0,0,0.380451252225118,2.37264530772256,1.15289268306808,0.251335208800269,0.397912944082302,0.974820435595601,0,1.08069024937347,2.38969527905241,0,0,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5776454624481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.290692833264657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.48975407639361,6.3699893514535,2.11724947914781,4.50806156951712,1.34303417529512,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91971964335605,5.27641346454491,6.31655160526522,4.73838195774982,4.30942465371778,1.52018735565099,1.26015064879965,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.11560453330835,0,0,0,0,0,0.380451252225118,2.37264530772256,1.15289268306808,0.251335208800269,0.397912944082302,0.974820435595601,0,1.08069024937347,2.38969527905241,0,0,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5776454624481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.290692833264657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:119330199..119330218,- | |short_description=p@chr4:119330199..119330218,- | ||
}} | }} |
Latest revision as of 16:15, 4 August 2015
Short description: | p@chr4:119330199..119330218, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:119330199..119330218, - |
Coexpression cluster: | MCL_coexpression_mm9:1198 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.16e-17 | 6 |
gut absorptive cell | 3.16e-17 | 6 |
enterocyte | 3.16e-17 | 6 |
columnar/cuboidal epithelial cell | 9.59e-15 | 7 |
M cell of gut | 1.36e-13 | 3 |
intestinal epithelial cell | 1.99e-11 | 9 |
epithelial cell of alimentary canal | 1.99e-11 | 9 |
epithelial cell | 9.79e-10 | 25 |
endo-epithelial cell | 9.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.97e-31 | 15 |
intestine | 1.94e-26 | 31 |
intestinal mucosa | 4.90e-24 | 13 |
wall of intestine | 4.90e-24 | 13 |
gastrointestinal system mucosa | 4.90e-24 | 13 |
organ component layer | 5.59e-19 | 24 |
gastrointestinal system | 1.43e-16 | 47 |
ileal mucosa | 2.94e-12 | 3 |
ileum | 2.94e-12 | 3 |
mucosa of small intestine | 2.94e-12 | 3 |
wall of small intestine | 2.94e-12 | 3 |
epithelium of mucosa | 1.99e-11 | 9 |
gastrointestinal system epithelium | 1.99e-11 | 9 |
intestinal epithelium | 1.99e-11 | 9 |
gut-associated lymphoid tissue | 1.03e-09 | 2 |
mucosa-associated lymphoid tissue | 1.03e-09 | 2 |
lymphoid tissue | 1.03e-09 | 2 |
small intestine | 2.53e-09 | 4 |
simple columnar epithelium | 2.60e-09 | 11 |
digestive system | 3.70e-07 | 116 |
digestive tract | 3.70e-07 | 116 |
primitive gut | 3.70e-07 | 116 |
endoderm-derived structure | 5.51e-07 | 118 |
endoderm | 5.51e-07 | 118 |
presumptive endoderm | 5.51e-07 | 118 |
lymphoid system | 9.78e-07 | 3 |