FFCP PHASE1:Mm9::chr1:125367228..125367232,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=135 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:125367228..125367232,- | |||
|description=CAGE_peak_at_chr1:125367228..125367232,- | |description=CAGE_peak_at_chr1:125367228..125367232,- | ||
|id=chr1:125367228..125367232,- | |id=chr1:125367228..125367232,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.33e-13!63;UBERON:0007811!7.48e-13!86;UBERON:0002021!4.70e-11!10;UBERON:0000411!4.70e-11!10;UBERON:0001950!4.70e-11!10;UBERON:0000153!5.51e-11!94;UBERON:0001049!5.64e-11!52;UBERON:0005068!5.64e-11!52;UBERON:0006241!5.64e-11!52;UBERON:0007135!5.64e-11!52;UBERON:0002346!8.83e-11!71;UBERON:0003075!8.83e-11!71;UBERON:0007284!8.83e-11!71;UBERON:0000955!9.02e-11!50;UBERON:0006238!9.02e-11!50;UBERON:0002020!4.67e-10!34;UBERON:0000073!5.03e-10!75;UBERON:0001016!5.03e-10!75;UBERON:0004121!8.27e-10!102;UBERON:0000924!8.27e-10!102;UBERON:0006601!8.27e-10!102;UBERON:0002616!8.60e-10!49;UBERON:0001017!1.10e-09!73;UBERON:0005743!1.10e-09!73;UBERON:0002619!8.37e-09!17;UBERON:0003056!2.55e-08!49;UBERON:0000956!3.78e-08!21;UBERON:0001869!3.78e-08!21;UBERON:0000203!3.78e-08!21;UBERON:0002791!3.86e-08!29;UBERON:0003528!3.86e-08!29;UBERON:0001893!3.86e-08!29;UBERON:0002780!4.76e-07!39;UBERON:0001890!4.76e-07!39;UBERON:0006240!4.76e-07!39;UBERON:0003080!8.99e-07!40 | |ontology_enrichment_uberon=UBERON:0000033!1.33e-13!63;UBERON:0007811!7.48e-13!86;UBERON:0002021!4.70e-11!10;UBERON:0000411!4.70e-11!10;UBERON:0001950!4.70e-11!10;UBERON:0000153!5.51e-11!94;UBERON:0001049!5.64e-11!52;UBERON:0005068!5.64e-11!52;UBERON:0006241!5.64e-11!52;UBERON:0007135!5.64e-11!52;UBERON:0002346!8.83e-11!71;UBERON:0003075!8.83e-11!71;UBERON:0007284!8.83e-11!71;UBERON:0000955!9.02e-11!50;UBERON:0006238!9.02e-11!50;UBERON:0002020!4.67e-10!34;UBERON:0000073!5.03e-10!75;UBERON:0001016!5.03e-10!75;UBERON:0004121!8.27e-10!102;UBERON:0000924!8.27e-10!102;UBERON:0006601!8.27e-10!102;UBERON:0002616!8.60e-10!49;UBERON:0001017!1.10e-09!73;UBERON:0005743!1.10e-09!73;UBERON:0002619!8.37e-09!17;UBERON:0003056!2.55e-08!49;UBERON:0000956!3.78e-08!21;UBERON:0001869!3.78e-08!21;UBERON:0000203!3.78e-08!21;UBERON:0002791!3.86e-08!29;UBERON:0003528!3.86e-08!29;UBERON:0001893!3.86e-08!29;UBERON:0002780!4.76e-07!39;UBERON:0001890!4.76e-07!39;UBERON:0006240!4.76e-07!39;UBERON:0003080!8.99e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.79e-18,10;UBERON:0000411,3.79e-18,10;UBERON:0001950,3.79e-18,10;UBERON:0001851,3.34e-12,1;UBERON:0005889,3.34e-12,1;UBERON:0002619,7.24e-11,17;UBERON:0000956,7.16e-09,21;UBERON:0001869,7.16e-09,21;UBERON:0000203,7.16e-09,21;UBERON:0000955,1.61e-08,47;UBERON:0006238,1.61e-08,47;UBERON:0000073,2.30e-07,54;UBERON:0001017,2.53e-07,73;UBERON:0001016,4.00e-07,75 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0.585561594023094,1.25668024088073,0,0,0,0,0,0,0.125654352112864,0.521472960576829,1.27857728665165,0,0.486723789203273,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0,0.384341160854549,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.14579102687879,3.26521046453006,0.685082519770642,0,0.675022500231806,1.35096360967266,0.906284817968409,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0.17230640686684,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0,0.818462086339379,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0.585561594023094,1.25668024088073,0,0,0,0,0,0,0.125654352112864,0.521472960576829,1.27857728665165,0,0.486723789203273,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0,0.384341160854549,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.14579102687879,3.26521046453006,0.685082519770642,0,0.675022500231806,1.35096360967266,0.906284817968409,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0.17230640686684,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0,0.818462086339379,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr1:125367228..125367232,- | |short_description=p@chr1:125367228..125367232,- | ||
}} | }} |
Latest revision as of 16:20, 4 August 2015
Short description: | p@chr1:125367228..125367232, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:125367228..125367232, - |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.79e-18 | 10 |
visual cortex | 3.79e-18 | 10 |
neocortex | 3.79e-18 | 10 |
cortex | 3.34e-12 | 1 |
zygote cortex | 3.34e-12 | 1 |
regional part of cerebral cortex | 7.24e-11 | 17 |
cerebral cortex | 7.16e-09 | 21 |
cerebral hemisphere | 7.16e-09 | 21 |
pallium | 7.16e-09 | 21 |
brain | 1.61e-08 | 47 |
future brain | 1.61e-08 | 47 |
regional part of nervous system | 2.30e-07 | 54 |
central nervous system | 2.53e-07 | 73 |
nervous system | 4.00e-07 | 75 |