FFCP PHASE1:Mm9::chr17:34614235..34614265,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:34614235..34614265,- | |||
|description=CAGE_peak_at_chr17:34614235..34614265,- | |||
|id=chr17:34614235..34614265,- | |||
|ontology_enrichment_celltype=CL:0000239!2.83e-12!6;CL:0000677!2.83e-12!6;CL:0000212!2.83e-12!6;CL:0000584!2.83e-12!6;CL:0000075!2.26e-10!7;CL:0002563!7.76e-08!9;CL:0002251!7.76e-08!9;CL:0000473!7.20e-07!3;CL:0000627!7.20e-07!3;CL:0000682!7.20e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.36e-19,6;CL:0000677,3.36e-19,6;CL:0000584,3.36e-19,6;CL:0000075,2.30e-16,7;CL:0002563,1.41e-12,9;CL:0002251,1.41e-12,9;CL:0000682,2.61e-10,3;CL:0000066,5.14e-09,25;CL:0002076,2.87e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.45e-26!43;UBERON:0005409!1.21e-24!59;UBERON:0000344!9.90e-18!15;UBERON:0001242!2.76e-14!13;UBERON:0000060!2.76e-14!13;UBERON:0001262!2.76e-14!13;UBERON:0004786!2.76e-14!13;UBERON:0001007!6.47e-10!128;UBERON:0001555!6.47e-10!128;UBERON:0007026!6.47e-10!128;UBERON:0004923!7.31e-10!24;UBERON:0004119!1.26e-09!130;UBERON:0000925!1.26e-09!130;UBERON:0006595!1.26e-09!130;UBERON:0004921!2.06e-08!126;UBERON:0004185!2.06e-08!126;UBERON:0003350!7.76e-08!9;UBERON:0004808!7.76e-08!9;UBERON:0001277!7.76e-08!9;UBERON:0000331!6.32e-07!3;UBERON:0002116!6.32e-07!3;UBERON:0001204!6.32e-07!3;UBERON:0001168!6.32e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.58e-47,31;UBERON:0005409,2.57e-32,47;UBERON:0000344,4.71e-29,15;UBERON:0001242,2.55e-23,13;UBERON:0001262,2.55e-23,13;UBERON:0004786,2.55e-23,13;UBERON:0004923,3.24e-17,24;UBERON:0001007,8.94e-13,116;UBERON:0001555,8.94e-13,116;UBERON:0007026,8.94e-13,116;UBERON:0002108,9.00e-13,4;UBERON:0003350,1.41e-12,9;UBERON:0004808,1.41e-12,9;UBERON:0001277,1.41e-12,9;UBERON:0004119,1.80e-12,118;UBERON:0000925,1.80e-12,118;UBERON:0006595,1.80e-12,118;UBERON:0004921,1.69e-10,114;UBERON:0000331,2.11e-10,3;UBERON:0002116,2.11e-10,3;UBERON:0001204,2.11e-10,3;UBERON:0001168,2.11e-10,3;UBERON:0000485,3.64e-10,11;UBERON:0001962,1.54e-07,2;UBERON:0001961,1.54e-07,2;UBERON:0001744,1.54e-07,2;UBERON:0001155,7.24e-07,2;UBERON:0000059,7.24e-07,2 | |||
|phase1_expression=0,13.9590163055744,17.7449703361919,48.091809597786,58.6048004037226,4.19698179779725,6.54115393667472,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,12.6394014006791,15.5998311125676,7.46501553349526,17.230479846363,10.5580904016086,38.7647775691003,10.0812051903972,8.42575940490158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26046957459495,4.23120906661671,0,0,0.38660238396628,0.605050573870028,0.889512175379481,1.14135375667535,1.89811624617805,1.81168850196412,3.01602250560323,3.18330355265841,3.11942539390592,4.49409704327111,3.6743468478698,5.37681437786791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0.134864346384821,0.165306911450672,0.26175594198403,3.36998930558661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0.38581844092741,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,13.9590163055744,17.7449703361919,48.091809597786,58.6048004037226,4.19698179779725,6.54115393667472,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,12.6394014006791,15.5998311125676,7.46501553349526,17.230479846363,10.5580904016086,38.7647775691003,10.0812051903972,8.42575940490158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26046957459495,4.23120906661671,0,0,0.38660238396628,0.605050573870028,0.889512175379481,1.14135375667535,1.89811624617805,1.81168850196412,3.01602250560323,3.18330355265841,3.11942539390592,4.49409704327111,3.6743468478698,5.37681437786791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0.134864346384821,0.165306911450672,0.26175594198403,3.36998930558661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0.38581844092741,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr17:34614235..34614265,- | |||
}} | }} |
Latest revision as of 17:26, 4 August 2015
Short description: | p@chr17:34614235..34614265, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:34614235..34614265, - |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.36e-19 | 6 |
gut absorptive cell | 3.36e-19 | 6 |
enterocyte | 3.36e-19 | 6 |
columnar/cuboidal epithelial cell | 2.30e-16 | 7 |
intestinal epithelial cell | 1.41e-12 | 9 |
epithelial cell of alimentary canal | 1.41e-12 | 9 |
M cell of gut | 2.61e-10 | 3 |
epithelial cell | 5.14e-09 | 25 |
endo-epithelial cell | 2.87e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.58e-47 | 31 |
gastrointestinal system | 2.57e-32 | 47 |
mucosa | 4.71e-29 | 15 |
intestinal mucosa | 2.55e-23 | 13 |
wall of intestine | 2.55e-23 | 13 |
gastrointestinal system mucosa | 2.55e-23 | 13 |
organ component layer | 3.24e-17 | 24 |
digestive system | 8.94e-13 | 116 |
digestive tract | 8.94e-13 | 116 |
primitive gut | 8.94e-13 | 116 |
small intestine | 9.00e-13 | 4 |
epithelium of mucosa | 1.41e-12 | 9 |
gastrointestinal system epithelium | 1.41e-12 | 9 |
intestinal epithelium | 1.41e-12 | 9 |
endoderm-derived structure | 1.80e-12 | 118 |
endoderm | 1.80e-12 | 118 |
presumptive endoderm | 1.80e-12 | 118 |
subdivision of digestive tract | 1.69e-10 | 114 |
ileal mucosa | 2.11e-10 | 3 |
ileum | 2.11e-10 | 3 |
mucosa of small intestine | 2.11e-10 | 3 |
wall of small intestine | 2.11e-10 | 3 |
simple columnar epithelium | 3.64e-10 | 11 |
gut-associated lymphoid tissue | 1.54e-07 | 2 |
mucosa-associated lymphoid tissue | 1.54e-07 | 2 |
lymphoid tissue | 1.54e-07 | 2 |
colon | 7.24e-07 | 2 |
large intestine | 7.24e-07 | 2 |