FFCP PHASE1:Mm9::chr6:108482619..108482640,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=489|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:108482619..108482640,-|id=chr6:108482619..108482640,-|ontology_enrichment_celltype=CL:0002563!6.99e-08!9;CL:0002251!6.99e-08!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.22e-11,6;CL:0000677,1.22e-11,6;CL:0000584,1.22e-11,6;CL:0000075,6.16e-10,7;CL:0000682,3.68e-08,3;CL:0002563,1.16e-07,9;CL:0002251,1.16e-07,9;CL:0000066,2.93e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.52e-17!43;UBERON:0005409!5.55e-15!59;UBERON:0000344!3.90e-13!15;UBERON:0001242!2.35e-11!13;UBERON:0000060!2.35e-11!13;UBERON:0001262!2.35e-11!13;UBERON:0004786!2.35e-11!13;UBERON:0003350!6.99e-08!9;UBERON:0004808!6.99e-08!9;UBERON:0001277!6.99e-08!9;UBERON:0004923!5.70e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.58e-50,31;UBERON:0005409,4.87e-34,47;UBERON:0000344,4.35e-21,15;UBERON:0001242,2.50e-16,13;UBERON:0001262,2.50e-16,13;UBERON:0004786,2.50e-16,13;UBERON:0001007,2.44e-14,116;UBERON:0001555,2.44e-14,116;UBERON:0007026,2.44e-14,116;UBERON:0004119,5.32e-14,118;UBERON:0000925,5.32e-14,118;UBERON:0006595,5.32e-14,118;UBERON:0004923,2.31e-12,24;UBERON:0004921,4.53e-12,114;UBERON:0002108,6.51e-12,4;UBERON:0000331,4.76e-09,3;UBERON:0002116,4.76e-09,3;UBERON:0001204,4.76e-09,3;UBERON:0001168,4.76e-09,3;UBERON:0003350,1.16e-07,9;UBERON:0004808,1.16e-07,9;UBERON:0001277,1.16e-07,9;UBERON:0001155,3.86e-07,2;UBERON:0000059,3.86e-07,2;UBERON:0001962,8.62e-07,2;UBERON:0001961,8.62e-07,2;UBERON:0001744,8.62e-07,2|phase1_expression=0,5.23463111459042,2.72999543633722,8.16653370528441,3.50627010962443,1.34303417529512,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27974995218242,4.5881856213434,2.29692785646008,1.29228598847722,1.939241094173,5.51067916423484,3.78045194639896,2.66076612786366,0,0,0,0.577703239502549,0.997407872150954,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,0.68510327831436,0.258937883647172,0,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.289198713839823,0,0.647067399789637,0.220841518460394,0,11.1835056730873,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.324275238183423,0,0.219550115291051,0,0,0,5.94753809370836,5.81791246659797,0,0,0.644337306610467,3.02525286935014,3.55804870151792,3.23383564391351,5.69434873853414,4.94096864172033,5.02670417600539,4.37704238490532,7.99352757188393,6.29173586057955,6.05186539649144,4.77939055810481,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0.603129249281559,0,0.492422699235184,7.57850175237612,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.661227645802687,0.523511883968059,2.46268449254406,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,0.37456602987953,0.0640251524048693,0.229741875822453,0,0.115884325944855,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.887379030796687,0.476872379894642,0.145346416632329,0.470546902076653,0.0846146078916765,0.182927972872773,0.263069711437843,0.814824683075171,0,0.118635018124174,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.701794825336225,0.859484216193193,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p@chr6:108482619..108482640,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=489 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:108482619..108482640,- | |||
|description=CAGE_peak_at_chr6:108482619..108482640,- | |||
|id=chr6:108482619..108482640,- | |||
|ontology_enrichment_celltype=CL:0002563!6.99e-08!9;CL:0002251!6.99e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.22e-11,6;CL:0000677,1.22e-11,6;CL:0000584,1.22e-11,6;CL:0000075,6.16e-10,7;CL:0000682,3.68e-08,3;CL:0002563,1.16e-07,9;CL:0002251,1.16e-07,9;CL:0000066,2.93e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.52e-17!43;UBERON:0005409!5.55e-15!59;UBERON:0000344!3.90e-13!15;UBERON:0001242!2.35e-11!13;UBERON:0000060!2.35e-11!13;UBERON:0001262!2.35e-11!13;UBERON:0004786!2.35e-11!13;UBERON:0003350!6.99e-08!9;UBERON:0004808!6.99e-08!9;UBERON:0001277!6.99e-08!9;UBERON:0004923!5.70e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.58e-50,31;UBERON:0005409,4.87e-34,47;UBERON:0000344,4.35e-21,15;UBERON:0001242,2.50e-16,13;UBERON:0001262,2.50e-16,13;UBERON:0004786,2.50e-16,13;UBERON:0001007,2.44e-14,116;UBERON:0001555,2.44e-14,116;UBERON:0007026,2.44e-14,116;UBERON:0004119,5.32e-14,118;UBERON:0000925,5.32e-14,118;UBERON:0006595,5.32e-14,118;UBERON:0004923,2.31e-12,24;UBERON:0004921,4.53e-12,114;UBERON:0002108,6.51e-12,4;UBERON:0000331,4.76e-09,3;UBERON:0002116,4.76e-09,3;UBERON:0001204,4.76e-09,3;UBERON:0001168,4.76e-09,3;UBERON:0003350,1.16e-07,9;UBERON:0004808,1.16e-07,9;UBERON:0001277,1.16e-07,9;UBERON:0001155,3.86e-07,2;UBERON:0000059,3.86e-07,2;UBERON:0001962,8.62e-07,2;UBERON:0001961,8.62e-07,2;UBERON:0001744,8.62e-07,2 | |||
|phase1_expression=0,5.23463111459042,2.72999543633722,8.16653370528441,3.50627010962443,1.34303417529512,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27974995218242,4.5881856213434,2.29692785646008,1.29228598847722,1.939241094173,5.51067916423484,3.78045194639896,2.66076612786366,0,0,0,0.577703239502549,0.997407872150954,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,0.68510327831436,0.258937883647172,0,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.289198713839823,0,0.647067399789637,0.220841518460394,0,11.1835056730873,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.324275238183423,0,0.219550115291051,0,0,0,5.94753809370836,5.81791246659797,0,0,0.644337306610467,3.02525286935014,3.55804870151792,3.23383564391351,5.69434873853414,4.94096864172033,5.02670417600539,4.37704238490532,7.99352757188393,6.29173586057955,6.05186539649144,4.77939055810481,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0.603129249281559,0,0.492422699235184,7.57850175237612,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.661227645802687,0.523511883968059,2.46268449254406,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,0.37456602987953,0.0640251524048693,0.229741875822453,0,0.115884325944855,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.887379030796687,0.476872379894642,0.145346416632329,0.470546902076653,0.0846146078916765,0.182927972872773,0.263069711437843,0.814824683075171,0,0.118635018124174,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.701794825336225,0.859484216193193,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr6:108482619..108482640,- | |||
}} |
Latest revision as of 21:10, 4 August 2015
Short description: | p@chr6:108482619..108482640, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:108482619..108482640, - |
Coexpression cluster: | MCL_coexpression_mm9:489 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.22e-11 | 6 |
gut absorptive cell | 1.22e-11 | 6 |
enterocyte | 1.22e-11 | 6 |
columnar/cuboidal epithelial cell | 6.16e-10 | 7 |
M cell of gut | 3.68e-08 | 3 |
intestinal epithelial cell | 1.16e-07 | 9 |
epithelial cell of alimentary canal | 1.16e-07 | 9 |
epithelial cell | 2.93e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.58e-50 | 31 |
gastrointestinal system | 4.87e-34 | 47 |
mucosa | 4.35e-21 | 15 |
intestinal mucosa | 2.50e-16 | 13 |
wall of intestine | 2.50e-16 | 13 |
gastrointestinal system mucosa | 2.50e-16 | 13 |
digestive system | 2.44e-14 | 116 |
digestive tract | 2.44e-14 | 116 |
primitive gut | 2.44e-14 | 116 |
endoderm-derived structure | 5.32e-14 | 118 |
endoderm | 5.32e-14 | 118 |
presumptive endoderm | 5.32e-14 | 118 |
organ component layer | 2.31e-12 | 24 |
subdivision of digestive tract | 4.53e-12 | 114 |
small intestine | 6.51e-12 | 4 |
ileal mucosa | 4.76e-09 | 3 |
ileum | 4.76e-09 | 3 |
mucosa of small intestine | 4.76e-09 | 3 |
wall of small intestine | 4.76e-09 | 3 |
epithelium of mucosa | 1.16e-07 | 9 |
gastrointestinal system epithelium | 1.16e-07 | 9 |
intestinal epithelium | 1.16e-07 | 9 |
colon | 3.86e-07 | 2 |
large intestine | 3.86e-07 | 2 |
gut-associated lymphoid tissue | 8.62e-07 | 2 |
mucosa-associated lymphoid tissue | 8.62e-07 | 2 |
lymphoid tissue | 8.62e-07 | 2 |