FFCP PHASE1:Mm9::chr14:99701118..99701132,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1671|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:99701118..99701132,+|id=chr14:99701118..99701132,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,2.69e-08,3;CL:0002202,2.69e-08,3;CL:0000069,2.69e-08,3;CL:0002632,2.69e-08,3;CL:0002368,2.69e-08,3;CL:0000307,2.69e-08,3;CL:0000377,2.69e-08,3;CL:0002076,3.57e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!9.31e-12!59;UBERON:0000160!6.11e-09!43;UBERON:0000344!8.92e-09!15;UBERON:0001242!2.80e-07!13;UBERON:0000060!2.80e-07!13;UBERON:0001262!2.80e-07!13;UBERON:0004786!2.80e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.21e-24,47;UBERON:0000160,1.22e-24,31;UBERON:0000344,4.46e-15,15;UBERON:0001007,9.70e-13,116;UBERON:0001555,9.70e-13,116;UBERON:0007026,9.70e-13,116;UBERON:0004119,2.07e-12,118;UBERON:0000925,2.07e-12,118;UBERON:0006595,2.07e-12,118;UBERON:0001242,4.58e-11,13;UBERON:0001262,4.58e-11,13;UBERON:0004786,4.58e-11,13;UBERON:0004921,1.05e-10,114;UBERON:0004923,1.42e-10,24;UBERON:0002108,2.14e-10,4;UBERON:0003126,2.69e-08,3;UBERON:0001005,2.69e-08,3;UBERON:0007196,2.69e-08,3;UBERON:0001558,2.69e-08,3;UBERON:0000331,3.97e-08,3;UBERON:0002116,3.97e-08,3;UBERON:0001204,3.97e-08,3;UBERON:0001168,3.97e-08,3|phase1_expression=0,1.04692622291808,0.454999239389536,2.41971369045464,2.00358291978539,0.839396359559449,1.86890112476421,0,0.281577444303333,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0,0,0,0.17008658030214,0,0,6.87967418011649,2.2940928106717,0,0,1.29282739611533,5.89072600314759,1.00812051903972,2.43903561720835,0,0,0,0,0.332469290716985,0.816677425049476,0.837063261473815,0,0.523523743973798,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,1.56478268869608,0,0,0.194429899074283,0.55994568650145,1.43752564364972,0,0,0,0,0,0.515672092277442,0,0,0,0,1.77858959222228,0,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0.383381884072945,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0.37863096666592,0.529000920747499,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,2.38140145112336,2.28023878927589,2.02209778005913,0.34255163915718,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.352766121407114,0,2.22475470960936,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0.457500602818626,0.251308704225729,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0.696504333044333,0.61734640922383,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,0.793351699990633,0,0.232236671860439,0.128867461322093,2.21851877085677,0.444756087689741,1.33157938278791,2.84717436926707,0.658795818896044,1.75934646160189,1.1937388322469,0.779856348476481,8.08937467788799,2.37751854862164,2.38969527905241,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0.704070744865506,0.502518772325447,0.714130922658041,0.975668239288994,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.493647061806363,0.304464949114599,0.938686832254841,0,0.220528398054962,0.16488625294148,1.61464426695906,0.904693873922338,0.477489376012546,0.492422699235184,2.33184669303881,0,0,0.206386867963223,0,0,0.136694227721025,0,0,0.139951452323658,0.138199973804424,4.77335309007557,0.474503990371703,1.01659733563424,0.86404272657441,1.46361807210128,1.52853794622324,0.944050424693745,0.826534557253359,0.523511883968059,1.55537967950151,0.621339313086926,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0.665957860122194,1.34570784914214,0.503653849092235,0.965947970160952,0.187682475451182,0.73260649706906,1.50057865355346,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.459483751644906,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0.407412341537585,0.561142271657738,0.118635018124174,0,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.935726433781634,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p@chr14:99701118..99701132,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1671 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:99701118..99701132,+ | |||
|description=CAGE_peak_at_chr14:99701118..99701132,+ | |||
|id=chr14:99701118..99701132,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.69e-08,3;CL:0002202,2.69e-08,3;CL:0000069,2.69e-08,3;CL:0002632,2.69e-08,3;CL:0002368,2.69e-08,3;CL:0000307,2.69e-08,3;CL:0000377,2.69e-08,3;CL:0002076,3.57e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.31e-12!59;UBERON:0000160!6.11e-09!43;UBERON:0000344!8.92e-09!15;UBERON:0001242!2.80e-07!13;UBERON:0000060!2.80e-07!13;UBERON:0001262!2.80e-07!13;UBERON:0004786!2.80e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.21e-24,47;UBERON:0000160,1.22e-24,31;UBERON:0000344,4.46e-15,15;UBERON:0001007,9.70e-13,116;UBERON:0001555,9.70e-13,116;UBERON:0007026,9.70e-13,116;UBERON:0004119,2.07e-12,118;UBERON:0000925,2.07e-12,118;UBERON:0006595,2.07e-12,118;UBERON:0001242,4.58e-11,13;UBERON:0001262,4.58e-11,13;UBERON:0004786,4.58e-11,13;UBERON:0004921,1.05e-10,114;UBERON:0004923,1.42e-10,24;UBERON:0002108,2.14e-10,4;UBERON:0003126,2.69e-08,3;UBERON:0001005,2.69e-08,3;UBERON:0007196,2.69e-08,3;UBERON:0001558,2.69e-08,3;UBERON:0000331,3.97e-08,3;UBERON:0002116,3.97e-08,3;UBERON:0001204,3.97e-08,3;UBERON:0001168,3.97e-08,3 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,2.41971369045464,2.00358291978539,0.839396359559449,1.86890112476421,0,0.281577444303333,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0,0,0,0.17008658030214,0,0,6.87967418011649,2.2940928106717,0,0,1.29282739611533,5.89072600314759,1.00812051903972,2.43903561720835,0,0,0,0,0.332469290716985,0.816677425049476,0.837063261473815,0,0.523523743973798,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,1.56478268869608,0,0,0.194429899074283,0.55994568650145,1.43752564364972,0,0,0,0,0,0.515672092277442,0,0,0,0,1.77858959222228,0,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0.383381884072945,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0.37863096666592,0.529000920747499,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,2.38140145112336,2.28023878927589,2.02209778005913,0.34255163915718,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.352766121407114,0,2.22475470960936,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0.457500602818626,0.251308704225729,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0.696504333044333,0.61734640922383,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,0.793351699990633,0,0.232236671860439,0.128867461322093,2.21851877085677,0.444756087689741,1.33157938278791,2.84717436926707,0.658795818896044,1.75934646160189,1.1937388322469,0.779856348476481,8.08937467788799,2.37751854862164,2.38969527905241,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0.704070744865506,0.502518772325447,0.714130922658041,0.975668239288994,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.493647061806363,0.304464949114599,0.938686832254841,0,0.220528398054962,0.16488625294148,1.61464426695906,0.904693873922338,0.477489376012546,0.492422699235184,2.33184669303881,0,0,0.206386867963223,0,0,0.136694227721025,0,0,0.139951452323658,0.138199973804424,4.77335309007557,0.474503990371703,1.01659733563424,0.86404272657441,1.46361807210128,1.52853794622324,0.944050424693745,0.826534557253359,0.523511883968059,1.55537967950151,0.621339313086926,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0.665957860122194,1.34570784914214,0.503653849092235,0.965947970160952,0.187682475451182,0.73260649706906,1.50057865355346,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.459483751644906,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0.407412341537585,0.561142271657738,0.118635018124174,0,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.935726433781634,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr14:99701118..99701132,+ | |||
}} |
Latest revision as of 22:21, 4 August 2015
Short description: | p@chr14:99701118..99701132, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:99701118..99701132, + |
Coexpression cluster: | MCL_coexpression_mm9:1671 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.69e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.69e-08 | 3 |
branched duct epithelial cell | 2.69e-08 | 3 |
epithelial cell of lower respiratory tract | 2.69e-08 | 3 |
respiratory epithelial cell | 2.69e-08 | 3 |
tracheal epithelial cell | 2.69e-08 | 3 |
tracheoblast | 2.69e-08 | 3 |
endo-epithelial cell | 3.57e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.21e-24 | 47 |
intestine | 1.22e-24 | 31 |
mucosa | 4.46e-15 | 15 |
digestive system | 9.70e-13 | 116 |
digestive tract | 9.70e-13 | 116 |
primitive gut | 9.70e-13 | 116 |
endoderm-derived structure | 2.07e-12 | 118 |
endoderm | 2.07e-12 | 118 |
presumptive endoderm | 2.07e-12 | 118 |
intestinal mucosa | 4.58e-11 | 13 |
wall of intestine | 4.58e-11 | 13 |
gastrointestinal system mucosa | 4.58e-11 | 13 |
subdivision of digestive tract | 1.05e-10 | 114 |
organ component layer | 1.42e-10 | 24 |
small intestine | 2.14e-10 | 4 |
trachea | 2.69e-08 | 3 |
respiratory airway | 2.69e-08 | 3 |
tracheobronchial tree | 2.69e-08 | 3 |
lower respiratory tract | 2.69e-08 | 3 |
ileal mucosa | 3.97e-08 | 3 |
ileum | 3.97e-08 | 3 |
mucosa of small intestine | 3.97e-08 | 3 |
wall of small intestine | 3.97e-08 | 3 |