Personal tools

FFCP PHASE1:Mm9::chr9:24549775..24549776,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=1727
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr9:24549775..24549776,-
|description=CAGE_peak_at_chr9:24549775..24549776,-
|description=CAGE_peak_at_chr9:24549775..24549776,-
|id=chr9:24549775..24549776,-
|id=chr9:24549775..24549776,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002494,1.19e-07,3;CL:0000737,1.19e-07,3;CL:0000746,1.19e-07,3;CL:0000513,1.19e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!3.08e-31!18;UBERON:0000948!3.08e-31!18;UBERON:0005498!3.08e-31!18;UBERON:0004140!3.08e-31!18;UBERON:0009881!3.08e-31!18;UBERON:0004141!3.08e-31!18;UBERON:0003084!3.08e-31!18;UBERON:0007005!3.08e-31!18;UBERON:0004139!3.08e-31!18;UBERON:0004291!3.08e-31!18;UBERON:0003914!2.67e-23!47;UBERON:0004535!3.30e-23!23;UBERON:0001009!3.30e-23!23;UBERON:0004872!9.03e-18!33;UBERON:0003103!1.43e-13!43;UBERON:0001048!1.85e-08!147;UBERON:0000926!3.21e-08!193;UBERON:0004120!3.21e-08!193;UBERON:0006603!3.21e-08!193;UBERON:0005256!6.01e-08!47;UBERON:0000025!1.60e-07!114;UBERON:0004111!3.57e-07!122;UBERON:0000483!6.72e-07!181
|ontology_enrichment_uberon=UBERON:0007100!3.08e-31!18;UBERON:0000948!3.08e-31!18;UBERON:0005498!3.08e-31!18;UBERON:0004140!3.08e-31!18;UBERON:0009881!3.08e-31!18;UBERON:0004141!3.08e-31!18;UBERON:0003084!3.08e-31!18;UBERON:0007005!3.08e-31!18;UBERON:0004139!3.08e-31!18;UBERON:0004291!3.08e-31!18;UBERON:0003914!2.67e-23!47;UBERON:0004535!3.30e-23!23;UBERON:0001009!3.30e-23!23;UBERON:0004872!9.03e-18!33;UBERON:0003103!1.43e-13!43;UBERON:0001048!1.85e-08!147;UBERON:0000926!3.21e-08!193;UBERON:0004120!3.21e-08!193;UBERON:0006603!3.21e-08!193;UBERON:0005256!6.01e-08!47;UBERON:0000025!1.60e-07!114;UBERON:0004111!3.57e-07!122;UBERON:0000483!6.72e-07!181
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.09e-81,18;UBERON:0000948,1.09e-81,18;UBERON:0005498,1.09e-81,18;UBERON:0004140,1.09e-81,18;UBERON:0009881,1.09e-81,18;UBERON:0004141,1.09e-81,18;UBERON:0003084,1.09e-81,18;UBERON:0007005,1.09e-81,18;UBERON:0004139,1.09e-81,18;UBERON:0004291,1.09e-81,18;UBERON:0004535,1.46e-63,23;UBERON:0001009,1.46e-63,23;UBERON:0004872,9.18e-44,33;UBERON:0003103,3.72e-33,43;UBERON:0003914,3.58e-30,47;UBERON:0003081,2.23e-15,87;UBERON:0010314,1.99e-14,92;UBERON:0000025,3.15e-11,114;UBERON:0000926,1.48e-10,120;UBERON:0004120,1.48e-10,120;UBERON:0006603,1.48e-10,120;UBERON:0004111,2.39e-10,122;UBERON:0001048,3.21e-09,134
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57259436035947,0.85960031981627,3.6097046459421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0.693941307064543,0,0,0.301445281105245,0.823120949949934,0.251333182659351,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,2.89976081549703,5.39409937956521,5.22179978236943,4.02466050494857,3.73852040320067,7.40482141859416,1.86027155800326,3.75582761959467,13.5447797145917,9.87359099480883,7.55170334763838,4.29664690593035,3.50879969820798,1.3173006917463,2.81833479396781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0.83422552858047,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0.538192240565737,0.482443521363367,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57259436035947,0.85960031981627,3.6097046459421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0.693941307064543,0,0,0.301445281105245,0.823120949949934,0.251333182659351,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,2.89976081549703,5.39409937956521,5.22179978236943,4.02466050494857,3.73852040320067,7.40482141859416,1.86027155800326,3.75582761959467,13.5447797145917,9.87359099480883,7.55170334763838,4.29664690593035,3.50879969820798,1.3173006917463,2.81833479396781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0.83422552858047,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0.538192240565737,0.482443521363367,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0
|short_description=p@chr9:24549775..24549776,-
|short_description=p@chr9:24549775..24549776,-
}}
}}

Latest revision as of 22:50, 4 August 2015

Short description:p@chr9:24549775..24549776, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:24549775..24549776, -
Coexpression cluster:MCL_coexpression_mm9:1727
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
2.5
5.0
7.5
10.0
12.5
15.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data