FFCP PHASE1:Mm9::chr11:100002992..100003004,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:100002992..100003004,- | |||
|description=CAGE_peak_at_chr11:100002992..100003004,- | |description=CAGE_peak_at_chr11:100002992..100003004,- | ||
|id=chr11:100002992..100003004,- | |id=chr11:100002992..100003004,- | ||
|ontology_enrichment_celltype=CL:0000066!6.01e-11!25;CL:0002076!5.20e-10!15;CL:0002563!2.44e-09!9;CL:0002251!2.44e-09!9;CL:0000223!5.58e-08!20 | |ontology_enrichment_celltype=CL:0000066!6.01e-11!25;CL:0002076!5.20e-10!15;CL:0002563!2.44e-09!9;CL:0002251!2.44e-09!9;CL:0000223!5.58e-08!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.11e-21,25;CL:0000068,2.22e-18,3;CL:0002202,2.22e-18,3;CL:0000069,2.22e-18,3;CL:0002632,2.22e-18,3;CL:0002368,2.22e-18,3;CL:0000307,2.22e-18,3;CL:0000377,2.22e-18,3;CL:0002076,8.09e-18,15;CL:0000682,8.11e-17,3;CL:0000239,9.13e-15,6;CL:0000677,9.13e-15,6;CL:0000584,9.13e-15,6;CL:0000223,3.25e-13,20;CL:0000075,1.08e-12,7;CL:0002563,6.33e-10,9;CL:0002251,6.33e-10,9;CL:0000473,1.60e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.62e-16!59;UBERON:0000344!1.97e-14!15;UBERON:0000160!8.10e-14!43;UBERON:0001242!7.25e-12!13;UBERON:0000060!7.25e-12!13;UBERON:0001262!7.25e-12!13;UBERON:0004786!7.25e-12!13;UBERON:0004923!1.37e-11!24;UBERON:0004119!3.52e-10!130;UBERON:0000925!3.52e-10!130;UBERON:0006595!3.52e-10!130;UBERON:0003350!2.44e-09!9;UBERON:0004808!2.44e-09!9;UBERON:0001277!2.44e-09!9;UBERON:0001007!3.80e-09!128;UBERON:0001555!3.80e-09!128;UBERON:0007026!3.80e-09!128;UBERON:0000485!9.01e-09!11;UBERON:0004921!6.38e-08!126;UBERON:0004185!6.38e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.70e-29,15;UBERON:0001242,4.36e-20,13;UBERON:0001262,4.36e-20,13;UBERON:0004786,4.36e-20,13;UBERON:0003126,2.22e-18,3;UBERON:0001005,2.22e-18,3;UBERON:0007196,2.22e-18,3;UBERON:0001558,2.22e-18,3;UBERON:0004923,1.26e-17,24;UBERON:0000331,2.60e-17,3;UBERON:0002116,2.60e-17,3;UBERON:0001204,2.60e-17,3;UBERON:0001168,2.60e-17,3;UBERON:0002108,3.90e-13,4;UBERON:0001962,2.30e-12,2;UBERON:0001961,2.30e-12,2;UBERON:0001744,2.30e-12,2;UBERON:0003350,6.33e-10,9;UBERON:0004808,6.33e-10,9;UBERON:0001277,6.33e-10,9;UBERON:0002465,1.55e-08,3;UBERON:0000485,3.72e-08,11;UBERON:0000160,4.52e-08,31;UBERON:0003199,6.09e-07,1 | |||
|phase1_expression=0,2.44282785347553,0.454999239389536,1.20985684522732,0,1.6787927191189,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.03985603307473,2.52350209173887,1.14846392823004,1.29228598847722,2.58565479223067,5.32065574477847,2.01624103807945,2.21730510655305,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,9.95858788651585,10.1343946190039,9.0994400102661,0.45673551887624,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0.220528398054962,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.324016022465404,0.627264888043406,1.09181281873089,0.134864346384821,0.165306911450672,0.785267825952089,0.90730481304255,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.269141569828427,0.503653849092235,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,0.454999239389536,1.20985684522732,0,1.6787927191189,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.03985603307473,2.52350209173887,1.14846392823004,1.29228598847722,2.58565479223067,5.32065574477847,2.01624103807945,2.21730510655305,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,9.95858788651585,10.1343946190039,9.0994400102661,0.45673551887624,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0.220528398054962,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.324016022465404,0.627264888043406,1.09181281873089,0.134864346384821,0.165306911450672,0.785267825952089,0.90730481304255,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.269141569828427,0.503653849092235,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:100002992..100003004,- | |short_description=p@chr11:100002992..100003004,- | ||
}} | }} |
Latest revision as of 02:54, 5 August 2015
Short description: | p@chr11:100002992..100003004, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:100002992..100003004, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.11e-21 | 25 |
duct epithelial cell | 2.22e-18 | 3 |
epithelial cell of tracheobronchial tree | 2.22e-18 | 3 |
branched duct epithelial cell | 2.22e-18 | 3 |
epithelial cell of lower respiratory tract | 2.22e-18 | 3 |
respiratory epithelial cell | 2.22e-18 | 3 |
tracheal epithelial cell | 2.22e-18 | 3 |
tracheoblast | 2.22e-18 | 3 |
endo-epithelial cell | 8.09e-18 | 15 |
M cell of gut | 8.11e-17 | 3 |
brush border epithelial cell | 9.13e-15 | 6 |
gut absorptive cell | 9.13e-15 | 6 |
enterocyte | 9.13e-15 | 6 |
endodermal cell | 3.25e-13 | 20 |
columnar/cuboidal epithelial cell | 1.08e-12 | 7 |
intestinal epithelial cell | 6.33e-10 | 9 |
epithelial cell of alimentary canal | 6.33e-10 | 9 |
defensive cell | 1.60e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.70e-29 | 15 |
intestinal mucosa | 4.36e-20 | 13 |
wall of intestine | 4.36e-20 | 13 |
gastrointestinal system mucosa | 4.36e-20 | 13 |
trachea | 2.22e-18 | 3 |
respiratory airway | 2.22e-18 | 3 |
tracheobronchial tree | 2.22e-18 | 3 |
lower respiratory tract | 2.22e-18 | 3 |
organ component layer | 1.26e-17 | 24 |
ileal mucosa | 2.60e-17 | 3 |
ileum | 2.60e-17 | 3 |
mucosa of small intestine | 2.60e-17 | 3 |
wall of small intestine | 2.60e-17 | 3 |
small intestine | 3.90e-13 | 4 |
gut-associated lymphoid tissue | 2.30e-12 | 2 |
mucosa-associated lymphoid tissue | 2.30e-12 | 2 |
lymphoid tissue | 2.30e-12 | 2 |
epithelium of mucosa | 6.33e-10 | 9 |
gastrointestinal system epithelium | 6.33e-10 | 9 |
intestinal epithelium | 6.33e-10 | 9 |
lymphoid system | 1.55e-08 | 3 |
simple columnar epithelium | 3.72e-08 | 11 |
intestine | 4.52e-08 | 31 |
egg chamber | 6.09e-07 | 1 |