FFCP PHASE1:Mm9::chr15:3221390..3221410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:3221390..3221410,+ | |||
|description=CAGE_peak_at_chr15:3221390..3221410,+ | |description=CAGE_peak_at_chr15:3221390..3221410,+ | ||
|id=chr15:3221390..3221410,+ | |id=chr15:3221390..3221410,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.31e-11,1;CL:0000632,2.31e-11,1;CL:0000213,7.19e-11,1;CL:0002078,7.19e-11,1;CL:0000115,7.19e-11,1;CL:0002262,7.19e-11,1;CL:1000398,7.19e-11,1;CL:0000182,1.43e-08,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.82e-12!22;UBERON:0007499!2.82e-12!22;UBERON:0006925!2.82e-12!22;UBERON:0009497!2.82e-12!22;UBERON:0000015!2.82e-12!22;UBERON:0002423!2.82e-12!22;UBERON:0006235!2.82e-12!22;UBERON:0008835!2.82e-12!22;UBERON:0003894!2.82e-12!22;UBERON:0004161!2.82e-12!22;UBERON:0008836!2.82e-12!22;UBERON:0002365!1.05e-11!25;UBERON:0002330!1.05e-11!25;UBERON:0009854!1.57e-11!23;UBERON:0009856!1.57e-11!23;UBERON:0004119!1.61e-09!130;UBERON:0000925!1.61e-09!130;UBERON:0006595!1.61e-09!130;UBERON:0001007!4.36e-09!128;UBERON:0001555!4.36e-09!128;UBERON:0007026!4.36e-09!128;UBERON:0000160!1.50e-08!43;UBERON:0004921!4.89e-08!126;UBERON:0004185!4.89e-08!126;UBERON:0005409!8.34e-07!59 | |ontology_enrichment_uberon=UBERON:0002107!2.82e-12!22;UBERON:0007499!2.82e-12!22;UBERON:0006925!2.82e-12!22;UBERON:0009497!2.82e-12!22;UBERON:0000015!2.82e-12!22;UBERON:0002423!2.82e-12!22;UBERON:0006235!2.82e-12!22;UBERON:0008835!2.82e-12!22;UBERON:0003894!2.82e-12!22;UBERON:0004161!2.82e-12!22;UBERON:0008836!2.82e-12!22;UBERON:0002365!1.05e-11!25;UBERON:0002330!1.05e-11!25;UBERON:0009854!1.57e-11!23;UBERON:0009856!1.57e-11!23;UBERON:0004119!1.61e-09!130;UBERON:0000925!1.61e-09!130;UBERON:0006595!1.61e-09!130;UBERON:0001007!4.36e-09!128;UBERON:0001555!4.36e-09!128;UBERON:0007026!4.36e-09!128;UBERON:0000160!1.50e-08!43;UBERON:0004921!4.89e-08!126;UBERON:0004185!4.89e-08!126;UBERON:0005409!8.34e-07!59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003199,3.65e-11,1;UBERON:0002394,7.19e-11,1;UBERON:0001281,7.19e-11,1;UBERON:0000353,7.19e-11,1;UBERON:0003497,7.19e-11,1;UBERON:0003909,7.19e-11,1;UBERON:0003928,7.19e-11,1;UBERON:0003835,7.19e-11,1;UBERON:0003513,7.19e-11,1;UBERON:0001280,7.19e-11,1;UBERON:0004647,7.19e-11,1;UBERON:0002294,7.19e-11,1;UBERON:0001173,7.19e-11,1;UBERON:0004912,7.19e-11,1;UBERON:0005171,7.19e-11,1;UBERON:0002107,1.83e-07,22;UBERON:0007499,1.83e-07,22;UBERON:0006925,1.83e-07,22;UBERON:0009497,1.83e-07,22;UBERON:0000015,1.83e-07,22;UBERON:0002423,1.83e-07,22;UBERON:0006235,1.83e-07,22;UBERON:0008835,1.83e-07,22;UBERON:0003894,1.83e-07,22;UBERON:0004161,1.83e-07,22;UBERON:0008836,1.83e-07,22;UBERON:0009854,3.74e-07,23;UBERON:0009856,3.74e-07,23 | |||
|phase1_expression=0,0,1.36499771816861,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,1.37645568640302,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,1.72084775396277,0,1.07940638327563,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.494096864172033,0.502670417600539,0.795825888164603,0.38992817423824,0.898819408654221,0.648414149624083,1.1948476395262,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0.549122826376163,0,0.744281895337007,1.5601883655728,0.252578877947112,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0,0,0,0,0,0.164549020602121,0,0.704015124191131,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,2.98114438571124,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,1.36499771816861,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,1.37645568640302,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,1.72084775396277,0,1.07940638327563,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.494096864172033,0.502670417600539,0.795825888164603,0.38992817423824,0.898819408654221,0.648414149624083,1.1948476395262,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0.549122826376163,0,0.744281895337007,1.5601883655728,0.252578877947112,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0,0,0,0,0,0.164549020602121,0,0.704015124191131,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,2.98114438571124,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr15:3221390..3221410,+ | |short_description=p@chr15:3221390..3221410,+ | ||
}} | }} |
Latest revision as of 04:20, 5 August 2015
Short description: | p@chr15:3221390..3221410, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:3221390..3221410, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.31e-11 | 1 |
hepatic stellate cell | 2.31e-11 | 1 |
lining cell | 7.19e-11 | 1 |
meso-epithelial cell | 7.19e-11 | 1 |
endothelial cell | 7.19e-11 | 1 |
endothelial cell of sinusoid | 7.19e-11 | 1 |
endothelial cell of hepatic sinusoid | 7.19e-11 | 1 |
hepatocyte | 1.43e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chamber | 3.65e-11 | 1 |
bile duct | 7.19e-11 | 1 |
hepatic sinusoid | 7.19e-11 | 1 |
parenchyma | 7.19e-11 | 1 |
abdomen blood vessel | 7.19e-11 | 1 |
sinusoid | 7.19e-11 | 1 |
digestive system duct | 7.19e-11 | 1 |
abdominal segment blood vessel | 7.19e-11 | 1 |
trunk blood vessel | 7.19e-11 | 1 |
liver parenchyma | 7.19e-11 | 1 |
liver lobule | 7.19e-11 | 1 |
biliary system | 7.19e-11 | 1 |
biliary tree | 7.19e-11 | 1 |
biliary bud | 7.19e-11 | 1 |
hepatic duct | 7.19e-11 | 1 |
liver | 1.83e-07 | 22 |
epithelial sac | 1.83e-07 | 22 |
digestive gland | 1.83e-07 | 22 |
epithelium of foregut-midgut junction | 1.83e-07 | 22 |
anatomical boundary | 1.83e-07 | 22 |
hepatobiliary system | 1.83e-07 | 22 |
foregut-midgut junction | 1.83e-07 | 22 |
hepatic diverticulum | 1.83e-07 | 22 |
liver primordium | 1.83e-07 | 22 |
septum transversum | 1.83e-07 | 22 |
liver bud | 1.83e-07 | 22 |
digestive tract diverticulum | 3.74e-07 | 23 |
sac | 3.74e-07 | 23 |