FFCP PHASE1:Mm9::chr1:173785160..173785168,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=250 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:173785160..173785168,+ | |||
|description=CAGE_peak_at_chr1:173785160..173785168,+ | |description=CAGE_peak_at_chr1:173785160..173785168,+ | ||
|id=chr1:173785160..173785168,+ | |id=chr1:173785160..173785168,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.94e-15,2;CL:0002194,4.46e-08,4;CL:0000766,4.46e-08,4;CL:0000234,4.46e-08,4;CL:0000576,4.46e-08,4;CL:0000235,4.46e-08,4;CL:0000864,4.46e-08,4;CL:0002009,4.46e-08,4;CL:0000040,4.46e-08,4;CL:0000559,4.46e-08,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.22e-13!45;UBERON:0003061!1.22e-13!45;UBERON:0004177!1.36e-13!29;UBERON:0002193!2.77e-12!48;UBERON:0002405!4.47e-11!70;UBERON:0005057!1.06e-10!51;UBERON:0003408!1.32e-10!24;UBERON:0002370!1.07e-09!23;UBERON:0000974!1.07e-09!23;UBERON:0004807!1.07e-09!23;UBERON:0005058!1.07e-09!23;UBERON:0003351!1.07e-09!23;UBERON:0009113!1.07e-09!23;UBERON:0003295!1.07e-09!23;UBERON:0009722!1.07e-09!23;UBERON:0005562!1.07e-09!23;UBERON:0007690!1.07e-09!23;UBERON:0001004!1.71e-09!42;UBERON:0001041!3.39e-09!92;UBERON:0006562!4.12e-09!24;UBERON:0001557!4.12e-09!24;UBERON:0001042!4.12e-09!24;UBERON:0008814!4.12e-09!24;UBERON:0009145!4.12e-09!24;UBERON:0000065!9.51e-09!41;UBERON:0000077!3.29e-08!97;UBERON:0003104!6.66e-08!131;UBERON:0009142!6.66e-08!131;UBERON:0000072!1.24e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.44e-07,23;UBERON:0000974,3.44e-07,23;UBERON:0004807,3.44e-07,23;UBERON:0005058,3.44e-07,23;UBERON:0003351,3.44e-07,23;UBERON:0009113,3.44e-07,23;UBERON:0003295,3.44e-07,23;UBERON:0009722,3.44e-07,23;UBERON:0005562,3.44e-07,23;UBERON:0007690,3.44e-07,23;UBERON:0006562,6.91e-07,24;UBERON:0003408,6.91e-07,24;UBERON:0001557,6.91e-07,24;UBERON:0001042,6.91e-07,24;UBERON:0008814,6.91e-07,24;UBERON:0009145,6.91e-07,24;UBERON:0002390,7.17e-07,45;UBERON:0003061,7.17e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.281577444303333,0,0.513653904676515,0.558405112967355,0.171200729931206,0.874204024189974,0,0,0,0.315462165358238,0.548457734422955,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,2.35292595212406,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0.220841518460394,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0.486405680325106,0.274561413188081,4.31304619582064,0.372140947668503,0.312037673114561,0,0,0,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.797273843287435,0.655453258862952,0.345369963731791,0,4.52373851817817,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.170870880797853,0,0.740778109478847,0.376736914009382,0.956859594047176,0.686334519619568,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.841368146639782,0.738447635872886,0.706765149637033,1.82896335972,1.31074040677893,1.07203668813728,1.53938946624527,2.57129184799452,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.281577444303333,0,0.513653904676515,0.558405112967355,0.171200729931206,0.874204024189974,0,0,0,0.315462165358238,0.548457734422955,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,2.35292595212406,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0.220841518460394,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0.486405680325106,0.274561413188081,4.31304619582064,0.372140947668503,0.312037673114561,0,0,0,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.797273843287435,0.655453258862952,0.345369963731791,0,4.52373851817817,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.170870880797853,0,0.740778109478847,0.376736914009382,0.956859594047176,0.686334519619568,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.841368146639782,0.738447635872886,0.706765149637033,1.82896335972,1.31074040677893,1.07203668813728,1.53938946624527,2.57129184799452,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr1:173785160..173785168,+ | |short_description=p@chr1:173785160..173785168,+ | ||
}} | }} |
Latest revision as of 06:51, 5 August 2015
Short description: | p@chr1:173785160..173785168, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173785160..173785168, + |
Coexpression cluster: | MCL_coexpression_mm9:250 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.94e-15 | 2 |
monopoietic cell | 4.46e-08 | 4 |
myeloid leukocyte | 4.46e-08 | 4 |
phagocyte | 4.46e-08 | 4 |
monocyte | 4.46e-08 | 4 |
macrophage | 4.46e-08 | 4 |
tissue-resident macrophage | 4.46e-08 | 4 |
macrophage dendritic cell progenitor | 4.46e-08 | 4 |
monoblast | 4.46e-08 | 4 |
promonocyte | 4.46e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.44e-07 | 23 |
neck | 3.44e-07 | 23 |
respiratory system epithelium | 3.44e-07 | 23 |
hemolymphoid system gland | 3.44e-07 | 23 |
pharyngeal epithelium | 3.44e-07 | 23 |
thymic region | 3.44e-07 | 23 |
pharyngeal gland | 3.44e-07 | 23 |
entire pharyngeal arch endoderm | 3.44e-07 | 23 |
thymus primordium | 3.44e-07 | 23 |
early pharyngeal endoderm | 3.44e-07 | 23 |
pharynx | 6.91e-07 | 24 |
gland of gut | 6.91e-07 | 24 |
upper respiratory tract | 6.91e-07 | 24 |
chordate pharynx | 6.91e-07 | 24 |
pharyngeal arch system | 6.91e-07 | 24 |
pharyngeal region of foregut | 6.91e-07 | 24 |
hematopoietic system | 7.17e-07 | 45 |
blood island | 7.17e-07 | 45 |