FFCP PHASE1:Mm9::chr12:80764821..80764824,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:80764821..80764824,+ | |||
|description=CAGE_peak_at_chr12:80764821..80764824,+ | |description=CAGE_peak_at_chr12:80764821..80764824,+ | ||
|id=chr12:80764821..80764824,+ | |id=chr12:80764821..80764824,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.08e-27,9;CL:0002251,5.08e-27,9;CL:0000066,3.24e-19,25;CL:0000682,1.62e-16,3;CL:0002076,5.87e-16,15;CL:0002250,1.63e-15,3;CL:0000239,4.52e-14,6;CL:0000677,4.52e-14,6;CL:0000584,4.52e-14,6;CL:0000075,4.36e-12,7;CL:0000223,8.56e-12,20;CL:0000473,2.36e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.91e-10!15;UBERON:0001242!2.16e-08!13;UBERON:0000060!2.16e-08!13;UBERON:0001262!2.16e-08!13;UBERON:0004786!2.16e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.28e-45,15;UBERON:0001242,9.26e-37,13;UBERON:0001262,9.26e-37,13;UBERON:0004786,9.26e-37,13;UBERON:0004923,9.31e-28,24;UBERON:0003350,5.08e-27,9;UBERON:0004808,5.08e-27,9;UBERON:0001277,5.08e-27,9;UBERON:0000485,5.36e-22,11;UBERON:0000331,1.09e-14,3;UBERON:0002116,1.09e-14,3;UBERON:0001204,1.09e-14,3;UBERON:0001168,1.09e-14,3;UBERON:0000160,1.19e-14,31;UBERON:0002108,3.64e-11,4;UBERON:0001962,2.38e-10,2;UBERON:0001961,2.38e-10,2;UBERON:0001744,2.38e-10,2;UBERON:0005409,3.50e-09,47;UBERON:0002465,3.46e-07,3 | |||
|phase1_expression=0,14.3079917132138,13.6499771816861,0,0,19.3061162698673,18.6890112476421,2.7115897922731,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,1.59992422793407,2.52350209173887,17.2269589234506,26.7072437618626,31.027857506768,1.14014051673824,1.00812051903972,5.54326276638262,0,0,0,8.95440021228951,4.98703936075477,10.6168065256432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.928946687441754,0.38660238396628,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.995706366271836,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0.162964976442026,0,0.469380496577004,0,0,0.195133647857799,0.472905432318573,0.44292937929755,0.159454768657487,0.491589944147214,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0.716234064018819,2.9545361954111,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.432021363287205,0.209088296014469,0.655087691238533,0,0.578574190077352,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0.549454872801795,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.655490552289177,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.70990322463735,0,0.290692833264657,0.470546902076653,0.25384382367503,0,0,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,14.3079917132138,13.6499771816861,0,0,19.3061162698673,18.6890112476421,2.7115897922731,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,1.59992422793407,2.52350209173887,17.2269589234506,26.7072437618626,31.027857506768,1.14014051673824,1.00812051903972,5.54326276638262,0,0,0,8.95440021228951,4.98703936075477,10.6168065256432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.928946687441754,0.38660238396628,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.995706366271836,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0.162964976442026,0,0.469380496577004,0,0,0.195133647857799,0.472905432318573,0.44292937929755,0.159454768657487,0.491589944147214,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0.716234064018819,2.9545361954111,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.432021363287205,0.209088296014469,0.655087691238533,0,0.578574190077352,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0.549454872801795,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.655490552289177,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.70990322463735,0,0.290692833264657,0.470546902076653,0.25384382367503,0,0,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr12:80764821..80764824,+ | |short_description=p@chr12:80764821..80764824,+ | ||
}} | }} |
Latest revision as of 07:48, 5 August 2015
Short description: | p@chr12:80764821..80764824, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:80764821..80764824, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.08e-27 | 9 |
epithelial cell of alimentary canal | 5.08e-27 | 9 |
epithelial cell | 3.24e-19 | 25 |
M cell of gut | 1.62e-16 | 3 |
endo-epithelial cell | 5.87e-16 | 15 |
intestinal crypt stem cell | 1.63e-15 | 3 |
brush border epithelial cell | 4.52e-14 | 6 |
gut absorptive cell | 4.52e-14 | 6 |
enterocyte | 4.52e-14 | 6 |
columnar/cuboidal epithelial cell | 4.36e-12 | 7 |
endodermal cell | 8.56e-12 | 20 |
defensive cell | 2.36e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.28e-45 | 15 |
intestinal mucosa | 9.26e-37 | 13 |
wall of intestine | 9.26e-37 | 13 |
gastrointestinal system mucosa | 9.26e-37 | 13 |
organ component layer | 9.31e-28 | 24 |
epithelium of mucosa | 5.08e-27 | 9 |
gastrointestinal system epithelium | 5.08e-27 | 9 |
intestinal epithelium | 5.08e-27 | 9 |
simple columnar epithelium | 5.36e-22 | 11 |
ileal mucosa | 1.09e-14 | 3 |
ileum | 1.09e-14 | 3 |
mucosa of small intestine | 1.09e-14 | 3 |
wall of small intestine | 1.09e-14 | 3 |
intestine | 1.19e-14 | 31 |
small intestine | 3.64e-11 | 4 |
gut-associated lymphoid tissue | 2.38e-10 | 2 |
mucosa-associated lymphoid tissue | 2.38e-10 | 2 |
lymphoid tissue | 2.38e-10 | 2 |
gastrointestinal system | 3.50e-09 | 47 |
lymphoid system | 3.46e-07 | 3 |