FFCP PHASE1:Mm9::chr4:40753596..40753614,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1945 | |MCL_coexpression_id=1945 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:40753596..40753614,- | |||
|description=CAGE_peak_at_chr4:40753596..40753614,- | |description=CAGE_peak_at_chr4:40753596..40753614,- | ||
|id=chr4:40753596..40753614,- | |id=chr4:40753596..40753614,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.21e-08,3;CL:0000737,1.21e-08,3;CL:0000746,1.21e-08,3;CL:0000513,1.21e-08,3;CL:0000355,5.90e-07,9;CL:0000680,6.23e-07,6;CL:0000187,6.23e-07,6;CL:0000056,6.23e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.90e-07,9;UBERON:0002036,5.90e-07,9;UBERON:0002385,5.90e-07,9;UBERON:0000486,5.90e-07,9;UBERON:0007503,5.90e-07,9;UBERON:0001015,5.90e-07,9;UBERON:0002329,5.90e-07,9;UBERON:0003082,5.90e-07,9;UBERON:0003059,5.90e-07,9;UBERON:0007282,5.90e-07,9;UBERON:0004290,5.90e-07,9;UBERON:0009618,5.90e-07,9 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0,0.774739940649458,0.281577444303333,0.468129052643987,0.171217968225505,0,0.342401459862411,0.262261207256992,0,1.01237633694913,0.699561878128147,0,0.411343300817216,0,0.0850432901510698,0.496454756004426,0.261199789138935,1.43993180514066,0.91763712426868,1.14846392823004,0.86152399231815,0.215471232685889,1.52018735565099,0.252030129759931,1.77384408524244,0,0,0,0,0.332469290716985,0.612508068787107,2.51118978442145,0.7813353445238,0,0.588231488031014,0,1.94204141212461,0.629484089877886,1.11514624341466,0.550640256485045,0.782391344348039,0,0.219686182734472,0.194429899074283,0,0,0.335565212115473,0,1.68046899571232,1.54355661621568,2.86533439938757,2.06268836910977,0.202316460859598,0,0.633831403506179,0.677689064138264,1.77858959222228,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,1.94932925234301,0,0.140444420131752,1.02258193546835,1.55871602761721,0.35333957451034,0.422530259330042,0,0,0,0.432982082022428,0.760079596425296,0,0.5709193985953,0,0.445326417194474,0.867426633830679,0.608930956624282,0.922461989024234,0.904335843315735,0.23517741427141,0.251333182659351,1.97755974187499,0.289198713839823,0.884610551949874,0.485300549842228,0,0,0,0,0.209446706813455,0.510914110417183,0.479260498023681,0,0.889491589511453,0,0,0,0,0,0,0,0.81471491080253,0.746441823660558,0.505445516867349,0.420883711772948,0.910843100738926,0.229902104433473,0,0.452114453507145,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0.61734640922383,0.398068533636986,0.702213187313235,0,0.284163499395593,0.621377317606506,0.703578179943289,0.540186184383045,0.23674473558521,0.196764231747404,0.925602677324269,0.930135779001631,1.3413670069981,0.583826711835847,0.493679549740441,1.80584210487005,0.56748166682099,1.31579988682799,0.878200461164203,0.134206418760372,0,0.205809224758569,0.991256348951394,0.528901133327089,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0,0.380451252225118,0.949058123089023,0,0.502670417600539,0,0,1.79763881730844,1.29682829924817,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.210407459670956,0.505892296994058,0.147610147979602,0.156998727841375,0.123397163921801,0.592905254174298,0.667380422864376,0.393117990226406,0.449724224769707,0.405720242777006,0.72353147925725,0,0,0.486405680325106,0.549122826376163,12.9391385874619,1.11642284300551,0,0,0,0,0,0,0.488894929326078,0.509235257325564,0.469380496577004,0,0.952174563544055,0.585400943573396,0.788175720530955,0.664394068946325,0.318909537314974,0.983179888294428,0.863424909329478,0.867894351489069,1.50791283939272,0,8.35999264132362,8.00216564283724,0,0,0.819674726883377,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0.790575555893047,0,0.283880170416537,0.712262414669021,0.325773918707152,0.824850614862677,0,0.242780636154981,0.302323556964751,1.13163047853539,0.295301892880773,0.922305443831782,0.258428293168221,1.45413491791002,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.720244376125241,0.646793418913773,0.214337035031592,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0.23467170806371,1.27099242518292,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.596861720015682,0.492422699235184,0.291480836629851,0,0.170870880797853,0.619160603889667,0,0.565105371014073,0.546776910884101,0.457556346413045,0.169978429993855,0.139951452323658,0.276399947608848,0.954670618015114,0,0.203319467126849,0.324016022465404,0.836353184057875,0.655087691238533,0,0.0826534557253359,1.83229159388821,1.03691978633434,0,0,0.299033092087958,0,0.583353565032143,0.258319646955462,1.35164900392623,0.821500670520278,0.781226309063701,0.209718688851422,1.20792060413003,0,0.316011120628178,0.405450430580328,1.02710957164827,0.51968329191118,0.179026695667481,0.39736270956253,0.240390899039938,0.443068581523732,0.302899349844443,0.15241361331,0.403304740547362,0.194915761479505,0.577271049841977,0.116876902181569,0,0.665957860122194,0.717710852875806,1.34307693091263,0.19318959403219,0.750729901804728,0.73260649706906,0.214368379079066,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0,0.628839487883947,0.183843508450014,0.666740183404846,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.448176066834085,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.588795680537589,0,0.532427418478012,0.238436189947321,0.581385666529314,0.188218760830661,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0,0.593175090620871,0.197008964751127,0,0.619747364743864,0.385813221962283,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0.441182838239031,0 | |phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0,0.774739940649458,0.281577444303333,0.468129052643987,0.171217968225505,0,0.342401459862411,0.262261207256992,0,1.01237633694913,0.699561878128147,0,0.411343300817216,0,0.0850432901510698,0.496454756004426,0.261199789138935,1.43993180514066,0.91763712426868,1.14846392823004,0.86152399231815,0.215471232685889,1.52018735565099,0.252030129759931,1.77384408524244,0,0,0,0,0.332469290716985,0.612508068787107,2.51118978442145,0.7813353445238,0,0.588231488031014,0,1.94204141212461,0.629484089877886,1.11514624341466,0.550640256485045,0.782391344348039,0,0.219686182734472,0.194429899074283,0,0,0.335565212115473,0,1.68046899571232,1.54355661621568,2.86533439938757,2.06268836910977,0.202316460859598,0,0.633831403506179,0.677689064138264,1.77858959222228,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,1.94932925234301,0,0.140444420131752,1.02258193546835,1.55871602761721,0.35333957451034,0.422530259330042,0,0,0,0.432982082022428,0.760079596425296,0,0.5709193985953,0,0.445326417194474,0.867426633830679,0.608930956624282,0.922461989024234,0.904335843315735,0.23517741427141,0.251333182659351,1.97755974187499,0.289198713839823,0.884610551949874,0.485300549842228,0,0,0,0,0.209446706813455,0.510914110417183,0.479260498023681,0,0.889491589511453,0,0,0,0,0,0,0,0.81471491080253,0.746441823660558,0.505445516867349,0.420883711772948,0.910843100738926,0.229902104433473,0,0.452114453507145,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0.61734640922383,0.398068533636986,0.702213187313235,0,0.284163499395593,0.621377317606506,0.703578179943289,0.540186184383045,0.23674473558521,0.196764231747404,0.925602677324269,0.930135779001631,1.3413670069981,0.583826711835847,0.493679549740441,1.80584210487005,0.56748166682099,1.31579988682799,0.878200461164203,0.134206418760372,0,0.205809224758569,0.991256348951394,0.528901133327089,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0,0.380451252225118,0.949058123089023,0,0.502670417600539,0,0,1.79763881730844,1.29682829924817,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.210407459670956,0.505892296994058,0.147610147979602,0.156998727841375,0.123397163921801,0.592905254174298,0.667380422864376,0.393117990226406,0.449724224769707,0.405720242777006,0.72353147925725,0,0,0.486405680325106,0.549122826376163,12.9391385874619,1.11642284300551,0,0,0,0,0,0,0.488894929326078,0.509235257325564,0.469380496577004,0,0.952174563544055,0.585400943573396,0.788175720530955,0.664394068946325,0.318909537314974,0.983179888294428,0.863424909329478,0.867894351489069,1.50791283939272,0,8.35999264132362,8.00216564283724,0,0,0.819674726883377,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0.790575555893047,0,0.283880170416537,0.712262414669021,0.325773918707152,0.824850614862677,0,0.242780636154981,0.302323556964751,1.13163047853539,0.295301892880773,0.922305443831782,0.258428293168221,1.45413491791002,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.720244376125241,0.646793418913773,0.214337035031592,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0.23467170806371,1.27099242518292,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.596861720015682,0.492422699235184,0.291480836629851,0,0.170870880797853,0.619160603889667,0,0.565105371014073,0.546776910884101,0.457556346413045,0.169978429993855,0.139951452323658,0.276399947608848,0.954670618015114,0,0.203319467126849,0.324016022465404,0.836353184057875,0.655087691238533,0,0.0826534557253359,1.83229159388821,1.03691978633434,0,0,0.299033092087958,0,0.583353565032143,0.258319646955462,1.35164900392623,0.821500670520278,0.781226309063701,0.209718688851422,1.20792060413003,0,0.316011120628178,0.405450430580328,1.02710957164827,0.51968329191118,0.179026695667481,0.39736270956253,0.240390899039938,0.443068581523732,0.302899349844443,0.15241361331,0.403304740547362,0.194915761479505,0.577271049841977,0.116876902181569,0,0.665957860122194,0.717710852875806,1.34307693091263,0.19318959403219,0.750729901804728,0.73260649706906,0.214368379079066,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0,0.628839487883947,0.183843508450014,0.666740183404846,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.448176066834085,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.588795680537589,0,0.532427418478012,0.238436189947321,0.581385666529314,0.188218760830661,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0,0.593175090620871,0.197008964751127,0,0.619747364743864,0.385813221962283,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0.441182838239031,0 | ||
|short_description=p@chr4:40753596..40753614,- | |short_description=p@chr4:40753596..40753614,- | ||
}} | }} |
Latest revision as of 10:35, 5 August 2015
Short description: | p@chr4:40753596..40753614, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:40753596..40753614, - |
Coexpression cluster: | MCL_coexpression_mm9:1945 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.21e-08 | 3 |
striated muscle cell | 1.21e-08 | 3 |
cardiac muscle cell | 1.21e-08 | 3 |
cardiac muscle myoblast | 1.21e-08 | 3 |
multi-potent skeletal muscle stem cell | 5.90e-07 | 9 |
muscle precursor cell | 6.23e-07 | 6 |
muscle cell | 6.23e-07 | 6 |
myoblast | 6.23e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.90e-07 | 9 |
striated muscle tissue | 5.90e-07 | 9 |
muscle tissue | 5.90e-07 | 9 |
multilaminar epithelium | 5.90e-07 | 9 |
epithelial vesicle | 5.90e-07 | 9 |
musculature | 5.90e-07 | 9 |
somite | 5.90e-07 | 9 |
myotome | 5.90e-07 | 9 |
presomitic mesoderm | 5.90e-07 | 9 |
presumptive segmental plate | 5.90e-07 | 9 |
dermomyotome | 5.90e-07 | 9 |
trunk paraxial mesoderm | 5.90e-07 | 9 |