FFCP PHASE1:Mm9::chr2:73112856..73112865,+: Difference between revisions
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|id=chr2:73112856..73112865,+
|short_description=p@chr2:73112856..73112865,+
|description=CAGE_peak_at_chr2:73112856..73112865,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=184 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:73112856..73112865,+ | |||
|description=CAGE_peak_at_chr2:73112856..73112865,+ | |||
|id=chr2:73112856..73112865,+ | |||
|ontology_enrichment_celltype=CL:0002609!1.60e-14!6;CL:0000117!7.04e-11!23;CL:0000337!7.04e-11!23;CL:0002608!9.08e-09!3;CL:0002613!1.08e-08!3;CL:0000540!2.40e-08!33;CL:0000047!2.40e-08!33;CL:0000031!2.40e-08!33;CL:0000404!2.40e-08!33;CL:0002319!3.22e-08!43;CL:0000221!5.81e-08!44;CL:0000133!5.81e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,4.56e-11,3;CL:0002613,7.15e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.60e-21!50;UBERON:0006238!1.60e-21!50;UBERON:0002780!1.89e-21!39;UBERON:0001890!1.89e-21!39;UBERON:0006240!1.89e-21!39;UBERON:0003080!8.59e-21!40;UBERON:0002616!8.05e-20!49;UBERON:0002791!4.79e-19!29;UBERON:0003528!4.79e-19!29;UBERON:0001893!4.79e-19!29;UBERON:0001049!2.37e-18!52;UBERON:0005068!2.37e-18!52;UBERON:0006241!2.37e-18!52;UBERON:0007135!2.37e-18!52;UBERON:0002020!1.03e-17!34;UBERON:0001017!1.89e-17!73;UBERON:0005743!1.89e-17!73;UBERON:0000073!8.00e-17!75;UBERON:0001016!8.00e-17!75;UBERON:0003056!4.40e-16!49;UBERON:0000033!6.03e-16!63;UBERON:0000369!1.80e-13!5;UBERON:0002435!1.80e-13!5;UBERON:0000204!1.80e-13!5;UBERON:0010082!1.80e-13!5;UBERON:0000956!3.22e-12!21;UBERON:0001869!3.22e-12!21;UBERON:0000203!3.22e-12!21;UBERON:0002346!4.85e-12!71;UBERON:0003075!4.85e-12!71;UBERON:0007284!4.85e-12!71;UBERON:0000153!5.00e-11!94;UBERON:0004121!9.00e-11!102;UBERON:0000924!9.00e-11!102;UBERON:0006601!9.00e-11!102;UBERON:0007811!3.13e-10!86;UBERON:0002619!1.81e-08!17;UBERON:0002420!3.01e-08!8;UBERON:0007245!3.01e-08!8;UBERON:0010009!3.01e-08!8;UBERON:0010011!3.01e-08!8;UBERON:0000454!3.01e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.10e-24,5;UBERON:0002435,5.10e-24,5;UBERON:0000204,5.10e-24,5;UBERON:0010082,5.10e-24,5;UBERON:0002420,1.72e-15,8;UBERON:0007245,1.72e-15,8;UBERON:0010009,1.72e-15,8;UBERON:0010011,1.72e-15,8;UBERON:0000454,1.72e-15,8;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0.367472397644862,1.72521847832825,0.919218786610021,0,0,0.153606533256243,0.395658863190582,0.640413505216868,1.04182674111352,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,1.63350657746724,0,0,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0.499621155875892,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0.367472397644862,1.72521847832825,0.919218786610021,0,0,0.153606533256243,0.395658863190582,0.640413505216868,1.04182674111352,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,1.63350657746724,0,0,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0.499621155875892,0,0,0,0,0 | ||
|short_description=p@chr2:73112856..73112865,+ | |||
}} | }} |
Latest revision as of 10:47, 5 August 2015
Short description: | p@chr2:73112856..73112865, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:73112856..73112865, + |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 4.56e-11 | 3 |
striatum neuron | 7.15e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 5.10e-24 | 5 |
striatum | 5.10e-24 | 5 |
ventral part of telencephalon | 5.10e-24 | 5 |
future corpus striatum | 5.10e-24 | 5 |
basal ganglion | 1.72e-15 | 8 |
nuclear complex of neuraxis | 1.72e-15 | 8 |
aggregate regional part of brain | 1.72e-15 | 8 |
collection of basal ganglia | 1.72e-15 | 8 |
cerebral subcortex | 1.72e-15 | 8 |
brain grey matter | 4.90e-10 | 29 |
regional part of telencephalon | 4.90e-10 | 29 |
telencephalon | 4.90e-10 | 29 |
gray matter | 1.04e-08 | 34 |
regional part of forebrain | 1.01e-07 | 39 |
forebrain | 1.01e-07 | 39 |
future forebrain | 1.01e-07 | 39 |
anterior neural tube | 1.49e-07 | 40 |