FFCP PHASE1:Mm9::chr15:75046595..75046610,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=166 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:75046595..75046610,- | |||
|description=CAGE_peak_at_chr15:75046595..75046610,- | |description=CAGE_peak_at_chr15:75046595..75046610,- | ||
|id=chr15:75046595..75046610,- | |id=chr15:75046595..75046610,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.61e-10,3;CL:0000066,5.60e-09,25;CL:0000239,2.38e-08,6;CL:0000677,2.38e-08,6;CL:0000584,2.38e-08,6;CL:0000075,3.65e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.03e-14!43;UBERON:0009854!1.06e-11!23;UBERON:0009856!1.06e-11!23;UBERON:0005409!1.45e-11!59;UBERON:0002107!9.50e-11!22;UBERON:0007499!9.50e-11!22;UBERON:0006925!9.50e-11!22;UBERON:0009497!9.50e-11!22;UBERON:0000015!9.50e-11!22;UBERON:0002423!9.50e-11!22;UBERON:0006235!9.50e-11!22;UBERON:0008835!9.50e-11!22;UBERON:0003894!9.50e-11!22;UBERON:0004161!9.50e-11!22;UBERON:0008836!9.50e-11!22;UBERON:0005172!1.03e-09!49;UBERON:0005173!1.03e-09!49;UBERON:0002417!1.03e-09!49;UBERON:0000916!1.03e-09!49;UBERON:0001242!5.42e-09!13;UBERON:0000060!5.42e-09!13;UBERON:0001262!5.42e-09!13;UBERON:0004786!5.42e-09!13;UBERON:0001007!6.56e-09!128;UBERON:0001555!6.56e-09!128;UBERON:0007026!6.56e-09!128;UBERON:0002365!7.32e-09!25;UBERON:0002330!7.32e-09!25;UBERON:0004921!9.52e-09!126;UBERON:0004185!9.52e-09!126;UBERON:0000344!1.44e-08!15;UBERON:0004119!1.46e-08!130;UBERON:0000925!1.46e-08!130;UBERON:0006595!1.46e-08!130 | |ontology_enrichment_uberon=UBERON:0000160!1.03e-14!43;UBERON:0009854!1.06e-11!23;UBERON:0009856!1.06e-11!23;UBERON:0005409!1.45e-11!59;UBERON:0002107!9.50e-11!22;UBERON:0007499!9.50e-11!22;UBERON:0006925!9.50e-11!22;UBERON:0009497!9.50e-11!22;UBERON:0000015!9.50e-11!22;UBERON:0002423!9.50e-11!22;UBERON:0006235!9.50e-11!22;UBERON:0008835!9.50e-11!22;UBERON:0003894!9.50e-11!22;UBERON:0004161!9.50e-11!22;UBERON:0008836!9.50e-11!22;UBERON:0005172!1.03e-09!49;UBERON:0005173!1.03e-09!49;UBERON:0002417!1.03e-09!49;UBERON:0000916!1.03e-09!49;UBERON:0001242!5.42e-09!13;UBERON:0000060!5.42e-09!13;UBERON:0001262!5.42e-09!13;UBERON:0004786!5.42e-09!13;UBERON:0001007!6.56e-09!128;UBERON:0001555!6.56e-09!128;UBERON:0007026!6.56e-09!128;UBERON:0002365!7.32e-09!25;UBERON:0002330!7.32e-09!25;UBERON:0004921!9.52e-09!126;UBERON:0004185!9.52e-09!126;UBERON:0000344!1.44e-08!15;UBERON:0004119!1.46e-08!130;UBERON:0000925!1.46e-08!130;UBERON:0006595!1.46e-08!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.49e-28,31;UBERON:0005409,1.96e-17,47;UBERON:0004921,8.58e-14,114;UBERON:0001007,1.81e-13,116;UBERON:0001555,1.81e-13,116;UBERON:0007026,1.81e-13,116;UBERON:0004119,3.71e-13,118;UBERON:0000925,3.71e-13,118;UBERON:0006595,3.71e-13,118;UBERON:0001242,9.36e-11,13;UBERON:0001262,9.36e-11,13;UBERON:0004786,9.36e-11,13;UBERON:0009854,6.29e-10,23;UBERON:0009856,6.29e-10,23;UBERON:0000344,3.35e-09,15;UBERON:0002107,2.64e-08,22;UBERON:0007499,2.64e-08,22;UBERON:0006925,2.64e-08,22;UBERON:0009497,2.64e-08,22;UBERON:0000015,2.64e-08,22;UBERON:0002423,2.64e-08,22;UBERON:0006235,2.64e-08,22;UBERON:0008835,2.64e-08,22;UBERON:0003894,2.64e-08,22;UBERON:0004161,2.64e-08,22;UBERON:0008836,2.64e-08,22;UBERON:0002108,2.51e-07,4;UBERON:0002365,3.70e-07,25;UBERON:0002330,3.70e-07,25;UBERON:0001155,5.68e-07,2;UBERON:0000059,5.68e-07,2 | |||
|phase1_expression=0,2.09385244583617,1.81999695755814,1.20985684522732,3.00537437967808,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,5.16808767703518,3.87685796543167,1.72376986148711,1.90023419456374,1.00812051903972,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0.539703191637817,9.74664626171504,3.58421509677868,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.17340679996253,0,0.232236671860439,1.03093969057675,1.4117846723634,0.22237804384487,0.760902504450237,1.42358718463353,0.823494773620054,1.50801125280162,0,0.38992817423824,2.69645822596266,2.16138049874694,2.19055400579804,0,0.228497025219458,0,0.610953983535943,0.387904974335251,0.210407459670956,0.316182685621286,0.590440591918409,0.627994911365499,0.493588655687202,1.48226313543574,0.166845105716094,0,0.674586337154561,0,0,0,0.575392274901621,0.486405680325106,0.274561413188081,0,1.48856379067401,2.18426371180192,2.77836765741823,6.63770430031075,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.448176066834085,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,2.09385244583617,1.81999695755814,1.20985684522732,3.00537437967808,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,5.16808767703518,3.87685796543167,1.72376986148711,1.90023419456374,1.00812051903972,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0.539703191637817,9.74664626171504,3.58421509677868,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.17340679996253,0,0.232236671860439,1.03093969057675,1.4117846723634,0.22237804384487,0.760902504450237,1.42358718463353,0.823494773620054,1.50801125280162,0,0.38992817423824,2.69645822596266,2.16138049874694,2.19055400579804,0,0.228497025219458,0,0.610953983535943,0.387904974335251,0.210407459670956,0.316182685621286,0.590440591918409,0.627994911365499,0.493588655687202,1.48226313543574,0.166845105716094,0,0.674586337154561,0,0,0,0.575392274901621,0.486405680325106,0.274561413188081,0,1.48856379067401,2.18426371180192,2.77836765741823,6.63770430031075,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.448176066834085,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr15:75046595..75046610,- | |short_description=p@chr15:75046595..75046610,- | ||
}} | }} |
Latest revision as of 11:37, 5 August 2015
Short description: | p@chr15:75046595..75046610, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:75046595..75046610, - |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.61e-10 | 3 |
epithelial cell | 5.60e-09 | 25 |
brush border epithelial cell | 2.38e-08 | 6 |
gut absorptive cell | 2.38e-08 | 6 |
enterocyte | 2.38e-08 | 6 |
columnar/cuboidal epithelial cell | 3.65e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.49e-28 | 31 |
gastrointestinal system | 1.96e-17 | 47 |
subdivision of digestive tract | 8.58e-14 | 114 |
digestive system | 1.81e-13 | 116 |
digestive tract | 1.81e-13 | 116 |
primitive gut | 1.81e-13 | 116 |
endoderm-derived structure | 3.71e-13 | 118 |
endoderm | 3.71e-13 | 118 |
presumptive endoderm | 3.71e-13 | 118 |
intestinal mucosa | 9.36e-11 | 13 |
wall of intestine | 9.36e-11 | 13 |
gastrointestinal system mucosa | 9.36e-11 | 13 |
digestive tract diverticulum | 6.29e-10 | 23 |
sac | 6.29e-10 | 23 |
mucosa | 3.35e-09 | 15 |
liver | 2.64e-08 | 22 |
epithelial sac | 2.64e-08 | 22 |
digestive gland | 2.64e-08 | 22 |
epithelium of foregut-midgut junction | 2.64e-08 | 22 |
anatomical boundary | 2.64e-08 | 22 |
hepatobiliary system | 2.64e-08 | 22 |
foregut-midgut junction | 2.64e-08 | 22 |
hepatic diverticulum | 2.64e-08 | 22 |
liver primordium | 2.64e-08 | 22 |
septum transversum | 2.64e-08 | 22 |
liver bud | 2.64e-08 | 22 |
small intestine | 2.51e-07 | 4 |
exocrine gland | 3.70e-07 | 25 |
exocrine system | 3.70e-07 | 25 |
colon | 5.68e-07 | 2 |
large intestine | 5.68e-07 | 2 |