FFCP PHASE1:Mm9::chr13:103496926..103496929,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=86|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:103496926..103496929,+|id=chr13:103496926..103496929,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,1.42e-08,25;CL:0000553,2.86e-08,6;CL:0000556,2.86e-08,6;CL:0000839,3.95e-08,13;CL:0002476,1.13e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!3.63e-09!193;UBERON:0004120!3.63e-09!193;UBERON:0006603!3.63e-09!193;UBERON:0002405!3.92e-07!70;UBERON:0001474!4.84e-07!22;UBERON:0004765!4.84e-07!22;UBERON:0001434!4.84e-07!22;UBERON:0002193!5.89e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.35e-13,6;UBERON:0004457,8.35e-13,6;UBERON:0000042,8.35e-13,6;UBERON:0004854,8.35e-13,6;UBERON:0009034,8.35e-13,6;UBERON:0002095,8.35e-13,6;UBERON:0004782,8.35e-13,6;UBERON:0003281,8.35e-13,6;UBERON:0009664,8.35e-13,6;UBERON:0002296,8.35e-13,6;UBERON:0005602,8.35e-13,6;UBERON:0001179,8.35e-13,6;UBERON:0006293,8.35e-13,6;UBERON:0002193,3.08e-11,48;UBERON:0002405,3.08e-11,48;UBERON:0002371,3.19e-11,16;UBERON:0002390,1.82e-10,45;UBERON:0003061,1.82e-10,45;UBERON:0001474,7.31e-10,22;UBERON:0004765,7.31e-10,22;UBERON:0001434,7.31e-10,22;UBERON:0003887,1.52e-07,10|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.999329285446988,0.809901069559304,2.09868563438444,8.99067171270977,7.81552271552711,1.69755860719212,0.0850432901510698,5.56029326724958,2.61199789138935,0.95995453676044,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,7.88578248471361,0,0,0,0.85960031981627,0,0,0,0,0,0,3.5995988691256,0.988866362566974,2.8419204597844,0,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0,0,0,0.383062014255563,0,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,3.88406825470758,0.593768556259299,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0.376999773989026,0,0.144599356919912,0.884610551949874,0.808834249737046,2.87093973998512,0.484875253135222,0,0,0.209446706813455,0,0.239630249011841,0.599902730993408,0.381210681219194,0.449371918214468,0,0,0,0.255715457330331,0.41557608911912,0.324482526135515,0.509196819251581,0.746441823660558,0.252722758433675,0.420883711772948,0.130120442962704,0,0.180062129805349,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0,0,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.658650345873152,0.134206418760372,0.420579897128254,0,0,0.264450566663544,0.213288250535234,0.464473343720877,0,0.403367049246685,0.22237804384487,0,0,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0,1.1270773567308,0,0.193952487167626,0,0.189709611372772,0.295220295959204,0.627994911365499,0,0.296452627087149,0,0.196558995113203,0.899448449539415,0.405720242777006,0.241177159752417,0.50925170356284,0,2.43202840162553,0.823684239564244,18.6898668485561,0.744281895337007,0.936113019343682,0,0,0.482443521363367,1.66277871149944,0,0.162964976442026,0.339490171550376,0.704070744865506,0,0.238043640886014,0.195133647857799,0.788175720530955,1.10732344824387,1.11618338060241,1.80249646187312,2.76295970985433,0.867894351489069,16.5870412333199,48.4076058598651,0,0.551873492609465,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0.178065603667255,0.325773918707152,0.659880491890142,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0.42366414172764,0,0,0.161464426695906,0.301564624640779,0.119372344003136,0,0.291480836629851,0.370850604021019,5.80960994712699,0.412773735926445,1.85194527369712,4.70921142511728,8.20165366326151,5.71945433016307,0,0.139951452323658,0.276399947608848,0.954670618015114,0.316335993581135,0.406638934253697,0,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0.523511883968059,0.777689839750757,0.621339313086926,0.56369293868419,0,0,0,0,0.337912250981556,0,0.2604087696879,0.104859344425711,0.241584120826006,0,0.948033361884535,0,0.102710957164827,0.389762468933385,0.358053391334963,0.198681354781265,0,0,0.302899349844443,0.381034033274999,0.705783295957884,1.55932609183604,0.577271049841977,0.467507608726276,0,0,0,0,0,1.12609485270709,1.28206136987086,0,0,1.12950368523413,0,0.572895513439397,1.03111909406213,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421|short_description=p@chr13:103496926..103496929,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:103496926..103496929,+ | |||
|description=CAGE_peak_at_chr13:103496926..103496929,+ | |||
|id=chr13:103496926..103496929,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.42e-08,25;CL:0000553,2.86e-08,6;CL:0000556,2.86e-08,6;CL:0000839,3.95e-08,13;CL:0002476,1.13e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.63e-09!193;UBERON:0004120!3.63e-09!193;UBERON:0006603!3.63e-09!193;UBERON:0002405!3.92e-07!70;UBERON:0001474!4.84e-07!22;UBERON:0004765!4.84e-07!22;UBERON:0001434!4.84e-07!22;UBERON:0002193!5.89e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.35e-13,6;UBERON:0004457,8.35e-13,6;UBERON:0000042,8.35e-13,6;UBERON:0004854,8.35e-13,6;UBERON:0009034,8.35e-13,6;UBERON:0002095,8.35e-13,6;UBERON:0004782,8.35e-13,6;UBERON:0003281,8.35e-13,6;UBERON:0009664,8.35e-13,6;UBERON:0002296,8.35e-13,6;UBERON:0005602,8.35e-13,6;UBERON:0001179,8.35e-13,6;UBERON:0006293,8.35e-13,6;UBERON:0002193,3.08e-11,48;UBERON:0002405,3.08e-11,48;UBERON:0002371,3.19e-11,16;UBERON:0002390,1.82e-10,45;UBERON:0003061,1.82e-10,45;UBERON:0001474,7.31e-10,22;UBERON:0004765,7.31e-10,22;UBERON:0001434,7.31e-10,22;UBERON:0003887,1.52e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.999329285446988,0.809901069559304,2.09868563438444,8.99067171270977,7.81552271552711,1.69755860719212,0.0850432901510698,5.56029326724958,2.61199789138935,0.95995453676044,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,7.88578248471361,0,0,0,0.85960031981627,0,0,0,0,0,0,3.5995988691256,0.988866362566974,2.8419204597844,0,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0,0,0,0.383062014255563,0,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,3.88406825470758,0.593768556259299,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0.376999773989026,0,0.144599356919912,0.884610551949874,0.808834249737046,2.87093973998512,0.484875253135222,0,0,0.209446706813455,0,0.239630249011841,0.599902730993408,0.381210681219194,0.449371918214468,0,0,0,0.255715457330331,0.41557608911912,0.324482526135515,0.509196819251581,0.746441823660558,0.252722758433675,0.420883711772948,0.130120442962704,0,0.180062129805349,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0,0,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.658650345873152,0.134206418760372,0.420579897128254,0,0,0.264450566663544,0.213288250535234,0.464473343720877,0,0.403367049246685,0.22237804384487,0,0,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0,1.1270773567308,0,0.193952487167626,0,0.189709611372772,0.295220295959204,0.627994911365499,0,0.296452627087149,0,0.196558995113203,0.899448449539415,0.405720242777006,0.241177159752417,0.50925170356284,0,2.43202840162553,0.823684239564244,18.6898668485561,0.744281895337007,0.936113019343682,0,0,0.482443521363367,1.66277871149944,0,0.162964976442026,0.339490171550376,0.704070744865506,0,0.238043640886014,0.195133647857799,0.788175720530955,1.10732344824387,1.11618338060241,1.80249646187312,2.76295970985433,0.867894351489069,16.5870412333199,48.4076058598651,0,0.551873492609465,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0.178065603667255,0.325773918707152,0.659880491890142,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0.42366414172764,0,0,0.161464426695906,0.301564624640779,0.119372344003136,0,0.291480836629851,0.370850604021019,5.80960994712699,0.412773735926445,1.85194527369712,4.70921142511728,8.20165366326151,5.71945433016307,0,0.139951452323658,0.276399947608848,0.954670618015114,0.316335993581135,0.406638934253697,0,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0.523511883968059,0.777689839750757,0.621339313086926,0.56369293868419,0,0,0,0,0.337912250981556,0,0.2604087696879,0.104859344425711,0.241584120826006,0,0.948033361884535,0,0.102710957164827,0.389762468933385,0.358053391334963,0.198681354781265,0,0,0.302899349844443,0.381034033274999,0.705783295957884,1.55932609183604,0.577271049841977,0.467507608726276,0,0,0,0,0,1.12609485270709,1.28206136987086,0,0,1.12950368523413,0,0.572895513439397,1.03111909406213,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr13:103496926..103496929,+ | |||
}} |
Latest revision as of 13:10, 5 August 2015
Short description: | p@chr13:103496926..103496929, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:103496926..103496929, + |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.42e-08 | 25 |
megakaryocyte progenitor cell | 2.86e-08 | 6 |
megakaryocyte | 2.86e-08 | 6 |
myeloid lineage restricted progenitor cell | 3.95e-08 | 13 |
bone marrow macrophage | 1.13e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.35e-13 | 6 |
cavity lining | 8.35e-13 | 6 |
serous membrane | 8.35e-13 | 6 |
gastrointestinal system mesentery | 8.35e-13 | 6 |
stomach region | 8.35e-13 | 6 |
mesentery | 8.35e-13 | 6 |
gastrointestinal system serosa | 8.35e-13 | 6 |
mesentery of stomach | 8.35e-13 | 6 |
gut mesentery | 8.35e-13 | 6 |
dorsal mesentery | 8.35e-13 | 6 |
dorsal mesogastrium | 8.35e-13 | 6 |
peritoneal cavity | 8.35e-13 | 6 |
spleen primordium | 8.35e-13 | 6 |
hemolymphoid system | 3.08e-11 | 48 |
immune system | 3.08e-11 | 48 |
bone marrow | 3.19e-11 | 16 |
hematopoietic system | 1.82e-10 | 45 |
blood island | 1.82e-10 | 45 |
bone element | 7.31e-10 | 22 |
skeletal element | 7.31e-10 | 22 |
skeletal system | 7.31e-10 | 22 |
intraembryonic coelom | 1.52e-07 | 10 |