FFCP PHASE1:Mm9::chr13:106234341..106234351,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=705 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:106234341..106234351,+ | |||
|description=CAGE_peak_at_chr13:106234341..106234351,+ | |description=CAGE_peak_at_chr13:106234341..106234351,+ | ||
|id=chr13:106234341..106234351,+ | |id=chr13:106234341..106234351,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.48e-14!23;CL:0000337!1.48e-14!23;CL:0000540!5.03e-09!33;CL:0000047!5.03e-09!33;CL:0000031!5.03e-09!33;CL:0000404!5.03e-09!33;CL:0000393!4.24e-07!39;CL:0000211!4.24e-07!39;CL:0002319!5.19e-07!43;CL:0002610!6.55e-07!3;CL:0000221!9.05e-07!44;CL:0000133!9.05e-07!44 | |ontology_enrichment_celltype=CL:0000117!1.48e-14!23;CL:0000337!1.48e-14!23;CL:0000540!5.03e-09!33;CL:0000047!5.03e-09!33;CL:0000031!5.03e-09!33;CL:0000404!5.03e-09!33;CL:0000393!4.24e-07!39;CL:0000211!4.24e-07!39;CL:0002319!5.19e-07!43;CL:0002610!6.55e-07!3;CL:0000221!9.05e-07!44;CL:0000133!9.05e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.77e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.22e-20!52;UBERON:0005068!2.22e-20!52;UBERON:0006241!2.22e-20!52;UBERON:0007135!2.22e-20!52;UBERON:0000073!3.70e-20!75;UBERON:0001016!3.70e-20!75;UBERON:0002020!1.31e-19!34;UBERON:0001017!1.34e-19!73;UBERON:0005743!1.34e-19!73;UBERON:0002616!7.19e-19!49;UBERON:0000955!2.35e-18!50;UBERON:0006238!2.35e-18!50;UBERON:0000033!2.14e-14!63;UBERON:0003080!2.65e-14!40;UBERON:0002346!3.72e-14!71;UBERON:0003075!3.72e-14!71;UBERON:0007284!3.72e-14!71;UBERON:0004121!1.51e-13!102;UBERON:0000924!1.51e-13!102;UBERON:0006601!1.51e-13!102;UBERON:0002791!3.20e-13!29;UBERON:0003528!3.20e-13!29;UBERON:0001893!3.20e-13!29;UBERON:0002780!5.19e-13!39;UBERON:0001890!5.19e-13!39;UBERON:0006240!5.19e-13!39;UBERON:0003056!6.27e-12!49;UBERON:0000956!5.71e-11!21;UBERON:0001869!5.71e-11!21;UBERON:0000203!5.71e-11!21;UBERON:0002619!3.15e-10!17;UBERON:0001948!4.45e-09!5;UBERON:0002315!4.45e-09!5;UBERON:0007811!9.64e-09!86;UBERON:0000153!3.29e-08!94;UBERON:0002240!1.72e-07!6;UBERON:0005174!1.72e-07!6;UBERON:0001137!1.72e-07!6;UBERON:0002021!4.47e-07!10;UBERON:0000411!4.47e-07!10;UBERON:0001950!4.47e-07!10;UBERON:0003076!6.42e-07!12;UBERON:0003057!6.42e-07!12;UBERON:0004684!6.55e-07!3;UBERON:0002275!6.55e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.37e-17,17;UBERON:0000956,5.65e-14,21;UBERON:0001869,5.65e-14,21;UBERON:0000203,5.65e-14,21;UBERON:0001954,3.95e-11,7;UBERON:0003022,3.95e-11,7;UBERON:0002421,3.95e-11,7;UBERON:0000349,3.95e-11,7;UBERON:0002600,3.95e-11,7;UBERON:0003528,2.61e-10,29;UBERON:0002791,2.61e-10,29;UBERON:0001893,2.61e-10,29;UBERON:0002020,6.93e-09,34;UBERON:0000073,1.10e-08,54;UBERON:0002021,6.49e-08,10;UBERON:0000411,6.49e-08,10;UBERON:0001950,6.49e-08,10;UBERON:0002780,8.01e-08,39;UBERON:0001890,8.01e-08,39;UBERON:0006240,8.01e-08,39;UBERON:0003080,1.22e-07,40;UBERON:0004684,4.77e-07,3;UBERON:0002275,4.77e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.244981598429908,0.191690942036473,0,1.10115880999389,0.510749352340751,0.46081959976873,0.131886287730194,0.274462930807229,0,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,0.457500602818626,0.376963056338593,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0,0,1.03552062350364,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.436039249896986,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.244981598429908,0.191690942036473,0,1.10115880999389,0.510749352340751,0.46081959976873,0.131886287730194,0.274462930807229,0,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,0.457500602818626,0.376963056338593,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0,0,1.03552062350364,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.436039249896986,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr13:106234341..106234351,+ | |short_description=p@chr13:106234341..106234351,+ | ||
}} | }} |
Latest revision as of 13:55, 5 August 2015
Short description: | p@chr13:106234341..106234351, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:106234341..106234351, + |
Coexpression cluster: | MCL_coexpression_mm9:705 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.37e-17 | 17 |
cerebral cortex | 5.65e-14 | 21 |
cerebral hemisphere | 5.65e-14 | 21 |
pallium | 5.65e-14 | 21 |
Ammon's horn | 3.95e-11 | 7 |
lobe parts of cerebral cortex | 3.95e-11 | 7 |
hippocampal formation | 3.95e-11 | 7 |
limbic system | 3.95e-11 | 7 |
limbic lobe | 3.95e-11 | 7 |
brain grey matter | 2.61e-10 | 29 |
regional part of telencephalon | 2.61e-10 | 29 |
telencephalon | 2.61e-10 | 29 |
gray matter | 6.93e-09 | 34 |
regional part of nervous system | 1.10e-08 | 54 |
occipital lobe | 6.49e-08 | 10 |
visual cortex | 6.49e-08 | 10 |
neocortex | 6.49e-08 | 10 |
regional part of forebrain | 8.01e-08 | 39 |
forebrain | 8.01e-08 | 39 |
future forebrain | 8.01e-08 | 39 |
anterior neural tube | 1.22e-07 | 40 |
raphe nuclei | 4.77e-07 | 3 |
reticular formation | 4.77e-07 | 3 |