FFCP PHASE1:Mm9::chr6:36337845..36337861,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:36337845..36337861,-
|short_description=p1@ENSMUST00000101535
|description=CAGE_peak_1_at_ENSMUST00000101535_5end
|association_with_transcript=0bp_to_ENSMU...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1826 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000101535_5end | |||
|cluster_id=chr6:36337845..36337861,- | |||
|description=CAGE_peak_1_at_ENSMUST00000101535_5end | |||
|id=chr6:36337845..36337861,- | |||
|ontology_enrichment_celltype=CL:0000540!1.42e-10!33;CL:0000047!1.42e-10!33;CL:0000031!1.42e-10!33;CL:0000404!1.42e-10!33;CL:0000393!5.24e-08!39;CL:0000211!5.24e-08!39;CL:0000107!1.15e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.61e-11,33;CL:0000047,2.61e-11,33;CL:0000031,2.61e-11,33;CL:0000404,2.61e-11,33;CL:0000107,1.23e-10,9;CL:0000393,2.57e-09,39;CL:0000211,2.57e-09,39;CL:0002319,3.68e-07,43;CL:0000221,7.37e-07,44;CL:0000133,7.37e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.57e-09!73;UBERON:0005743!3.57e-09!73;UBERON:0000073!1.77e-08!75;UBERON:0001016!1.77e-08!75;UBERON:0002410!1.15e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.23e-10,9;UBERON:0001017,9.35e-09,73;UBERON:0001016,2.89e-08,75;UBERON:0002240,3.19e-08,6;UBERON:0005174,3.19e-08,6;UBERON:0001137,3.19e-08,6;UBERON:0000010,3.21e-08,11;UBERON:0001948,3.50e-07,5;UBERON:0002315,3.50e-07,5;UBERON:0003076,4.15e-07,12;UBERON:0003057,4.15e-07,12 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,1.82084814773638,2.64495489636016,0,0,0,0,0,0,0,0,0.103689612308478,0,0,4.85606673486466,4.8591079009355,0.367472397644862,0.287536413054709,0,2.20231761998777,2.29837208553338,3.22573719838111,0.659431438650969,0.731901148819277,0.52091337055676,1.67509799400829,0,1.98637722109853,14.4368006882097,8.96941589034349,4.47358669980721,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,1.86391761218122,1.17112318804619,0.209446706813455,0.510914110417183,0,0,0,5.39246301857362,1.83000241127451,2.63874139437015,0.521472960576829,0.255715457330331,2.90903262383384,0.648965052271031,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0.384341160854549,0.0937017245597288,1.29351685369508,0,0.189106080167819,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0.36012412292203,0.473489471170421,0.590292695242212,0.771335564436891,0,0.536546802799238,0.700592054203017,0.493679549740441,1.80584210487005,0.891756905004413,1.75439984910399,1.97595103761946,1.07365135008297,0.420579897128254,0.205809224758569,0,0.528901133327089,3.41261200856374,3.48355007790658,6.05677068213839,5.44545516483025,4.22518283305254,2.66315876557583,0.949058123089023,2.63518327558417,2.5133520880027,1.59165177632921,0.974820435595601,2.69645822596266,0.864552199498777,0.796565093017469,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0,0.678980343100753,1.17345124144251,0.167506257441816,1.42826184531608,0.585400943573396,1.10344600874334,0.8858587585951,0.797273843287435,1.63863314715738,0.690739927463582,1.73578870297814,0,0,0,0,2.40825884981688,3.16471553798949,0,0,5.99465616890888,9.37052986311932,9.90947629570875,1.91175038362042,2.45078541490634,1.98153571552183,4.85772842009873,5.84511715822624,3.55759000151871,11.5675673911851,0,0,0,0,0,0,0,0,0,1.22974059177571,0,0.363533729477506,0,1.26414703174326,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,4.63563255026274,0,0.619160603889667,0.555583582109135,0,0,0,0,0,0,1.90934123603023,2.37251995185852,5.08298667817122,4.75223499615926,6.48173717644853,5.02233896616208,4.04593039154462,2.81021749466142,0.785267825952089,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,1.3748254587495,2.05524755931193,1.5107877947794,0,0.900642406448441,0,0,0.103787347584177,0.399024873401031,0.341467211508268,1.45864030240976,1.25767897576789,1.47074806760011,1.11123363900808,2.67845574410562,1.28367683836726,0.758091635291392,2.28131369901216,1.13175804831646,1.21733959710847,1.53660365771686,1.43588672389033,2.38146845641537,1.15884325944855,1.15745532278223,0.412085900803307,1.47198920134397,1.71434626192708,0.354951612318675,0.953744759789284,1.30811774969096,0.941093804153306,1.01537529470012,1.09756783723664,1.8414879800649,1.90125759384206,0,1.06771516311757,0.886540341380071,0.818462086339379,0.77468420592983,1.54325288784913,0.499621155875892,0.935726433781634,1.28922632428979,0.382576664137687,0.441182838239031,0.463735671240843 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,1.82084814773638,2.64495489636016,0,0,0,0,0,0,0,0,0.103689612308478,0,0,4.85606673486466,4.8591079009355,0.367472397644862,0.287536413054709,0,2.20231761998777,2.29837208553338,3.22573719838111,0.659431438650969,0.731901148819277,0.52091337055676,1.67509799400829,0,1.98637722109853,14.4368006882097,8.96941589034349,4.47358669980721,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,1.86391761218122,1.17112318804619,0.209446706813455,0.510914110417183,0,0,0,5.39246301857362,1.83000241127451,2.63874139437015,0.521472960576829,0.255715457330331,2.90903262383384,0.648965052271031,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0.384341160854549,0.0937017245597288,1.29351685369508,0,0.189106080167819,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0.36012412292203,0.473489471170421,0.590292695242212,0.771335564436891,0,0.536546802799238,0.700592054203017,0.493679549740441,1.80584210487005,0.891756905004413,1.75439984910399,1.97595103761946,1.07365135008297,0.420579897128254,0.205809224758569,0,0.528901133327089,3.41261200856374,3.48355007790658,6.05677068213839,5.44545516483025,4.22518283305254,2.66315876557583,0.949058123089023,2.63518327558417,2.5133520880027,1.59165177632921,0.974820435595601,2.69645822596266,0.864552199498777,0.796565093017469,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0,0.678980343100753,1.17345124144251,0.167506257441816,1.42826184531608,0.585400943573396,1.10344600874334,0.8858587585951,0.797273843287435,1.63863314715738,0.690739927463582,1.73578870297814,0,0,0,0,2.40825884981688,3.16471553798949,0,0,5.99465616890888,9.37052986311932,9.90947629570875,1.91175038362042,2.45078541490634,1.98153571552183,4.85772842009873,5.84511715822624,3.55759000151871,11.5675673911851,0,0,0,0,0,0,0,0,0,1.22974059177571,0,0.363533729477506,0,1.26414703174326,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,4.63563255026274,0,0.619160603889667,0.555583582109135,0,0,0,0,0,0,1.90934123603023,2.37251995185852,5.08298667817122,4.75223499615926,6.48173717644853,5.02233896616208,4.04593039154462,2.81021749466142,0.785267825952089,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,1.3748254587495,2.05524755931193,1.5107877947794,0,0.900642406448441,0,0,0.103787347584177,0.399024873401031,0.341467211508268,1.45864030240976,1.25767897576789,1.47074806760011,1.11123363900808,2.67845574410562,1.28367683836726,0.758091635291392,2.28131369901216,1.13175804831646,1.21733959710847,1.53660365771686,1.43588672389033,2.38146845641537,1.15884325944855,1.15745532278223,0.412085900803307,1.47198920134397,1.71434626192708,0.354951612318675,0.953744759789284,1.30811774969096,0.941093804153306,1.01537529470012,1.09756783723664,1.8414879800649,1.90125759384206,0,1.06771516311757,0.886540341380071,0.818462086339379,0.77468420592983,1.54325288784913,0.499621155875892,0.935726433781634,1.28922632428979,0.382576664137687,0.441182838239031,0.463735671240843 | ||
|short_description=p1@ENSMUST00000101535 | |||
}} | }} |
Latest revision as of 15:15, 5 August 2015
Short description: | p1@ENSMUST00000101535 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000101535_5end |
Coexpression cluster: | MCL_coexpression_mm9:1826 |
Association with transcript: | 0bp_to_ENSMUST00000101535_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.61e-11 | 33 |
neuronal stem cell | 2.61e-11 | 33 |
neuroblast | 2.61e-11 | 33 |
electrically signaling cell | 2.61e-11 | 33 |
autonomic neuron | 1.23e-10 | 9 |
electrically responsive cell | 2.57e-09 | 39 |
electrically active cell | 2.57e-09 | 39 |
neural cell | 3.68e-07 | 43 |
ectodermal cell | 7.37e-07 | 44 |
neurectodermal cell | 7.37e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.23e-10 | 9 |
central nervous system | 9.35e-09 | 73 |
nervous system | 2.89e-08 | 75 |
spinal cord | 3.19e-08 | 6 |
dorsal region element | 3.19e-08 | 6 |
dorsum | 3.19e-08 | 6 |
peripheral nervous system | 3.21e-08 | 11 |
regional part of spinal cord | 3.50e-07 | 5 |
gray matter of spinal cord | 3.50e-07 | 5 |
posterior neural tube | 4.15e-07 | 12 |
chordal neural plate | 4.15e-07 | 12 |