FFCP PHASE1:Mm9::chr18:34671622..34671653,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=255 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:34671622..34671653,- | |||
|description=CAGE_peak_at_chr18:34671622..34671653,- | |description=CAGE_peak_at_chr18:34671622..34671653,- | ||
|id=chr18:34671622..34671653,- | |id=chr18:34671622..34671653,- | ||
|ontology_enrichment_celltype=CL:0000117!2.52e-19!23;CL:0000337!2.52e-19!23;CL:0000393!9.66e-16!39;CL:0000211!9.66e-16!39;CL:0000540!1.09e-15!33;CL:0000047!1.09e-15!33;CL:0000031!1.09e-15!33;CL:0000404!1.09e-15!33;CL:0000548!8.85e-15!115;CL:0000004!8.85e-15!115;CL:0000255!8.85e-15!115;CL:0000221!1.24e-14!44;CL:0000133!1.24e-14!44;CL:0002371!3.62e-14!118;CL:0000055!1.04e-13!50;CL:0002319!1.10e-13!43;CL:0000144!1.38e-13!121;CL:0000012!1.38e-13!121;CL:0002321!1.77e-13!70;CL:0000220!1.77e-13!70;CL:0000723!1.68e-11!91;CL:0000048!1.68e-11!91;CL:0000034!2.51e-10!97;CL:0000764!1.46e-07!3;CL:0000765!1.46e-07!3;CL:0000038!1.46e-07!3;CL:0000547!1.46e-07!3;CL:0002609!6.03e-07!6;CL:0002614!8.67e-07!3 | |ontology_enrichment_celltype=CL:0000117!2.52e-19!23;CL:0000337!2.52e-19!23;CL:0000393!9.66e-16!39;CL:0000211!9.66e-16!39;CL:0000540!1.09e-15!33;CL:0000047!1.09e-15!33;CL:0000031!1.09e-15!33;CL:0000404!1.09e-15!33;CL:0000548!8.85e-15!115;CL:0000004!8.85e-15!115;CL:0000255!8.85e-15!115;CL:0000221!1.24e-14!44;CL:0000133!1.24e-14!44;CL:0002371!3.62e-14!118;CL:0000055!1.04e-13!50;CL:0002319!1.10e-13!43;CL:0000144!1.38e-13!121;CL:0000012!1.38e-13!121;CL:0002321!1.77e-13!70;CL:0000220!1.77e-13!70;CL:0000723!1.68e-11!91;CL:0000048!1.68e-11!91;CL:0000034!2.51e-10!97;CL:0000764!1.46e-07!3;CL:0000765!1.46e-07!3;CL:0000038!1.46e-07!3;CL:0000547!1.46e-07!3;CL:0002609!6.03e-07!6;CL:0002614!8.67e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.46e-25,3;CL:0000765,1.46e-25,3;CL:0000038,1.46e-25,3;CL:0000547,1.46e-25,3;CL:0002614,1.21e-11,3;CL:0000050,6.06e-09,9 | |||
|ontology_enrichment_disease=DOID:2531!1.46e-07!3;DOID:0060083!1.46e-07!3;DOID:1240!1.46e-07!3 | |ontology_enrichment_disease=DOID:2531!1.46e-07!3;DOID:0060083!1.46e-07!3;DOID:1240!1.46e-07!3 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.46e-25,3;DOID:0060083,1.46e-25,3;DOID:1240,1.46e-25,3;DOID:0050686,3.99e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0002420!2.44e-08!8;UBERON:0007245!2.44e-08!8;UBERON:0010009!2.44e-08!8;UBERON:0010011!2.44e-08!8;UBERON:0000454!2.44e-08!8;UBERON:0000344!2.51e-08!15;UBERON:0002020!1.88e-07!34;UBERON:0002038!8.67e-07!3;UBERON:0002308!8.67e-07!3;UBERON:0009663!8.67e-07!3;UBERON:0009661!8.67e-07!3;UBERON:0006331!8.67e-07!3;UBERON:0000125!8.67e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.21e-11,3;UBERON:0009663,1.21e-11,3;UBERON:0009661,1.21e-11,3;UBERON:0000125,1.21e-11,3;UBERON:0002308,1.21e-11,3;UBERON:0002420,1.61e-09,8;UBERON:0007245,1.61e-09,8;UBERON:0010009,1.61e-09,8;UBERON:0010011,1.61e-09,8;UBERON:0000454,1.61e-09,8;UBERON:0003199,3.65e-09,1;UBERON:0002950,5.82e-09,4;UBERON:0001891,5.82e-09,4;UBERON:0009616,5.82e-09,4;UBERON:0010286,5.82e-09,4 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.700837921786577,0.129123323441576,0,0,0,0.478632953972018,0,0.437102012094987,0,0,0,0,0,0,2.29616883407888,0,0,0.159992422793407,1.14704640533585,0,0,0.430942465371778,0.760093677825496,0.252030129759931,0.443461021310609,5.71527606113668,6.76571266343027,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.630974884054146,0.285650984403804,0,0.244981598429908,0.287536413054709,0,0,0.510749352340751,0.46081959976873,0.395658863190582,0.274462930807229,1.04182674111352,1.3959149950069,2.25105044012672,0.30559649555362,0,0.711858403995515,0,0,0,0,0,0,0,0,0,1.12355536105401,2.04516387093669,0.779358013808606,0.70667914902068,0.14084341977668,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.700837921786577,0.129123323441576,0,0,0,0.478632953972018,0,0.437102012094987,0,0,0,0,0,0,2.29616883407888,0,0,0.159992422793407,1.14704640533585,0,0,0.430942465371778,0.760093677825496,0.252030129759931,0.443461021310609,5.71527606113668,6.76571266343027,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.630974884054146,0.285650984403804,0,0.244981598429908,0.287536413054709,0,0,0.510749352340751,0.46081959976873,0.395658863190582,0.274462930807229,1.04182674111352,1.3959149950069,2.25105044012672,0.30559649555362,0,0.711858403995515,0,0,0,0,0,0,0,0,0,1.12355536105401,2.04516387093669,0.779358013808606,0.70667914902068,0.14084341977668,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:34671622..34671653,- | |short_description=p@chr18:34671622..34671653,- | ||
}} | }} |
Latest revision as of 16:03, 5 August 2015
Short description: | p@chr18:34671622..34671653, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:34671622..34671653, - |
Coexpression cluster: | MCL_coexpression_mm9:255 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.46e-25 | 3 |
erythroblast | 1.46e-25 | 3 |
erythroid progenitor cell | 1.46e-25 | 3 |
proerythroblast | 1.46e-25 | 3 |
neuron of the substantia nigra | 1.21e-11 | 3 |
megakaryocyte-erythroid progenitor cell | 6.06e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.21e-11 | 3 |
telencephalic nucleus | 1.21e-11 | 3 |
midbrain nucleus | 1.21e-11 | 3 |
neural nucleus | 1.21e-11 | 3 |
nucleus of brain | 1.21e-11 | 3 |
basal ganglion | 1.61e-09 | 8 |
nuclear complex of neuraxis | 1.61e-09 | 8 |
aggregate regional part of brain | 1.61e-09 | 8 |
collection of basal ganglia | 1.61e-09 | 8 |
cerebral subcortex | 1.61e-09 | 8 |
egg chamber | 3.65e-09 | 1 |
regional part of midbrain | 5.82e-09 | 4 |
midbrain | 5.82e-09 | 4 |
presumptive midbrain | 5.82e-09 | 4 |
midbrain neural tube | 5.82e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.46e-25 | 3 |
immune system cancer | 1.46e-25 | 3 |
leukemia | 1.46e-25 | 3 |
organ system cancer | 3.99e-13 | 6 |