FFCP PHASE1:Mm9::chr6:40606408..40606419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=140 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:40606408..40606419,+ | |||
|description=CAGE_peak_at_chr6:40606408..40606419,+ | |description=CAGE_peak_at_chr6:40606408..40606419,+ | ||
|id=chr6:40606408..40606419,+ | |id=chr6:40606408..40606419,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.58e-07!6;CL:0000677!1.58e-07!6;CL:0000212!1.58e-07!6;CL:0000584!1.58e-07!6;CL:0002563!2.30e-07!9;CL:0002251!2.30e-07!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.30e-29!43;UBERON:0000344!2.32e-20!15;UBERON:0005409!6.82e-20!59;UBERON:0001242!8.48e-16!13;UBERON:0000060!8.48e-16!13;UBERON:0001262!8.48e-16!13;UBERON:0004786!8.48e-16!13;UBERON:0001007!3.26e-12!128;UBERON:0001555!3.26e-12!128;UBERON:0007026!3.26e-12!128;UBERON:0004119!6.24e-12!130;UBERON:0000925!6.24e-12!130;UBERON:0006595!6.24e-12!130;UBERON:0004923!7.16e-12!24;UBERON:0004921!3.21e-10!126;UBERON:0004185!3.21e-10!126;UBERON:0000331!7.28e-09!3;UBERON:0002116!7.28e-09!3;UBERON:0001204!7.28e-09!3;UBERON:0001168!7.28e-09!3;UBERON:0003350!2.30e-07!9;UBERON:0004808!2.30e-07!9;UBERON:0001277!2.30e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.12e-26,31;UBERON:0000344,2.09e-18,15;UBERON:0005409,6.02e-17,47;UBERON:0002108,6.99e-14,4;UBERON:0001962,3.20e-12,2;UBERON:0001961,3.20e-12,2;UBERON:0001744,3.20e-12,2;UBERON:0004923,2.65e-11,24;UBERON:0001242,2.79e-11,13;UBERON:0001262,2.79e-11,13;UBERON:0004786,2.79e-11,13;UBERON:0000331,1.21e-08,3;UBERON:0002116,1.21e-08,3;UBERON:0001204,1.21e-08,3;UBERON:0001168,1.21e-08,3;UBERON:0002465,1.89e-08,3;UBERON:0001007,1.99e-08,116;UBERON:0001555,1.99e-08,116;UBERON:0007026,1.99e-08,116;UBERON:0004119,2.97e-08,118;UBERON:0000925,2.97e-08,118;UBERON:0006595,2.97e-08,118;UBERON:0003199,8.26e-07,1 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,2.11724947914781,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,0,0,0.861884930743556,2.28028103347649,1.51218077855958,0.443461021310609,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.9409969323007,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,1.58670339998127,0,0,0,0.201683524623343,0.667134131534611,0.190225626112559,7.59246498471219,0.494096864172033,0.251335208800269,0.795825888164603,0.38992817423824,4.49409704327111,3.24207074812041,4.58024928485045,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,0.454999239389536,2.11724947914781,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,0,0,0.861884930743556,2.28028103347649,1.51218077855958,0.443461021310609,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.9409969323007,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,1.58670339998127,0,0,0,0.201683524623343,0.667134131534611,0.190225626112559,7.59246498471219,0.494096864172033,0.251335208800269,0.795825888164603,0.38992817423824,4.49409704327111,3.24207074812041,4.58024928485045,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:40606408..40606419,+ | |short_description=p@chr6:40606408..40606419,+ | ||
}} | }} |
Latest revision as of 16:55, 5 August 2015
Short description: | p@chr6:40606408..40606419, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:40606408..40606419, + |
Coexpression cluster: | MCL_coexpression_mm9:140 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.12e-26 | 31 |
mucosa | 2.09e-18 | 15 |
gastrointestinal system | 6.02e-17 | 47 |
small intestine | 6.99e-14 | 4 |
gut-associated lymphoid tissue | 3.20e-12 | 2 |
mucosa-associated lymphoid tissue | 3.20e-12 | 2 |
lymphoid tissue | 3.20e-12 | 2 |
organ component layer | 2.65e-11 | 24 |
intestinal mucosa | 2.79e-11 | 13 |
wall of intestine | 2.79e-11 | 13 |
gastrointestinal system mucosa | 2.79e-11 | 13 |
ileal mucosa | 1.21e-08 | 3 |
ileum | 1.21e-08 | 3 |
mucosa of small intestine | 1.21e-08 | 3 |
wall of small intestine | 1.21e-08 | 3 |
lymphoid system | 1.89e-08 | 3 |
digestive system | 1.99e-08 | 116 |
digestive tract | 1.99e-08 | 116 |
primitive gut | 1.99e-08 | 116 |
endoderm-derived structure | 2.97e-08 | 118 |
endoderm | 2.97e-08 | 118 |
presumptive endoderm | 2.97e-08 | 118 |
egg chamber | 8.26e-07 | 1 |