FFCP PHASE1:Mm9::chr9:95696301..95696305,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2318 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:95696301..95696305,- | |||
|description=CAGE_peak_at_chr9:95696301..95696305,- | |description=CAGE_peak_at_chr9:95696301..95696305,- | ||
|id=chr9:95696301..95696305,- | |id=chr9:95696301..95696305,- | ||
|ontology_enrichment_celltype=CL:0002563!1.02e-08!9;CL:0002251!1.02e-08!9;CL:0002076!1.60e-08!15;CL:0000066!3.69e-08!25;CL:0000239!2.43e-07!6;CL:0000677!2.43e-07!6;CL:0000212!2.43e-07!6;CL:0000584!2.43e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.02e-08!9;CL:0002251!1.02e-08!9;CL:0002076!1.60e-08!15;CL:0000066!3.69e-08!25;CL:0000239!2.43e-07!6;CL:0000677!2.43e-07!6;CL:0000212!2.43e-07!6;CL:0000584!2.43e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.96e-11,3;CL:0000066,1.12e-10,25;CL:0000068,4.93e-09,3;CL:0002202,4.93e-09,3;CL:0000069,4.93e-09,3;CL:0002632,4.93e-09,3;CL:0002368,4.93e-09,3;CL:0000307,4.93e-09,3;CL:0000377,4.93e-09,3;CL:0002076,5.97e-09,15;CL:0000239,1.58e-08,6;CL:0000677,1.58e-08,6;CL:0000584,1.58e-08,6;CL:0000075,2.58e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.55e-15!15;UBERON:0005409!9.62e-13!59;UBERON:0001242!1.17e-12!13;UBERON:0000060!1.17e-12!13;UBERON:0001262!1.17e-12!13;UBERON:0004786!1.17e-12!13;UBERON:0004923!2.80e-11!24;UBERON:0000160!4.78e-11!43;UBERON:0003350!1.02e-08!9;UBERON:0004808!1.02e-08!9;UBERON:0001277!1.02e-08!9;UBERON:0004119!1.62e-08!130;UBERON:0000925!1.62e-08!130;UBERON:0006595!1.62e-08!130;UBERON:0001007!1.13e-07!128;UBERON:0001555!1.13e-07!128;UBERON:0007026!1.13e-07!128 | |ontology_enrichment_uberon=UBERON:0000344!4.55e-15!15;UBERON:0005409!9.62e-13!59;UBERON:0001242!1.17e-12!13;UBERON:0000060!1.17e-12!13;UBERON:0001262!1.17e-12!13;UBERON:0004786!1.17e-12!13;UBERON:0004923!2.80e-11!24;UBERON:0000160!4.78e-11!43;UBERON:0003350!1.02e-08!9;UBERON:0004808!1.02e-08!9;UBERON:0001277!1.02e-08!9;UBERON:0004119!1.62e-08!130;UBERON:0000925!1.62e-08!130;UBERON:0006595!1.62e-08!130;UBERON:0001007!1.13e-07!128;UBERON:0001555!1.13e-07!128;UBERON:0007026!1.13e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.59e-20,47;UBERON:0000160,3.17e-14,31;UBERON:0000344,7.41e-13,15;UBERON:0001007,6.68e-11,116;UBERON:0001555,6.68e-11,116;UBERON:0007026,6.68e-11,116;UBERON:0004119,1.23e-10,118;UBERON:0000925,1.23e-10,118;UBERON:0006595,1.23e-10,118;UBERON:0003126,4.93e-09,3;UBERON:0001005,4.93e-09,3;UBERON:0007196,4.93e-09,3;UBERON:0001558,4.93e-09,3;UBERON:0004921,9.66e-09,114;UBERON:0001242,2.38e-08,13;UBERON:0001262,2.38e-08,13;UBERON:0004786,2.38e-08,13;UBERON:0001962,5.09e-08,2;UBERON:0001961,5.09e-08,2;UBERON:0001744,5.09e-08,2;UBERON:0004923,1.48e-07,24 | |||
|phase1_expression=0,1.39590163055744,4.54999239389536,0.60492842261366,0.500895729946347,3.02182689441402,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,7.51964387129011,7.34109699414944,4.01962374880514,7.32295393470427,5.17130958446134,0.760093677825496,0.504060259519861,4.21287970245079,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.01104889002957,0.79928715803342,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0.161766849947409,0,0,3.72783522436244,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,5.94753809370836,0.264450566663544,0,0,0,0,0,0.190225626112559,1.89811624617805,0.329397909448022,0.502670417600539,1.59165177632921,0.779856348476481,1.79763881730844,1.51296634912286,1.7922714592893,0,0,0,0.407302655690628,0.387904974335251,0.210407459670956,0.316182685621286,0.590440591918409,0.31399745568275,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,0,0.324016022465404,0,1.52853794622324,2.15782954215713,1.98368293740806,7.0674104335688,3.75883422546199,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,2.43987218086537,1.64836461840539,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0.377252682772152,0,0.256100609619477,0.114870937911227,0,0.347652977834566,0,0.412085900803307,0,0,0.354951612318675,0,0,0.188218760830661,0.25384382367503,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,1.39590163055744,4.54999239389536,0.60492842261366,0.500895729946347,3.02182689441402,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,7.51964387129011,7.34109699414944,4.01962374880514,7.32295393470427,5.17130958446134,0.760093677825496,0.504060259519861,4.21287970245079,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.01104889002957,0.79928715803342,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0.161766849947409,0,0,3.72783522436244,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,5.94753809370836,0.264450566663544,0,0,0,0,0,0.190225626112559,1.89811624617805,0.329397909448022,0.502670417600539,1.59165177632921,0.779856348476481,1.79763881730844,1.51296634912286,1.7922714592893,0,0,0,0.407302655690628,0.387904974335251,0.210407459670956,0.316182685621286,0.590440591918409,0.31399745568275,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,0,0.324016022465404,0,1.52853794622324,2.15782954215713,1.98368293740806,7.0674104335688,3.75883422546199,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,2.43987218086537,1.64836461840539,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0.377252682772152,0,0.256100609619477,0.114870937911227,0,0.347652977834566,0,0.412085900803307,0,0,0.354951612318675,0,0,0.188218760830661,0.25384382367503,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr9:95696301..95696305,- | |short_description=p@chr9:95696301..95696305,- | ||
}} | }} |
Latest revision as of 19:20, 5 August 2015
Short description: | p@chr9:95696301..95696305, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:95696301..95696305, - |
Coexpression cluster: | MCL_coexpression_mm9:2318 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.96e-11 | 3 |
epithelial cell | 1.12e-10 | 25 |
duct epithelial cell | 4.93e-09 | 3 |
epithelial cell of tracheobronchial tree | 4.93e-09 | 3 |
branched duct epithelial cell | 4.93e-09 | 3 |
epithelial cell of lower respiratory tract | 4.93e-09 | 3 |
respiratory epithelial cell | 4.93e-09 | 3 |
tracheal epithelial cell | 4.93e-09 | 3 |
tracheoblast | 4.93e-09 | 3 |
endo-epithelial cell | 5.97e-09 | 15 |
brush border epithelial cell | 1.58e-08 | 6 |
gut absorptive cell | 1.58e-08 | 6 |
enterocyte | 1.58e-08 | 6 |
columnar/cuboidal epithelial cell | 2.58e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.59e-20 | 47 |
intestine | 3.17e-14 | 31 |
mucosa | 7.41e-13 | 15 |
digestive system | 6.68e-11 | 116 |
digestive tract | 6.68e-11 | 116 |
primitive gut | 6.68e-11 | 116 |
endoderm-derived structure | 1.23e-10 | 118 |
endoderm | 1.23e-10 | 118 |
presumptive endoderm | 1.23e-10 | 118 |
trachea | 4.93e-09 | 3 |
respiratory airway | 4.93e-09 | 3 |
tracheobronchial tree | 4.93e-09 | 3 |
lower respiratory tract | 4.93e-09 | 3 |
subdivision of digestive tract | 9.66e-09 | 114 |
intestinal mucosa | 2.38e-08 | 13 |
wall of intestine | 2.38e-08 | 13 |
gastrointestinal system mucosa | 2.38e-08 | 13 |
gut-associated lymphoid tissue | 5.09e-08 | 2 |
mucosa-associated lymphoid tissue | 5.09e-08 | 2 |
lymphoid tissue | 5.09e-08 | 2 |
organ component layer | 1.48e-07 | 24 |