FFCP PHASE1:Mm9::chr18:52687395..52687418,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1412 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:52687395..52687418,- | |||
|description=CAGE_peak_at_chr18:52687395..52687418,- | |description=CAGE_peak_at_chr18:52687395..52687418,- | ||
|id=chr18:52687395..52687418,- | |id=chr18:52687395..52687418,- | ||
|ontology_enrichment_celltype=CL:0000680!8.79e-10!6;CL:0000183!8.79e-10!6;CL:0000187!8.79e-10!6;CL:0000056!8.79e-10!6;CL:0000222!2.61e-08!7;CL:0000192!7.07e-08!3;CL:0000359!7.07e-08!3;CL:0002539!7.07e-08!3;CL:0000514!7.07e-08!3 | |ontology_enrichment_celltype=CL:0000680!8.79e-10!6;CL:0000183!8.79e-10!6;CL:0000187!8.79e-10!6;CL:0000056!8.79e-10!6;CL:0000222!2.61e-08!7;CL:0000192!7.07e-08!3;CL:0000359!7.07e-08!3;CL:0002539!7.07e-08!3;CL:0000514!7.07e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.41e-17,3;CL:0000359,3.41e-17,3;CL:0002539,3.41e-17,3;CL:0000514,3.41e-17,3;CL:0000680,4.19e-09,6;CL:0000187,4.19e-09,6;CL:0000056,4.19e-09,6;CL:0000222,6.16e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001135!7.07e-08!3;UBERON:0004237!7.07e-08!3;UBERON:0004695!7.07e-08!3;UBERON:0002111!7.07e-08!3;UBERON:0004178!7.07e-08!3;UBERON:0004871!8.15e-07!3 | |ontology_enrichment_uberon=UBERON:0001135!7.07e-08!3;UBERON:0004237!7.07e-08!3;UBERON:0004695!7.07e-08!3;UBERON:0002111!7.07e-08!3;UBERON:0004178!7.07e-08!3;UBERON:0004871!8.15e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.41e-17,3;UBERON:0004237,3.41e-17,3;UBERON:0004695,3.41e-17,3;UBERON:0002111,3.41e-17,3;UBERON:0004178,3.41e-17,3;UBERON:0000947,3.67e-13,4;UBERON:0001637,3.67e-13,4;UBERON:0004573,3.67e-13,4;UBERON:0003509,3.67e-13,4;UBERON:0004571,3.67e-13,4;UBERON:0010191,3.67e-13,4;UBERON:0004572,3.67e-13,4;UBERON:0000055,9.88e-11,5;UBERON:0007500,9.88e-11,5;UBERON:0001981,9.88e-11,5;UBERON:0002049,9.88e-11,5;UBERON:0007798,9.88e-11,5;UBERON:0004537,9.88e-11,5;UBERON:0006965,9.88e-11,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.21652317463417,0.550640256485045,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,3.40860645156115,2.85764605063156,1.41335829804136,0,1.28326477414318,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0.130120442962704,0,0,0.452114453507145,0.204109497453984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0,5.24591825205361,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0.17230640686684,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.21652317463417,0.550640256485045,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,3.40860645156115,2.85764605063156,1.41335829804136,0,1.28326477414318,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0.130120442962704,0,0,0.452114453507145,0.204109497453984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0,5.24591825205361,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0.17230640686684,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:52687395..52687418,- | |short_description=p@chr18:52687395..52687418,- | ||
}} | }} |
Latest revision as of 20:59, 5 August 2015
Short description: | p@chr18:52687395..52687418, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:52687395..52687418, - |
Coexpression cluster: | MCL_coexpression_mm9:1412 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.41e-17 | 3 |
vascular associated smooth muscle cell | 3.41e-17 | 3 |
aortic smooth muscle cell | 3.41e-17 | 3 |
smooth muscle myoblast | 3.41e-17 | 3 |
muscle precursor cell | 4.19e-09 | 6 |
muscle cell | 4.19e-09 | 6 |
myoblast | 4.19e-09 | 6 |
mesodermal cell | 6.16e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.41e-17 | 3 |
blood vessel smooth muscle | 3.41e-17 | 3 |
arterial system smooth muscle | 3.41e-17 | 3 |
artery smooth muscle tissue | 3.41e-17 | 3 |
aorta smooth muscle tissue | 3.41e-17 | 3 |
aorta | 3.67e-13 | 4 |
artery | 3.67e-13 | 4 |
systemic artery | 3.67e-13 | 4 |
arterial blood vessel | 3.67e-13 | 4 |
systemic arterial system | 3.67e-13 | 4 |
aortic system | 3.67e-13 | 4 |
arterial system | 3.67e-13 | 4 |
vessel | 9.88e-11 | 5 |
epithelial tube open at both ends | 9.88e-11 | 5 |
blood vessel | 9.88e-11 | 5 |
vasculature | 9.88e-11 | 5 |
vascular system | 9.88e-11 | 5 |
blood vasculature | 9.88e-11 | 5 |
vascular cord | 9.88e-11 | 5 |