FFCP PHASE1:Mm9::chr8:109609306..109609317,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:109609306..109609317,-|id=chr8:109609306..109609317,-|ontology_enrichment_celltype=CL:0000548!4.54e-23!115;CL:0000004!4.54e-23!115;CL:0000255!4.54e-23!115;CL:0000144!1.59e-22!121;CL:0000012!1.59e-22!121;CL:0002371!1.66e-22!118;CL:0002321!5.67e-17!70;CL:0000220!5.67e-17!70;CL:0000034!3.28e-16!97;CL:0000723!8.18e-16!91;CL:0000048!8.18e-16!91;CL:0000055!1.89e-15!50;CL:0000393!5.11e-13!39;CL:0000211!5.11e-13!39;CL:0000221!1.00e-12!44;CL:0000133!1.00e-12!44;CL:0002319!1.02e-12!43;CL:0000540!1.79e-09!33;CL:0000047!1.79e-09!33;CL:0000031!1.79e-09!33;CL:0000404!1.79e-09!33;CL:0000063!8.03e-07!66|ontology_enrichment_celltype_v019_2=CL:0000723,6.82e-22,91;CL:0000048,6.82e-22,91;CL:0000034,3.08e-21,97;CL:0002321,7.95e-21,70;CL:0000393,1.30e-17,39;CL:0000211,1.30e-17,39;CL:0002319,4.80e-17,43;CL:0000221,2.07e-16,44;CL:0000133,2.07e-16,44;CL:0000540,4.98e-12,33;CL:0000047,4.98e-12,33;CL:0000031,4.98e-12,33;CL:0000404,4.98e-12,33;CL:0000219,1.49e-10,54;CL:0000107,7.77e-08,9;CL:0000680,8.33e-08,6;CL:0000187,8.33e-08,6;CL:0000056,8.33e-08,6;CL:0002320,1.10e-07,46;CL:0000134,1.10e-07,46;CL:0000117,7.17e-07,23;CL:0000337,7.17e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.69e-09,11;UBERON:0002410,7.77e-08,9;UBERON:0002384,1.10e-07,46|phase1_expression=0.160148847104794,3.14077866875425,1.81999695755814,0.90739263392049,2.00358291978539,3.86122325397347,6.54115393667472,4.64843964389675,0.563154888606667,7.49006484230379,1.19852577757853,8.85470964848234,0.856003649656029,3.05971408466491,0.666219523631325,0.202475267389826,0,1.10411757875383,0.411343300817216,1.27316895539409,3.74190476664707,0.695036658406197,0,3.35984087866154,2.75291137280604,2.8711598205751,3.01533397311352,4.09395342103189,2.85035129184561,4.28451220591882,7.76056787293567,6.35030673459631,8.61090702618398,0,0.288851619751275,0.831173226792462,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0,0,7.67970589651021,5.17022349219524,5.87349606917381,6.25913075478431,2.61630187656536,0.878744730937887,3.4997381833371,5.45947044338914,0,0.167782606057736,0.725362142011344,0,11.8339340576536,9.74213695791773,5.15672092277442,0.809265843438391,2.64495489636016,0.633831403506179,4.40497891689872,7.11435836888911,3.1496490104849,1.97773272513395,6.3943210345149,5.69240209984969,4.61061966385865,1.45165457231869,2.43010688997043,1.89292465216244,1.14260393761521,1.10434270475807,1.46988959057945,2.87536413054709,3.67687514644008,0,1.78762273319263,3.22573719838111,1.31886287730194,1.73826522844578,0.52091337055676,0.558365998002762,2.8138130501584,1.06958773443767,2.35702868378934,3.27454865837937,0.931997229126503,3.63485727999283,2.79614772395106,0.289864488701678,0,2.719885334831,4.31762553310254,0.649776417447669,0,4.77511028447956,6.81721290312231,12.2099422163348,5.3000936176551,0.563373679106722,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0.505524445014783,6.16592950482924,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0,0.23517741427141,0.376999773989026,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,0,0,0.359445373517761,1.19980546198682,0.254140454146129,0,0,0.125654352112864,0.347648640384553,0,0,0,0.203678727700633,0.746441823660558,0,0,0.910843100738926,0.459804208866946,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.411564272815887,0.59710280045548,1.40442637462647,1.28673953557358,0,0.207125772535502,0.469052119962192,1.08037236876609,0.473489471170421,0.393528463494808,0.308534225774757,0,0.268273401399619,0,0.329119699826961,0.164167464079095,0.162137619091711,0.438599962275997,0.658650345873152,0.536825675041487,0,0.205809224758569,0.330418782983798,2.11560453330835,0.213288250535234,0.464473343720877,0.257734922644187,0,0.22237804384487,0,0,0.329397909448022,1.50801125280162,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.775809948670503,0.420814919341911,0.442655759869801,0,0,0.616985819609003,0,0.166845105716094,0.196558995113203,0.449724224769707,0.811440485554012,0.241177159752417,0.50925170356284,1.43848068725405,0.324270453550071,0.274561413188081,0,1.11642284300551,0,0,0.358794827043824,0,0.184753190166605,0.947457058852424,0.162964976442026,0.339490171550376,1.40814148973101,0.502518772325447,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0,0,1.63171705145613,0,0,0.160550589987792,0.234423373184406,23.2787622434879,0.757412781613119,2.52406575533005,4.68526493155966,3.23135096599198,2.86762557543062,4.45597348164788,4.24614796183249,1.61924280669958,2.63030272120181,1.97643888973262,0.321321316421807,0.283880170416537,0.35613120733451,0.488660878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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:109609306..109609317,- | |||
|description=CAGE_peak_at_chr8:109609306..109609317,- | |||
|id=chr8:109609306..109609317,- | |||
|ontology_enrichment_celltype=CL:0000548!4.54e-23!115;CL:0000004!4.54e-23!115;CL:0000255!4.54e-23!115;CL:0000144!1.59e-22!121;CL:0000012!1.59e-22!121;CL:0002371!1.66e-22!118;CL:0002321!5.67e-17!70;CL:0000220!5.67e-17!70;CL:0000034!3.28e-16!97;CL:0000723!8.18e-16!91;CL:0000048!8.18e-16!91;CL:0000055!1.89e-15!50;CL:0000393!5.11e-13!39;CL:0000211!5.11e-13!39;CL:0000221!1.00e-12!44;CL:0000133!1.00e-12!44;CL:0002319!1.02e-12!43;CL:0000540!1.79e-09!33;CL:0000047!1.79e-09!33;CL:0000031!1.79e-09!33;CL:0000404!1.79e-09!33;CL:0000063!8.03e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,6.82e-22,91;CL:0000048,6.82e-22,91;CL:0000034,3.08e-21,97;CL:0002321,7.95e-21,70;CL:0000393,1.30e-17,39;CL:0000211,1.30e-17,39;CL:0002319,4.80e-17,43;CL:0000221,2.07e-16,44;CL:0000133,2.07e-16,44;CL:0000540,4.98e-12,33;CL:0000047,4.98e-12,33;CL:0000031,4.98e-12,33;CL:0000404,4.98e-12,33;CL:0000219,1.49e-10,54;CL:0000107,7.77e-08,9;CL:0000680,8.33e-08,6;CL:0000187,8.33e-08,6;CL:0000056,8.33e-08,6;CL:0002320,1.10e-07,46;CL:0000134,1.10e-07,46;CL:0000117,7.17e-07,23;CL:0000337,7.17e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.69e-09,11;UBERON:0002410,7.77e-08,9;UBERON:0002384,1.10e-07,46 | |||
|phase1_expression=0.160148847104794,3.14077866875425,1.81999695755814,0.90739263392049,2.00358291978539,3.86122325397347,6.54115393667472,4.64843964389675,0.563154888606667,7.49006484230379,1.19852577757853,8.85470964848234,0.856003649656029,3.05971408466491,0.666219523631325,0.202475267389826,0,1.10411757875383,0.411343300817216,1.27316895539409,3.74190476664707,0.695036658406197,0,3.35984087866154,2.75291137280604,2.8711598205751,3.01533397311352,4.09395342103189,2.85035129184561,4.28451220591882,7.76056787293567,6.35030673459631,8.61090702618398,0,0.288851619751275,0.831173226792462,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0,0,7.67970589651021,5.17022349219524,5.87349606917381,6.25913075478431,2.61630187656536,0.878744730937887,3.4997381833371,5.45947044338914,0,0.167782606057736,0.725362142011344,0,11.8339340576536,9.74213695791773,5.15672092277442,0.809265843438391,2.64495489636016,0.633831403506179,4.40497891689872,7.11435836888911,3.1496490104849,1.97773272513395,6.3943210345149,5.69240209984969,4.61061966385865,1.45165457231869,2.43010688997043,1.89292465216244,1.14260393761521,1.10434270475807,1.46988959057945,2.87536413054709,3.67687514644008,0,1.78762273319263,3.22573719838111,1.31886287730194,1.73826522844578,0.52091337055676,0.558365998002762,2.8138130501584,1.06958773443767,2.35702868378934,3.27454865837937,0.931997229126503,3.63485727999283,2.79614772395106,0.289864488701678,0,2.719885334831,4.31762553310254,0.649776417447669,0,4.77511028447956,6.81721290312231,12.2099422163348,5.3000936176551,0.563373679106722,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0.505524445014783,6.16592950482924,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0,0.23517741427141,0.376999773989026,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,0,0,0.359445373517761,1.19980546198682,0.254140454146129,0,0,0.125654352112864,0.347648640384553,0,0,0,0.203678727700633,0.746441823660558,0,0,0.910843100738926,0.459804208866946,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.411564272815887,0.59710280045548,1.40442637462647,1.28673953557358,0,0.207125772535502,0.469052119962192,1.08037236876609,0.473489471170421,0.393528463494808,0.308534225774757,0,0.268273401399619,0,0.329119699826961,0.164167464079095,0.162137619091711,0.438599962275997,0.658650345873152,0.536825675041487,0,0.205809224758569,0.330418782983798,2.11560453330835,0.213288250535234,0.464473343720877,0.257734922644187,0,0.22237804384487,0,0,0.329397909448022,1.50801125280162,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.775809948670503,0.420814919341911,0.442655759869801,0,0,0.616985819609003,0,0.166845105716094,0.196558995113203,0.449724224769707,0.811440485554012,0.241177159752417,0.50925170356284,1.43848068725405,0.324270453550071,0.274561413188081,0,1.11642284300551,0,0,0.358794827043824,0,0.184753190166605,0.947457058852424,0.162964976442026,0.339490171550376,1.40814148973101,0.502518772325447,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0,0,1.63171705145613,0,0,0.160550589987792,0.234423373184406,23.2787622434879,0.757412781613119,2.52406575533005,4.68526493155966,3.23135096599198,2.86762557543062,4.45597348164788,4.24614796183249,1.61924280669958,2.63030272120181,1.97643888973262,0.321321316421807,0.283880170416537,0.35613120733451,0.488660878060728,0.824850614862677,0,0.242780636154981,1.51161778482376,0.565815239267694,0,0.307435147943927,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,0,0.540183282093931,0.646793418913773,0.643011105094777,0.354680467284547,0.178368817602071,0.164549020602121,1.2178597964584,0.23467170806371,0.21183207086382,0.441056796109924,0.49465875882444,0.161464426695906,0.301564624640779,0.358117032009409,0.328281799490123,0.291480836629851,0,0.854354403989263,0.206386867963223,1.11116716421827,0.188368457004691,0.820165366326151,1.60144721244566,1.01987057996313,0.139951452323658,0.829199842826543,0.954670618015114,0,0.406638934253697,0.216010681643603,1.25452977608681,0.218362563746178,0.404593039154462,0.165306911450672,0,0.259229946583586,1.24267862617385,0,0.299033092087958,0.165458490457098,0.388902376688095,0.645799117388655,0.168956125490778,0.469428954583016,0.13020438484395,0.419437377702843,0.241584120826006,0,0.316011120628178,0.608175645870493,1.02710957164827,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0.403865799792591,0.304827226619999,0,0.292373642219257,0.288635524920988,0.116876902181569,0.226730383615211,2.44184548711471,0.358855426437903,0.671538465456314,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,1.24544817101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| |||
|short_description=p@chr8:109609306..109609317,- | |||
}} | |||
Latest revision as of 21:09, 5 August 2015
| Short description: | p@chr8:109609306..109609317, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr8:109609306..109609317, - |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| somatic stem cell | 6.82e-22 | 91 |
| multi fate stem cell | 6.82e-22 | 91 |
| stem cell | 3.08e-21 | 97 |
| embryonic cell | 7.95e-21 | 70 |
| electrically responsive cell | 1.30e-17 | 39 |
| electrically active cell | 1.30e-17 | 39 |
| neural cell | 4.80e-17 | 43 |
| ectodermal cell | 2.07e-16 | 44 |
| neurectodermal cell | 2.07e-16 | 44 |
| neuron | 4.98e-12 | 33 |
| neuronal stem cell | 4.98e-12 | 33 |
| neuroblast | 4.98e-12 | 33 |
| electrically signaling cell | 4.98e-12 | 33 |
| motile cell | 1.49e-10 | 54 |
| autonomic neuron | 7.77e-08 | 9 |
| muscle precursor cell | 8.33e-08 | 6 |
| muscle cell | 8.33e-08 | 6 |
| myoblast | 8.33e-08 | 6 |
| connective tissue cell | 1.10e-07 | 46 |
| mesenchymal cell | 1.10e-07 | 46 |
| CNS neuron (sensu Vertebrata) | 7.17e-07 | 23 |
| neuroblast (sensu Vertebrata) | 7.17e-07 | 23 |
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system | 2.69e-09 | 11 |
| autonomic nervous system | 7.77e-08 | 9 |
| connective tissue | 1.10e-07 | 46 |
