FFCP PHASE1:Mm9::chr8:11728070..11728095,+: Difference between revisions
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{{FFCP|EntrezGene=54126|HGNC=|MCL_coexpression_id=2476|UniProt=Q9ES28|association_with_transcript=-9bp_to_ENSMUST00000033908,ENSMUST00000110909,NM_001113517,uc009kvu.2,uc009kvv.2_5end|description=CAGE_peak_5_at_Arhgef7_5end|id=chr8:11728070..11728095,+|ontology_enrichment_celltype=CL:0000117!7.34e-11!23;CL:0000337!7.34e-11!23;CL:0000540!1.35e-10!33;CL:0000047!1.35e-10!33;CL:0000031!1.35e-10!33;CL:0000404!1.35e-10!33;CL:0000393!5.02e-08!39;CL:0000211!5.02e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.75e-12,23;CL:0000337,4.75e-12,23;CL:0000540,7.85e-10,33;CL:0000047,7.85e-10,33;CL:0000031,7.85e-10,33;CL:0000404,7.85e-10,33;CL:0000393,1.23e-07,39;CL:0000211,1.23e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!7.41e-15!114;UBERON:0004111!1.75e-12!122;UBERON:0000468!4.18e-10!333;UBERON:0001017!2.74e-08!73;UBERON:0005743!2.74e-08!73;UBERON:0000922!4.84e-08!328;UBERON:0002020!7.09e-08!34;UBERON:0000073!1.25e-07!75;UBERON:0001016!1.25e-07!75;UBERON:0007100!1.91e-07!18;UBERON:0000948!1.91e-07!18;UBERON:0005498!1.91e-07!18;UBERON:0004140!1.91e-07!18;UBERON:0009881!1.91e-07!18;UBERON:0004141!1.91e-07!18;UBERON:0003084!1.91e-07!18;UBERON:0007005!1.91e-07!18;UBERON:0004139!1.91e-07!18;UBERON:0004291!1.91e-07!18;UBERON:0003914!4.11e-07!47;UBERON:0004121!4.28e-07!102;UBERON:0000924!4.28e-07!102;UBERON:0006601!4.28e-07!102;UBERON:0002346!5.40e-07!71;UBERON:0003075!5.40e-07!71;UBERON:0007284!5.40e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.12e-09,114;UBERON:0007100,1.84e-08,18;UBERON:0000948,1.84e-08,18;UBERON:0005498,1.84e-08,18;UBERON:0004140,1.84e-08,18;UBERON:0009881,1.84e-08,18;UBERON:0004141,1.84e-08,18;UBERON:0003084,1.84e-08,18;UBERON:0007005,1.84e-08,18;UBERON:0004139,1.84e-08,18;UBERON:0004291,1.84e-08,18;UBERON:0004111,3.55e-08,122;UBERON:0003914,1.15e-07,47;UBERON:0002020,6.68e-07,34|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,2.0057340795713,0.515672092277442,4.04632921719196,3.70293685490423,5.70448263155561,0,0,0,0,0,0.299600110518405,0.768436610643109,6.11768712620018,4.86021377994086,6.52007380189284,2.28520787523043,1.54607978666129,7.83941114975706,7.3801012684042,8.27296907949019,1.10115880999389,2.55374676170375,0.921639199537461,5.80299666012853,5.85520919055422,7.29278718779464,1.11673199600552,0.56276261003168,1.5279824777681,3.53554302568401,3.13217697758026,3.54158947068071,0,0.226714680320357,0.289864488701678,2.58127163094416,5.439770669662,1.07940638327563,4.54843492213368,1.79210754838934,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.445326417194474,0.346970653532272,0.304465478312141,0.922461989024234,1.05505848386836,0.352766121407114,0.251333182659351,0.741584903203122,0.289198713839823,0,1.61766849947409,0.883366073841574,0.969750506270444,0,0.878342391034642,0.209446706813455,0,0,0,0,0.599162557619291,1.37250180845588,8.54449594367478,1.21677024134594,2.55715457330331,0.83115217823824,2.27137768294861,1.12023300235348,0.248813941220186,0,0.420883711772948,2.34216797332867,2.06911893990126,1.98068342785884,1.9591626318643,1.15662048557257,0.896796041993948,1.78033276663485,0.776110112217047,3.01795190105979,1.89106080167819,1.93546236580344,1.53437012699302,0.834141747676794,2.089512999133,2.05782136407943,0.398068533636986,0,0,0.284163499395593,2.48550927042602,1.40715635988658,2.70093092191522,3.78791576936336,3.34499193970586,2.77680803197281,5.34828072925938,3.75582761959467,5.3712057488898,4.44311594766397,3.11918181750281,2.43206428637567,2.04679982395465,2.63460138349261,2.28150911892632,1.26173969138476,2.46971069710283,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0,1.00534083520108,0.596869416123452,0.779856348476481,0,0.432276099749388,0,0.379335801906163,0,0,0,0.387904974335251,0.280543279561274,1.01178459398812,3.09981310757165,4.39596437955849,2.22114895059241,1.1858105083486,0.333690211432188,0.786235980452812,0.674586337154561,1.21716072833102,2.17059443777175,1.2731292589071,2.87696137450811,1.13494658742525,1.92192989231657,8.62609239164127,0.372140947668503,2.80833905803104,1.76805214562978,1.4351793081753,0.482443521363367,0.554259570499814,0.568474235311454,0.325929952884052,0.678980343100753,1.40814148973101,0.837531287209079,1.42826184531608,2.14647012643579,4.88668946729192,3.10050565508285,7.97273843287435,0.655453258862952,1.20879487306127,2.31438493730419,0,0,0,0.275936746304732,0.642202359951168,0.820481806145422,0,1.00988370881749,4.73262329124385,1.95219372148319,1.07711698866399,0.716906393857656,1.11399337041197,0.849229592366497,0.404810701674894,2.04579100537918,0.395287777946524,2.57057053137446,1.27746076687442,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,1.209294227859,1.1316304785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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54126 | |||
|HGNC= | |||
|MCL_coexpression_id=2476 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9ES28 | |||
|association_with_transcript=-9bp_to_ENSMUST00000033908,ENSMUST00000110909,NM_001113517,uc009kvu.2,uc009kvv.2_5end | |||
|cluster_id=chr8:11728070..11728095,+ | |||
|description=CAGE_peak_5_at_Arhgef7_5end | |||
|id=chr8:11728070..11728095,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.34e-11!23;CL:0000337!7.34e-11!23;CL:0000540!1.35e-10!33;CL:0000047!1.35e-10!33;CL:0000031!1.35e-10!33;CL:0000404!1.35e-10!33;CL:0000393!5.02e-08!39;CL:0000211!5.02e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.75e-12,23;CL:0000337,4.75e-12,23;CL:0000540,7.85e-10,33;CL:0000047,7.85e-10,33;CL:0000031,7.85e-10,33;CL:0000404,7.85e-10,33;CL:0000393,1.23e-07,39;CL:0000211,1.23e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!7.41e-15!114;UBERON:0004111!1.75e-12!122;UBERON:0000468!4.18e-10!333;UBERON:0001017!2.74e-08!73;UBERON:0005743!2.74e-08!73;UBERON:0000922!4.84e-08!328;UBERON:0002020!7.09e-08!34;UBERON:0000073!1.25e-07!75;UBERON:0001016!1.25e-07!75;UBERON:0007100!1.91e-07!18;UBERON:0000948!1.91e-07!18;UBERON:0005498!1.91e-07!18;UBERON:0004140!1.91e-07!18;UBERON:0009881!1.91e-07!18;UBERON:0004141!1.91e-07!18;UBERON:0003084!1.91e-07!18;UBERON:0007005!1.91e-07!18;UBERON:0004139!1.91e-07!18;UBERON:0004291!1.91e-07!18;UBERON:0003914!4.11e-07!47;UBERON:0004121!4.28e-07!102;UBERON:0000924!4.28e-07!102;UBERON:0006601!4.28e-07!102;UBERON:0002346!5.40e-07!71;UBERON:0003075!5.40e-07!71;UBERON:0007284!5.40e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.12e-09,114;UBERON:0007100,1.84e-08,18;UBERON:0000948,1.84e-08,18;UBERON:0005498,1.84e-08,18;UBERON:0004140,1.84e-08,18;UBERON:0009881,1.84e-08,18;UBERON:0004141,1.84e-08,18;UBERON:0003084,1.84e-08,18;UBERON:0007005,1.84e-08,18;UBERON:0004139,1.84e-08,18;UBERON:0004291,1.84e-08,18;UBERON:0004111,3.55e-08,122;UBERON:0003914,1.15e-07,47;UBERON:0002020,6.68e-07,34 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,2.0057340795713,0.515672092277442,4.04632921719196,3.70293685490423,5.70448263155561,0,0,0,0,0,0.299600110518405,0.768436610643109,6.11768712620018,4.86021377994086,6.52007380189284,2.28520787523043,1.54607978666129,7.83941114975706,7.3801012684042,8.27296907949019,1.10115880999389,2.55374676170375,0.921639199537461,5.80299666012853,5.85520919055422,7.29278718779464,1.11673199600552,0.56276261003168,1.5279824777681,3.53554302568401,3.13217697758026,3.54158947068071,0,0.226714680320357,0.289864488701678,2.58127163094416,5.439770669662,1.07940638327563,4.54843492213368,1.79210754838934,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.445326417194474,0.346970653532272,0.304465478312141,0.922461989024234,1.05505848386836,0.352766121407114,0.251333182659351,0.741584903203122,0.289198713839823,0,1.61766849947409,0.883366073841574,0.969750506270444,0,0.878342391034642,0.209446706813455,0,0,0,0,0.599162557619291,1.37250180845588,8.54449594367478,1.21677024134594,2.55715457330331,0.83115217823824,2.27137768294861,1.12023300235348,0.248813941220186,0,0.420883711772948,2.34216797332867,2.06911893990126,1.98068342785884,1.9591626318643,1.15662048557257,0.896796041993948,1.78033276663485,0.776110112217047,3.01795190105979,1.89106080167819,1.93546236580344,1.53437012699302,0.834141747676794,2.089512999133,2.05782136407943,0.398068533636986,0,0,0.284163499395593,2.48550927042602,1.40715635988658,2.70093092191522,3.78791576936336,3.34499193970586,2.77680803197281,5.34828072925938,3.75582761959467,5.3712057488898,4.44311594766397,3.11918181750281,2.43206428637567,2.04679982395465,2.63460138349261,2.28150911892632,1.26173969138476,2.46971069710283,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0,1.00534083520108,0.596869416123452,0.779856348476481,0,0.432276099749388,0,0.379335801906163,0,0,0,0.387904974335251,0.280543279561274,1.01178459398812,3.09981310757165,4.39596437955849,2.22114895059241,1.1858105083486,0.333690211432188,0.786235980452812,0.674586337154561,1.21716072833102,2.17059443777175,1.2731292589071,2.87696137450811,1.13494658742525,1.92192989231657,8.62609239164127,0.372140947668503,2.80833905803104,1.76805214562978,1.4351793081753,0.482443521363367,0.554259570499814,0.568474235311454,0.325929952884052,0.678980343100753,1.40814148973101,0.837531287209079,1.42826184531608,2.14647012643579,4.88668946729192,3.10050565508285,7.97273843287435,0.655453258862952,1.20879487306127,2.31438493730419,0,0,0,0.275936746304732,0.642202359951168,0.820481806145422,0,1.00988370881749,4.73262329124385,1.95219372148319,1.07711698866399,0.716906393857656,1.11399337041197,0.849229592366497,0.404810701674894,2.04579100537918,0.395287777946524,2.57057053137446,1.27746076687442,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,1.209294227859,1.13163047853539,0.885905678642318,3.3817866273832,1.29214146584111,1.45413491791002,1.06949213515416,0.632073515871632,0,0,0,0.540183282093931,0.646793418913773,0.643011105094777,0.532020700926821,0.891844088010353,0.493647061806363,0.913394847343798,0.938686832254841,0.42366414172764,0,0.16488625294148,2.09903754704677,2.47282992205439,0.835606408021955,0.984845398470368,0.291480836629851,0.741701208042039,0,0.206386867963223,0,0.188368457004691,0.546776910884101,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0,0.134864346384821,0.495920734352016,1.04702376793612,0.259229946583586,0,0,0,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0.234714477291508,0.5208175393758,0,0,0.576060012515731,0,0.608175645870493,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0,0,0.15241361331,0,0,0,0.116876902181569,0,0.887943813496259,7.62567781180543,4.19711540910196,1.54551675225752,0,0,0.214368379079066,0,0.564751842617067,0.920650473014354,1.71868654031819,2.23409137046794,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,0.906284817968409,0.51776031175182,2.17953429926771,2.39414924040619,1.53660245178721,2.18796045361465,1.46729213839588,2.38996560985018,1.77797382241292,1.23621034343337,3.20919209591815,0.758091635291392,1.52087579934144,1.88626341386076,1.68554713445788,2.36893063898016,2.12511235135769,2.38146845641537,2.54945517078682,1.92909220463705,2.06042950401653,1.47198920134397,1.71434626192708,1.4198064492747,2.38436189947321,1.74415699958794,1.88218760830661,1.86152137361688,2.0122077016005,1.05227884575137,1.62964936615034,1.12228454331548,1.42362021749009,1.57607171800902,2.45538625901814,1.39443157067369,1.73615949883027,2.49810577937946,1.40358965067245,1.07435527024149,0.765153328275374,0.882365676478062,0.463735671240843 | |||
|short_description=p5@Arhgef7 | |||
}} |
Revision as of 23:31, 5 August 2015
Short description: | p5@Arhgef7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Arhgef7_5end |
Coexpression cluster: | MCL_coexpression_mm9:2476 |
Association with transcript: | -9bp_to_ENSMUST00000033908, ENSMUST00000110909, NM_001113517, uc009kvu.2, uc009kvv.2_5end |
EntrezGene: | 54126 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.75e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.75e-12 | 23 |
neuron | 7.85e-10 | 33 |
neuronal stem cell | 7.85e-10 | 33 |
neuroblast | 7.85e-10 | 33 |
electrically signaling cell | 7.85e-10 | 33 |
electrically responsive cell | 1.23e-07 | 39 |
electrically active cell | 1.23e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
tube | 1.12e-09 | 114 |
primary circulatory organ | 1.84e-08 | 18 |
heart | 1.84e-08 | 18 |
primitive heart tube | 1.84e-08 | 18 |
primary heart field | 1.84e-08 | 18 |
anterior lateral plate mesoderm | 1.84e-08 | 18 |
heart tube | 1.84e-08 | 18 |
heart primordium | 1.84e-08 | 18 |
cardiac mesoderm | 1.84e-08 | 18 |
cardiogenic plate | 1.84e-08 | 18 |
heart rudiment | 1.84e-08 | 18 |
anatomical conduit | 3.55e-08 | 122 |
epithelial tube | 1.15e-07 | 47 |
gray matter | 6.68e-07 | 34 |