FFCP PHASE1:Mm9::chr11:50050504..50050516,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:50050504..50050516,+
|short_description=p1@ENSMUST00000129438,p1@uc007isc.1
|description=CAGE_peak_1_at_ENSMUST00000129438_5end,CAGE_peak_1_at_uc007isc.1_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000129438,uc007isc.1_5end | |||
|cluster_id=chr11:50050504..50050516,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000129438_5end,CAGE_peak_1_at_uc007isc.1_5end | |||
|id=chr11:50050504..50050516,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.19e-10,9;CL:0002251,3.19e-10,9;CL:0002250,5.69e-09,3;CL:0000349,6.79e-09,3;CL:0000351,6.79e-09,3;CL:0000066,2.74e-08,25;CL:0000682,1.54e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.46e-12!43;UBERON:0005409!2.17e-12!59;UBERON:0004119!7.12e-09!130;UBERON:0000925!7.12e-09!130;UBERON:0006595!7.12e-09!130;UBERON:0001007!2.95e-08!128;UBERON:0001555!2.95e-08!128;UBERON:0007026!2.95e-08!128;UBERON:0004921!8.21e-08!126;UBERON:0004185!8.21e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.19e-10,9;UBERON:0004808,3.19e-10,9;UBERON:0001277,3.19e-10,9;UBERON:0000358,6.79e-09,3;UBERON:0000307,6.79e-09,3;UBERON:0007010,6.79e-09,3;UBERON:0000485,3.24e-08,11;UBERON:0001242,7.94e-07,13;UBERON:0001262,7.94e-07,13;UBERON:0004786,7.94e-07,13 | |||
|phase1_expression=0.480446541314382,1.39590163055744,0.454999239389536,0.90739263392049,0.500895729946347,2.51818907867835,3.27057696833736,0.258246646883153,0.84473233291,1.40438715793196,0,0.0797721589953364,0.342401459862411,0,0.666219523631325,0.202475267389826,0,0.315462165358238,0.274228867211478,0,0.850432901510698,0.397163804803541,1.04479915655574,0.639969691173627,0.45881856213434,1.72269589234506,1.7230479846363,1.07735616342945,0.570070258369122,0,0.665191531965914,1.90509202037889,0.61506478758457,0,2.59966457776147,2.99222361645286,2.6542016314108,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0,0,0,0,0,0,0.838913030288682,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,1.73918693221007,0,0.679971333707751,0,0,0.448026887097336,0,0,0,0,0.422530259330042,0,0,0,0,0.760079596425296,0,0.22836775943812,1.55362730188303,0.445326417194474,0,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0.494389935468748,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0.510914110417183,0.479260498023681,0,0,0,0,0.125654352112864,0,0.255715457330331,0.41557608911912,0,0.509196819251581,0.373220911830279,0.758168275301024,0,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.272145996605311,0.2562274405697,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0.51469581422943,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0.205809224758569,0.330418782983798,0.264450566663544,0.639864751605702,0.696710015581316,0.902072229254653,2.42020229548011,0.444756087689741,0.380451252225118,2.37264530772256,1.97638745668813,0.754005626400808,0.596869416123452,1.16978452271472,0.898819408654221,0.864552199498777,0.597423819763102,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0.581857461502877,0.701358198903186,1.51767689098217,1.62371162777562,1.8839847340965,1.1105744752962,0,0.333690211432188,0.589676985339609,0,0.811440485554012,0.72353147925725,0,0.863088412352432,0,0.274561413188081,0,0,0.312037673114561,0,0,0.482443521363367,0.554259570499814,0,0.488894929326078,0.339490171550376,0,0.167506257441816,0.476087281772027,0,0.630540576424764,0.44292937929755,0.318909537314974,0.983179888294428,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0.716906393857656,0.668396022247182,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.162886959353576,1.48473110675282,0,1.45668381692989,0.302323556964751,0.754420319023592,0.295301892880773,1.22974059177571,1.03371317267288,0.727067458955011,0.712994756769443,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0.388076051348264,0.428674070063185,0.886701168211368,0.535106452806212,0.493647061806363,0.608929898229199,0.469343416127421,2.33015277950202,0,0.32977250588296,0,0.361877549568935,0.119372344003136,0,0.874442509889552,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.410082683163076,0.686334519619568,1.01987057996313,1.81936888020755,1.52019971184866,0,0,0.609958401380546,0.540026704109006,0.209088296014469,0.436725127492355,0.134864346384821,0.661227645802687,0.785267825952089,0.518459893167171,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.5208175393758,0.943734099831398,0.483168241652012,0.288030006257865,0.316011120628178,0.202725215290164,0.616265742988964,0.25984164595559,0.358053391334963,0.596044064343795,0.360586348559907,0,0,0,0.100826185136841,0,0.288635524920988,0.233753804363138,0.453460767230423,3.7737612073591,2.15313255862742,2.85403847818933,0.579568782096571,0.187682475451182,1.09890974560359,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0,0.618105171716683,0.64183841918363,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.402048282689293,0,0.115884325944855,0,0.412085900803307,0,0.685738504770831,0,0,0,0.188218760830661,0.169229215783353,0.73171189149109,0,0,0.561142271657738,0,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | |phase1_expression=0.480446541314382,1.39590163055744,0.454999239389536,0.90739263392049,0.500895729946347,2.51818907867835,3.27057696833736,0.258246646883153,0.84473233291,1.40438715793196,0,0.0797721589953364,0.342401459862411,0,0.666219523631325,0.202475267389826,0,0.315462165358238,0.274228867211478,0,0.850432901510698,0.397163804803541,1.04479915655574,0.639969691173627,0.45881856213434,1.72269589234506,1.7230479846363,1.07735616342945,0.570070258369122,0,0.665191531965914,1.90509202037889,0.61506478758457,0,2.59966457776147,2.99222361645286,2.6542016314108,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0,0,0,0,0,0,0.838913030288682,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,1.73918693221007,0,0.679971333707751,0,0,0.448026887097336,0,0,0,0,0.422530259330042,0,0,0,0,0.760079596425296,0,0.22836775943812,1.55362730188303,0.445326417194474,0,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0.494389935468748,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0.510914110417183,0.479260498023681,0,0,0,0,0.125654352112864,0,0.255715457330331,0.41557608911912,0,0.509196819251581,0.373220911830279,0.758168275301024,0,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.272145996605311,0.2562274405697,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0.51469581422943,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0.205809224758569,0.330418782983798,0.264450566663544,0.639864751605702,0.696710015581316,0.902072229254653,2.42020229548011,0.444756087689741,0.380451252225118,2.37264530772256,1.97638745668813,0.754005626400808,0.596869416123452,1.16978452271472,0.898819408654221,0.864552199498777,0.597423819763102,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0.581857461502877,0.701358198903186,1.51767689098217,1.62371162777562,1.8839847340965,1.1105744752962,0,0.333690211432188,0.589676985339609,0,0.811440485554012,0.72353147925725,0,0.863088412352432,0,0.274561413188081,0,0,0.312037673114561,0,0,0.482443521363367,0.554259570499814,0,0.488894929326078,0.339490171550376,0,0.167506257441816,0.476087281772027,0,0.630540576424764,0.44292937929755,0.318909537314974,0.983179888294428,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0.716906393857656,0.668396022247182,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.162886959353576,1.48473110675282,0,1.45668381692989,0.302323556964751,0.754420319023592,0.295301892880773,1.22974059177571,1.03371317267288,0.727067458955011,0.712994756769443,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0.388076051348264,0.428674070063185,0.886701168211368,0.535106452806212,0.493647061806363,0.608929898229199,0.469343416127421,2.33015277950202,0,0.32977250588296,0,0.361877549568935,0.119372344003136,0,0.874442509889552,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.410082683163076,0.686334519619568,1.01987057996313,1.81936888020755,1.52019971184866,0,0,0.609958401380546,0.540026704109006,0.209088296014469,0.436725127492355,0.134864346384821,0.661227645802687,0.785267825952089,0.518459893167171,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.5208175393758,0.943734099831398,0.483168241652012,0.288030006257865,0.316011120628178,0.202725215290164,0.616265742988964,0.25984164595559,0.358053391334963,0.596044064343795,0.360586348559907,0,0,0,0.100826185136841,0,0.288635524920988,0.233753804363138,0.453460767230423,3.7737612073591,2.15313255862742,2.85403847818933,0.579568782096571,0.187682475451182,1.09890974560359,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0,0.618105171716683,0.64183841918363,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.402048282689293,0,0.115884325944855,0,0.412085900803307,0,0.685738504770831,0,0,0,0.188218760830661,0.169229215783353,0.73171189149109,0,0,0.561142271657738,0,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | ||
|short_description=p1@ENSMUST00000129438,p1@uc007isc.1 | |||
}} | }} |
Latest revision as of 00:13, 6 August 2015
Short description: | p1@ENSMUST00000129438, p1@uc007isc.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000129438_5end, CAGE_peak_1_at_uc007isc.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000129438, uc007isc.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.19e-10 | 9 |
epithelial cell of alimentary canal | 3.19e-10 | 9 |
intestinal crypt stem cell | 5.69e-09 | 3 |
extraembryonic cell | 6.79e-09 | 3 |
trophoblast cell | 6.79e-09 | 3 |
epithelial cell | 2.74e-08 | 25 |
M cell of gut | 1.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.19e-10 | 9 |
gastrointestinal system epithelium | 3.19e-10 | 9 |
intestinal epithelium | 3.19e-10 | 9 |
blastocyst | 6.79e-09 | 3 |
blastula | 6.79e-09 | 3 |
cleaving embryo | 6.79e-09 | 3 |
simple columnar epithelium | 3.24e-08 | 11 |
intestinal mucosa | 7.94e-07 | 13 |
wall of intestine | 7.94e-07 | 13 |
gastrointestinal system mucosa | 7.94e-07 | 13 |