FFCP PHASE1:Mm9::chr3:129236571..129236575,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=259 | |MCL_coexpression_id=259 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:129236571..129236575,+ | |||
|description=CAGE_peak_at_chr3:129236571..129236575,+ | |description=CAGE_peak_at_chr3:129236571..129236575,+ | ||
|id=chr3:129236571..129236575,+ | |id=chr3:129236571..129236575,+ | ||
|ontology_enrichment_celltype=CL:0000893!3.07e-08!6;CL:0002489!3.07e-08!6;CL:0000898!3.07e-08!6;CL:0000809!3.07e-08!6;CL:0000810!3.07e-08!6;CL:0000895!3.07e-08!6;CL:0000808!3.07e-08!6;CL:0000894!3.07e-08!6;CL:0000806!3.07e-08!6;CL:0000807!3.07e-08!6;CL:0000805!3.07e-08!6;CL:0002425!3.07e-08!6;CL:0002436!3.07e-08!6;CL:0002427!3.07e-08!6;CL:0002428!3.07e-08!6;CL:0002429!3.07e-08!6;CL:0002433!3.07e-08!6;CL:0002431!3.07e-08!6;CL:0002432!3.07e-08!6 | |ontology_enrichment_celltype=CL:0000893!3.07e-08!6;CL:0002489!3.07e-08!6;CL:0000898!3.07e-08!6;CL:0000809!3.07e-08!6;CL:0000810!3.07e-08!6;CL:0000895!3.07e-08!6;CL:0000808!3.07e-08!6;CL:0000894!3.07e-08!6;CL:0000806!3.07e-08!6;CL:0000807!3.07e-08!6;CL:0000805!3.07e-08!6;CL:0002425!3.07e-08!6;CL:0002436!3.07e-08!6;CL:0002427!3.07e-08!6;CL:0002428!3.07e-08!6;CL:0002429!3.07e-08!6;CL:0002433!3.07e-08!6;CL:0002431!3.07e-08!6;CL:0002432!3.07e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.06e-23,1;CL:0002078,3.06e-23,1;CL:0000115,3.06e-23,1;CL:0002262,3.06e-23,1;CL:1000398,3.06e-23,1;CL:0000057,5.07e-23,1;CL:0000632,5.07e-23,1;CL:0000215,1.13e-08,3;CL:0000151,1.34e-08,3;CL:0000499,1.34e-08,3;CL:0000327,1.34e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.06e-23,1;UBERON:0001281,3.06e-23,1;UBERON:0000353,3.06e-23,1;UBERON:0003497,3.06e-23,1;UBERON:0003909,3.06e-23,1;UBERON:0003928,3.06e-23,1;UBERON:0003835,3.06e-23,1;UBERON:0003513,3.06e-23,1;UBERON:0001280,3.06e-23,1;UBERON:0004647,3.06e-23,1;UBERON:0002294,3.06e-23,1;UBERON:0001173,3.06e-23,1;UBERON:0004912,3.06e-23,1;UBERON:0005171,3.06e-23,1;UBERON:0000058,1.55e-13,7;UBERON:0001301,1.59e-08,3;UBERON:0006555,1.59e-08,3;UBERON:0005103,1.59e-08,3;UBERON:0000083,1.59e-08,3;UBERON:0009201,1.59e-08,3;UBERON:0004819,1.59e-08,3;UBERON:0006553,1.59e-08,3;UBERON:0003074,1.59e-08,3;UBERON:0003060,1.59e-08,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,1.12630977721333,0.468129052643987,0.34243593645101,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,4.05810284182349,3.44169550792555,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,1.26361379216837,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0.295379054349154,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,1.12630977721333,0.468129052643987,0.34243593645101,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,4.05810284182349,3.44169550792555,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,1.26361379216837,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0.295379054349154,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:129236571..129236575,+ | |short_description=p@chr3:129236571..129236575,+ | ||
}} | }} |
Latest revision as of 00:39, 6 August 2015
Short description: | p@chr3:129236571..129236575, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:129236571..129236575, + |
Coexpression cluster: | MCL_coexpression_mm9:259 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.06e-23 | 1 |
meso-epithelial cell | 3.06e-23 | 1 |
endothelial cell | 3.06e-23 | 1 |
endothelial cell of sinusoid | 3.06e-23 | 1 |
endothelial cell of hepatic sinusoid | 3.06e-23 | 1 |
fibroblast | 5.07e-23 | 1 |
hepatic stellate cell | 5.07e-23 | 1 |
barrier cell | 1.13e-08 | 3 |
secretory cell | 1.34e-08 | 3 |
stromal cell | 1.34e-08 | 3 |
extracellular matrix secreting cell | 1.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.06e-23 | 1 |
hepatic sinusoid | 3.06e-23 | 1 |
parenchyma | 3.06e-23 | 1 |
abdomen blood vessel | 3.06e-23 | 1 |
sinusoid | 3.06e-23 | 1 |
digestive system duct | 3.06e-23 | 1 |
abdominal segment blood vessel | 3.06e-23 | 1 |
trunk blood vessel | 3.06e-23 | 1 |
liver parenchyma | 3.06e-23 | 1 |
liver lobule | 3.06e-23 | 1 |
biliary system | 3.06e-23 | 1 |
biliary tree | 3.06e-23 | 1 |
biliary bud | 3.06e-23 | 1 |
hepatic duct | 3.06e-23 | 1 |
duct | 1.55e-13 | 7 |
epididymis | 1.59e-08 | 3 |
excretory tube | 1.59e-08 | 3 |
mesonephric epithelium | 1.59e-08 | 3 |
mesonephric tubule | 1.59e-08 | 3 |
nephric duct | 1.59e-08 | 3 |
kidney epithelium | 1.59e-08 | 3 |
renal duct | 1.59e-08 | 3 |
mesonephric duct | 1.59e-08 | 3 |
pronephric duct | 1.59e-08 | 3 |