FFCP PHASE1:Mm9::chr11:51689587..51689612,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=889 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:51689587..51689612,+ | |||
|description=CAGE_peak_at_chr11:51689587..51689612,+ | |description=CAGE_peak_at_chr11:51689587..51689612,+ | ||
|id=chr11:51689587..51689612,+ | |id=chr11:51689587..51689612,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.93e-16!9;CL:0002251!4.93e-16!9;CL:0000066!1.09e-12!25;CL:0000239!4.56e-11!6;CL:0000677!4.56e-11!6;CL:0000212!4.56e-11!6;CL:0000584!4.56e-11!6;CL:0000223!2.22e-10!20;CL:0000075!2.57e-09!7;CL:0002076!1.17e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.45e-27,9;CL:0002251,3.45e-27,9;CL:0000066,7.39e-21,25;CL:0000239,2.23e-18,6;CL:0000677,2.23e-18,6;CL:0000584,2.23e-18,6;CL:0000223,2.63e-16,20;CL:0000075,1.19e-15,7;CL:0002076,1.28e-15,15;CL:0002250,2.24e-10,3;CL:0000682,1.48e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.29e-26!43;UBERON:0000344!9.41e-25!15;UBERON:0005409!2.39e-22!59;UBERON:0001242!6.95e-22!13;UBERON:0000060!6.95e-22!13;UBERON:0001262!6.95e-22!13;UBERON:0004786!6.95e-22!13;UBERON:0003350!4.93e-16!9;UBERON:0004808!4.93e-16!9;UBERON:0001277!4.93e-16!9;UBERON:0004923!1.02e-13!24;UBERON:0000485!1.14e-12!11;UBERON:0001007!9.39e-12!128;UBERON:0001555!9.39e-12!128;UBERON:0007026!9.39e-12!128;UBERON:0004119!2.11e-11!130;UBERON:0000925!2.11e-11!130;UBERON:0006595!2.11e-11!130;UBERON:0004921!2.67e-10!126;UBERON:0004185!2.67e-10!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.79e-49,31;UBERON:0000344,1.06e-42,15;UBERON:0001242,1.36e-37,13;UBERON:0001262,1.36e-37,13;UBERON:0004786,1.36e-37,13;UBERON:0005409,1.02e-30,47;UBERON:0003350,3.45e-27,9;UBERON:0004808,3.45e-27,9;UBERON:0001277,3.45e-27,9;UBERON:0004923,2.00e-25,24;UBERON:0000485,6.24e-22,11;UBERON:0001007,5.53e-14,116;UBERON:0001555,5.53e-14,116;UBERON:0007026,5.53e-14,116;UBERON:0004119,1.19e-13,118;UBERON:0000925,1.19e-13,118;UBERON:0006595,1.19e-13,118;UBERON:0002108,5.72e-12,4;UBERON:0004921,8.41e-12,114;UBERON:0000331,1.48e-09,3;UBERON:0002116,1.48e-09,3;UBERON:0001204,1.48e-09,3;UBERON:0001168,1.48e-09,3 | |||
|phase1_expression=0,8.37540978334467,8.18998630901165,15.4256747766483,18.5331420080148,7.21880869221126,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.75291137280604,5.7423196411502,6.46142994238612,5.38678081714723,5.13063232532209,4.28451220591882,9.3126814475228,0,0.61506478758457,0,25.9966457776147,14.2961795008303,19.1919194886627,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,1.07940638327563,0,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,1.65209391491899,2.3800550999719,0,0,0,0.201683524623343,0.667134131534611,0.760902504450237,0.949058123089023,1.15289268306808,1.25667604400135,1.98956472041151,1.55971269695296,4.49409704327111,3.02593269824572,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0.523511883968059,0.388844919875379,0,0,0,0,0.388902376688095,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,8.37540978334467,8.18998630901165,15.4256747766483,18.5331420080148,7.21880869221126,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.75291137280604,5.7423196411502,6.46142994238612,5.38678081714723,5.13063232532209,4.28451220591882,9.3126814475228,0,0.61506478758457,0,25.9966457776147,14.2961795008303,19.1919194886627,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,1.07940638327563,0,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,1.65209391491899,2.3800550999719,0,0,0,0.201683524623343,0.667134131534611,0.760902504450237,0.949058123089023,1.15289268306808,1.25667604400135,1.98956472041151,1.55971269695296,4.49409704327111,3.02593269824572,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0.523511883968059,0.388844919875379,0,0,0,0,0.388902376688095,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr11:51689587..51689612,+ | |short_description=p@chr11:51689587..51689612,+ | ||
}} | }} |
Latest revision as of 00:53, 6 August 2015
Short description: | p@chr11:51689587..51689612, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:51689587..51689612, + |
Coexpression cluster: | MCL_coexpression_mm9:889 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.45e-27 | 9 |
epithelial cell of alimentary canal | 3.45e-27 | 9 |
epithelial cell | 7.39e-21 | 25 |
brush border epithelial cell | 2.23e-18 | 6 |
gut absorptive cell | 2.23e-18 | 6 |
enterocyte | 2.23e-18 | 6 |
endodermal cell | 2.63e-16 | 20 |
columnar/cuboidal epithelial cell | 1.19e-15 | 7 |
endo-epithelial cell | 1.28e-15 | 15 |
intestinal crypt stem cell | 2.24e-10 | 3 |
M cell of gut | 1.48e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.79e-49 | 31 |
mucosa | 1.06e-42 | 15 |
intestinal mucosa | 1.36e-37 | 13 |
wall of intestine | 1.36e-37 | 13 |
gastrointestinal system mucosa | 1.36e-37 | 13 |
gastrointestinal system | 1.02e-30 | 47 |
epithelium of mucosa | 3.45e-27 | 9 |
gastrointestinal system epithelium | 3.45e-27 | 9 |
intestinal epithelium | 3.45e-27 | 9 |
organ component layer | 2.00e-25 | 24 |
simple columnar epithelium | 6.24e-22 | 11 |
digestive system | 5.53e-14 | 116 |
digestive tract | 5.53e-14 | 116 |
primitive gut | 5.53e-14 | 116 |
endoderm-derived structure | 1.19e-13 | 118 |
endoderm | 1.19e-13 | 118 |
presumptive endoderm | 1.19e-13 | 118 |
small intestine | 5.72e-12 | 4 |
subdivision of digestive tract | 8.41e-12 | 114 |
ileal mucosa | 1.48e-09 | 3 |
ileum | 1.48e-09 | 3 |
mucosa of small intestine | 1.48e-09 | 3 |
wall of small intestine | 1.48e-09 | 3 |