FFCP PHASE1:Mm9::chr3:132292886..132292899,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:132292886..132292899,+|id=chr3:132292886..132292899,+|ontology_enrichment_celltype=CL:0000239!1.34e-13!6;CL:0000677!1.34e-13!6;CL:0000212!1.34e-13!6;CL:0000584!1.34e-13!6;CL:0000075!1.58e-11!7;CL:0002563!1.95e-11!9;CL:0002251!1.95e-11!9;CL:0000066!9.91e-09!25;CL:0000473!4.16e-08!3;CL:0000627!4.16e-08!3;CL:0000682!4.16e-08!3|ontology_enrichment_celltype_v019_2=CL:0000239,1.36e-26,6;CL:0000677,1.36e-26,6;CL:0000584,1.36e-26,6;CL:0000075,9.58e-23,7;CL:0002563,1.32e-17,9;CL:0002251,1.32e-17,9;CL:0000682,3.66e-15,3;CL:0000066,1.07e-13,25;CL:0002076,2.20e-10,15;CL:0000223,1.15e-07,20;CL:0000473,9.47e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.04e-23!43;UBERON:0000344!1.03e-22!15;UBERON:0001242!1.00e-18!13;UBERON:0000060!1.00e-18!13;UBERON:0001262!1.00e-18!13;UBERON:0004786!1.00e-18!13;UBERON:0005409!2.65e-18!59;UBERON:0004923!5.79e-13!24;UBERON:0001007!3.79e-12!128;UBERON:0001555!3.79e-12!128;UBERON:0007026!3.79e-12!128;UBERON:0004119!7.80e-12!130;UBERON:0000925!7.80e-12!130;UBERON:0006595!7.80e-12!130;UBERON:0003350!1.95e-11!9;UBERON:0004808!1.95e-11!9;UBERON:0001277!1.95e-11!9;UBERON:0004921!2.33e-10!126;UBERON:0004185!2.33e-10!126;UBERON:0000485!3.91e-09!11;UBERON:0000331!2.51e-07!3;UBERON:0002116!2.51e-07!3;UBERON:0001204!2.51e-07!3;UBERON:0001168!2.51e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.49e-29,31;UBERON:0000344,1.45e-28,15;UBERON:0001242,3.34e-21,13;UBERON:0001262,3.34e-21,13;UBERON:0004786,3.34e-21,13;UBERON:0005409,1.06e-18,47;UBERON:0003350,1.32e-17,9;UBERON:0004808,1.32e-17,9;UBERON:0001277,1.32e-17,9;UBERON:0004923,2.60e-17,24;UBERON:0000485,2.51e-14,11;UBERON:0002108,1.37e-10,4;UBERON:0001962,5.16e-10,2;UBERON:0001961,5.16e-10,2;UBERON:0001744,5.16e-10,2;UBERON:0001007,2.32e-08,116;UBERON:0001555,2.32e-08,116;UBERON:0007026,2.32e-08,116;UBERON:0004119,3.59e-08,118;UBERON:0000925,3.59e-08,118;UBERON:0006595,3.59e-08,118;UBERON:0000331,5.99e-07,3;UBERON:0002116,5.99e-07,3;UBERON:0001204,5.99e-07,3;UBERON:0002465,5.99e-07,3;UBERON:0001168,5.99e-07,3|phase1_expression=0,12.9120900826564,9.55498402718026,1.51232105653415,1.50268718983904,5.54001597309236,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,5.27641346454491,15.5042630311055,11.1998119001359,14.4365725899546,0.760093677825496,2.52030129759931,6.20845429834853,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.528901133327089,0,0,0.257734922644187,0,0,0.570676878337677,1.89811624617805,3.62337700392824,1.00534083520108,0.994782360205754,0.779856348476481,0,2.37751854862164,3.38540164532424,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:132292886..132292899,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:132292886..132292899,+ | |||
|description=CAGE_peak_at_chr3:132292886..132292899,+ | |||
|id=chr3:132292886..132292899,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.34e-13!6;CL:0000677!1.34e-13!6;CL:0000212!1.34e-13!6;CL:0000584!1.34e-13!6;CL:0000075!1.58e-11!7;CL:0002563!1.95e-11!9;CL:0002251!1.95e-11!9;CL:0000066!9.91e-09!25;CL:0000473!4.16e-08!3;CL:0000627!4.16e-08!3;CL:0000682!4.16e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.36e-26,6;CL:0000677,1.36e-26,6;CL:0000584,1.36e-26,6;CL:0000075,9.58e-23,7;CL:0002563,1.32e-17,9;CL:0002251,1.32e-17,9;CL:0000682,3.66e-15,3;CL:0000066,1.07e-13,25;CL:0002076,2.20e-10,15;CL:0000223,1.15e-07,20;CL:0000473,9.47e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.04e-23!43;UBERON:0000344!1.03e-22!15;UBERON:0001242!1.00e-18!13;UBERON:0000060!1.00e-18!13;UBERON:0001262!1.00e-18!13;UBERON:0004786!1.00e-18!13;UBERON:0005409!2.65e-18!59;UBERON:0004923!5.79e-13!24;UBERON:0001007!3.79e-12!128;UBERON:0001555!3.79e-12!128;UBERON:0007026!3.79e-12!128;UBERON:0004119!7.80e-12!130;UBERON:0000925!7.80e-12!130;UBERON:0006595!7.80e-12!130;UBERON:0003350!1.95e-11!9;UBERON:0004808!1.95e-11!9;UBERON:0001277!1.95e-11!9;UBERON:0004921!2.33e-10!126;UBERON:0004185!2.33e-10!126;UBERON:0000485!3.91e-09!11;UBERON:0000331!2.51e-07!3;UBERON:0002116!2.51e-07!3;UBERON:0001204!2.51e-07!3;UBERON:0001168!2.51e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.49e-29,31;UBERON:0000344,1.45e-28,15;UBERON:0001242,3.34e-21,13;UBERON:0001262,3.34e-21,13;UBERON:0004786,3.34e-21,13;UBERON:0005409,1.06e-18,47;UBERON:0003350,1.32e-17,9;UBERON:0004808,1.32e-17,9;UBERON:0001277,1.32e-17,9;UBERON:0004923,2.60e-17,24;UBERON:0000485,2.51e-14,11;UBERON:0002108,1.37e-10,4;UBERON:0001962,5.16e-10,2;UBERON:0001961,5.16e-10,2;UBERON:0001744,5.16e-10,2;UBERON:0001007,2.32e-08,116;UBERON:0001555,2.32e-08,116;UBERON:0007026,2.32e-08,116;UBERON:0004119,3.59e-08,118;UBERON:0000925,3.59e-08,118;UBERON:0006595,3.59e-08,118;UBERON:0000331,5.99e-07,3;UBERON:0002116,5.99e-07,3;UBERON:0001204,5.99e-07,3;UBERON:0002465,5.99e-07,3;UBERON:0001168,5.99e-07,3 | |||
|phase1_expression=0,12.9120900826564,9.55498402718026,1.51232105653415,1.50268718983904,5.54001597309236,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,5.27641346454491,15.5042630311055,11.1998119001359,14.4365725899546,0.760093677825496,2.52030129759931,6.20845429834853,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.528901133327089,0,0,0.257734922644187,0,0,0.570676878337677,1.89811624617805,3.62337700392824,1.00534083520108,0.994782360205754,0.779856348476481,0,2.37751854862164,3.38540164532424,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:132292886..132292899,+ | |||
}} |
Latest revision as of 01:34, 6 August 2015
Short description: | p@chr3:132292886..132292899, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:132292886..132292899, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.36e-26 | 6 |
gut absorptive cell | 1.36e-26 | 6 |
enterocyte | 1.36e-26 | 6 |
columnar/cuboidal epithelial cell | 9.58e-23 | 7 |
intestinal epithelial cell | 1.32e-17 | 9 |
epithelial cell of alimentary canal | 1.32e-17 | 9 |
M cell of gut | 3.66e-15 | 3 |
epithelial cell | 1.07e-13 | 25 |
endo-epithelial cell | 2.20e-10 | 15 |
endodermal cell | 1.15e-07 | 20 |
defensive cell | 9.47e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.49e-29 | 31 |
mucosa | 1.45e-28 | 15 |
intestinal mucosa | 3.34e-21 | 13 |
wall of intestine | 3.34e-21 | 13 |
gastrointestinal system mucosa | 3.34e-21 | 13 |
gastrointestinal system | 1.06e-18 | 47 |
epithelium of mucosa | 1.32e-17 | 9 |
gastrointestinal system epithelium | 1.32e-17 | 9 |
intestinal epithelium | 1.32e-17 | 9 |
organ component layer | 2.60e-17 | 24 |
simple columnar epithelium | 2.51e-14 | 11 |
small intestine | 1.37e-10 | 4 |
gut-associated lymphoid tissue | 5.16e-10 | 2 |
mucosa-associated lymphoid tissue | 5.16e-10 | 2 |
lymphoid tissue | 5.16e-10 | 2 |
digestive system | 2.32e-08 | 116 |
digestive tract | 2.32e-08 | 116 |
primitive gut | 2.32e-08 | 116 |
endoderm-derived structure | 3.59e-08 | 118 |
endoderm | 3.59e-08 | 118 |
presumptive endoderm | 3.59e-08 | 118 |
ileal mucosa | 5.99e-07 | 3 |
ileum | 5.99e-07 | 3 |
mucosa of small intestine | 5.99e-07 | 3 |
lymphoid system | 5.99e-07 | 3 |
wall of small intestine | 5.99e-07 | 3 |