FFCP PHASE1:Mm9::chr3:144687544..144687560,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=274|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:144687544..144687560,-|id=chr3:144687544..144687560,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.83e-18!43;UBERON:0005409!4.10e-15!59;UBERON:0000344!1.47e-12!15;UBERON:0001007!1.24e-09!128;UBERON:0001555!1.24e-09!128;UBERON:0007026!1.24e-09!128;UBERON:0004119!2.21e-09!130;UBERON:0000925!2.21e-09!130;UBERON:0006595!2.21e-09!130;UBERON:0001242!6.44e-09!13;UBERON:0000060!6.44e-09!13;UBERON:0001262!6.44e-09!13;UBERON:0004786!6.44e-09!13;UBERON:0000331!1.32e-08!3;UBERON:0002116!1.32e-08!3;UBERON:0001204!1.32e-08!3;UBERON:0001168!1.32e-08!3;UBERON:0004921!5.83e-08!126;UBERON:0004185!5.83e-08!126;UBERON:0004923!3.61e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.21e-21,31;UBERON:0000344,1.13e-20,15;UBERON:0002108,1.37e-20,4;UBERON:0005409,3.81e-16,47;UBERON:0000331,8.21e-16,3;UBERON:0002116,8.21e-16,3;UBERON:0001204,8.21e-16,3;UBERON:0001168,8.21e-16,3;UBERON:0001242,1.03e-13,13;UBERON:0001262,1.03e-13,13;UBERON:0004786,1.03e-13,13;UBERON:0004923,1.43e-12,24;UBERON:0001962,6.17e-11,2;UBERON:0001961,6.17e-11,2;UBERON:0001744,6.17e-11,2;UBERON:0001007,9.23e-09,116;UBERON:0001555,9.23e-09,116;UBERON:0007026,9.23e-09,116;UBERON:0004119,1.43e-08,118;UBERON:0000925,1.43e-08,118;UBERON:0006595,1.43e-08,118;UBERON:0002465,1.42e-07,3|phase1_expression=0,0,0.454999239389536,0,0,4.19698179779725,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.23989391910769,3.21172993494038,0,0.430761996159075,1.50829862880122,8.36103045608045,2.77233142735924,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0,0,0,0,0,0.22237804384487,0.570676878337677,2.84717436926707,0.823494773620054,1.00534083520108,0.397912944082302,0.38992817423824,0.898819408654221,4.97117514711797,4.38110801159608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.44292937929755,0.637819074629948,0,1.03610989119537,0.867894351489069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28206136987086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:144687544..144687560,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=274 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:144687544..144687560,- | |||
|description=CAGE_peak_at_chr3:144687544..144687560,- | |||
|id=chr3:144687544..144687560,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.83e-18!43;UBERON:0005409!4.10e-15!59;UBERON:0000344!1.47e-12!15;UBERON:0001007!1.24e-09!128;UBERON:0001555!1.24e-09!128;UBERON:0007026!1.24e-09!128;UBERON:0004119!2.21e-09!130;UBERON:0000925!2.21e-09!130;UBERON:0006595!2.21e-09!130;UBERON:0001242!6.44e-09!13;UBERON:0000060!6.44e-09!13;UBERON:0001262!6.44e-09!13;UBERON:0004786!6.44e-09!13;UBERON:0000331!1.32e-08!3;UBERON:0002116!1.32e-08!3;UBERON:0001204!1.32e-08!3;UBERON:0001168!1.32e-08!3;UBERON:0004921!5.83e-08!126;UBERON:0004185!5.83e-08!126;UBERON:0004923!3.61e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.21e-21,31;UBERON:0000344,1.13e-20,15;UBERON:0002108,1.37e-20,4;UBERON:0005409,3.81e-16,47;UBERON:0000331,8.21e-16,3;UBERON:0002116,8.21e-16,3;UBERON:0001204,8.21e-16,3;UBERON:0001168,8.21e-16,3;UBERON:0001242,1.03e-13,13;UBERON:0001262,1.03e-13,13;UBERON:0004786,1.03e-13,13;UBERON:0004923,1.43e-12,24;UBERON:0001962,6.17e-11,2;UBERON:0001961,6.17e-11,2;UBERON:0001744,6.17e-11,2;UBERON:0001007,9.23e-09,116;UBERON:0001555,9.23e-09,116;UBERON:0007026,9.23e-09,116;UBERON:0004119,1.43e-08,118;UBERON:0000925,1.43e-08,118;UBERON:0006595,1.43e-08,118;UBERON:0002465,1.42e-07,3 | |||
|phase1_expression=0,0,0.454999239389536,0,0,4.19698179779725,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.23989391910769,3.21172993494038,0,0.430761996159075,1.50829862880122,8.36103045608045,2.77233142735924,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0,0,0,0,0,0.22237804384487,0.570676878337677,2.84717436926707,0.823494773620054,1.00534083520108,0.397912944082302,0.38992817423824,0.898819408654221,4.97117514711797,4.38110801159608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.44292937929755,0.637819074629948,0,1.03610989119537,0.867894351489069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28206136987086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:144687544..144687560,- | |||
}} |
Latest revision as of 04:29, 6 August 2015
Short description: | p@chr3:144687544..144687560, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:144687544..144687560, - |
Coexpression cluster: | MCL_coexpression_mm9:274 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.21e-21 | 31 |
mucosa | 1.13e-20 | 15 |
small intestine | 1.37e-20 | 4 |
gastrointestinal system | 3.81e-16 | 47 |
ileal mucosa | 8.21e-16 | 3 |
ileum | 8.21e-16 | 3 |
mucosa of small intestine | 8.21e-16 | 3 |
wall of small intestine | 8.21e-16 | 3 |
intestinal mucosa | 1.03e-13 | 13 |
wall of intestine | 1.03e-13 | 13 |
gastrointestinal system mucosa | 1.03e-13 | 13 |
organ component layer | 1.43e-12 | 24 |
gut-associated lymphoid tissue | 6.17e-11 | 2 |
mucosa-associated lymphoid tissue | 6.17e-11 | 2 |
lymphoid tissue | 6.17e-11 | 2 |
digestive system | 9.23e-09 | 116 |
digestive tract | 9.23e-09 | 116 |
primitive gut | 9.23e-09 | 116 |
endoderm-derived structure | 1.43e-08 | 118 |
endoderm | 1.43e-08 | 118 |
presumptive endoderm | 1.43e-08 | 118 |
lymphoid system | 1.42e-07 | 3 |