FFCP PHASE1:Mm9::chr3:145625636..145625642,+: Difference between revisions
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|id=chr3:145625636..145625642,+
|short_description=p@chr3:145625636..145625642,+
|description=CAGE_peak_at_chr3:145625636..145625642,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:145625636..145625642,+ | |||
|description=CAGE_peak_at_chr3:145625636..145625642,+ | |||
|id=chr3:145625636..145625642,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.09e-10!9;CL:0002251!1.09e-10!9;CL:0000066!5.69e-09!25;CL:0000075!2.38e-07!7;CL:0000239!5.95e-07!6;CL:0000677!5.95e-07!6;CL:0000212!5.95e-07!6;CL:0000584!5.95e-07!6;CL:0002076!7.57e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.56e-38,3;CL:0000213,2.06e-13,1;CL:0002078,2.06e-13,1;CL:0000115,2.06e-13,1;CL:0002262,2.06e-13,1;CL:1000398,2.06e-13,1;CL:0002563,2.10e-13,9;CL:0002251,2.10e-13,9;CL:0000066,8.12e-13,25;CL:0000223,1.57e-10,20;CL:0002076,2.57e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.14e-13!15;UBERON:0000160!1.01e-11!43;UBERON:0001242!1.51e-11!13;UBERON:0000060!1.51e-11!13;UBERON:0001262!1.51e-11!13;UBERON:0004786!1.51e-11!13;UBERON:0000485!1.68e-11!11;UBERON:0003350!1.09e-10!9;UBERON:0004808!1.09e-10!9;UBERON:0001277!1.09e-10!9;UBERON:0005409!2.03e-10!59;UBERON:0004923!1.17e-09!24;UBERON:0004119!8.10e-08!130;UBERON:0000925!8.10e-08!130;UBERON:0006595!8.10e-08!130;UBERON:0001007!1.87e-07!128;UBERON:0001555!1.87e-07!128;UBERON:0007026!1.87e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.06e-13,1;UBERON:0001281,2.06e-13,1;UBERON:0000353,2.06e-13,1;UBERON:0003497,2.06e-13,1;UBERON:0003909,2.06e-13,1;UBERON:0003928,2.06e-13,1;UBERON:0003835,2.06e-13,1;UBERON:0003513,2.06e-13,1;UBERON:0001280,2.06e-13,1;UBERON:0004647,2.06e-13,1;UBERON:0002294,2.06e-13,1;UBERON:0001173,2.06e-13,1;UBERON:0004912,2.06e-13,1;UBERON:0005171,2.06e-13,1;UBERON:0003350,2.10e-13,9;UBERON:0004808,2.10e-13,9;UBERON:0001277,2.10e-13,9;UBERON:0000485,4.24e-11,11;UBERON:0000160,1.69e-10,31;UBERON:0001242,1.70e-09,13;UBERON:0001262,1.70e-09,13;UBERON:0004786,1.70e-09,13;UBERON:0000344,2.57e-08,15;UBERON:0001155,1.76e-07,2;UBERON:0000059,1.76e-07,2;UBERON:0005409,5.25e-07,47 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,0.45881856213434,0.57423196411502,0.430761996159075,1.50829862880122,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,8.37669697278696,3.49092755252834,11.4334839506927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0.252722758433675,0,0.260240885925407,0,0,0,0,0,0,0,0,0.378212160335639,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,3.96675849995316,0.426576501070468,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0.193952487167626,0.140271639780637,0.379419222745544,0.295220295959204,0,0.740382983530803,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.670025029767263,0.714130922658041,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0.63549621259146,0,0.65954501176592,0.161464426695906,0.72375509913787,0.596861720015682,0.820704498725306,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.324016022465404,0,0.436725127492355,0.269728692769641,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503653849092235,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0,0,0,0.441182838239031,0 | |phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,0.45881856213434,0.57423196411502,0.430761996159075,1.50829862880122,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,8.37669697278696,3.49092755252834,11.4334839506927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0.252722758433675,0,0.260240885925407,0,0,0,0,0,0,0,0,0.378212160335639,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,3.96675849995316,0.426576501070468,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0.193952487167626,0.140271639780637,0.379419222745544,0.295220295959204,0,0.740382983530803,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.670025029767263,0.714130922658041,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0.63549621259146,0,0.65954501176592,0.161464426695906,0.72375509913787,0.596861720015682,0.820704498725306,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.324016022465404,0,0.436725127492355,0.269728692769641,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503653849092235,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0,0,0,0.441182838239031,0 | ||
|short_description=p@chr3:145625636..145625642,+ | |||
}} | }} |
Latest revision as of 04:45, 6 August 2015
Short description: | p@chr3:145625636..145625642, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:145625636..145625642, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.56e-38 | 3 |
lining cell | 2.06e-13 | 1 |
meso-epithelial cell | 2.06e-13 | 1 |
endothelial cell | 2.06e-13 | 1 |
endothelial cell of sinusoid | 2.06e-13 | 1 |
endothelial cell of hepatic sinusoid | 2.06e-13 | 1 |
intestinal epithelial cell | 2.10e-13 | 9 |
epithelial cell of alimentary canal | 2.10e-13 | 9 |
epithelial cell | 8.12e-13 | 25 |
endodermal cell | 1.57e-10 | 20 |
endo-epithelial cell | 2.57e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.06e-13 | 1 |
hepatic sinusoid | 2.06e-13 | 1 |
parenchyma | 2.06e-13 | 1 |
abdomen blood vessel | 2.06e-13 | 1 |
sinusoid | 2.06e-13 | 1 |
digestive system duct | 2.06e-13 | 1 |
abdominal segment blood vessel | 2.06e-13 | 1 |
trunk blood vessel | 2.06e-13 | 1 |
liver parenchyma | 2.06e-13 | 1 |
liver lobule | 2.06e-13 | 1 |
biliary system | 2.06e-13 | 1 |
biliary tree | 2.06e-13 | 1 |
biliary bud | 2.06e-13 | 1 |
hepatic duct | 2.06e-13 | 1 |
epithelium of mucosa | 2.10e-13 | 9 |
gastrointestinal system epithelium | 2.10e-13 | 9 |
intestinal epithelium | 2.10e-13 | 9 |
simple columnar epithelium | 4.24e-11 | 11 |
intestine | 1.69e-10 | 31 |
intestinal mucosa | 1.70e-09 | 13 |
wall of intestine | 1.70e-09 | 13 |
gastrointestinal system mucosa | 1.70e-09 | 13 |
mucosa | 2.57e-08 | 15 |
colon | 1.76e-07 | 2 |
large intestine | 1.76e-07 | 2 |
gastrointestinal system | 5.25e-07 | 47 |