FFCP PHASE1:Mm9::chr8:3221171..3221187,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=451 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:3221171..3221187,+ | |||
|description=CAGE_peak_at_chr8:3221171..3221187,+ | |description=CAGE_peak_at_chr8:3221171..3221187,+ | ||
|id=chr8:3221171..3221187,+ | |id=chr8:3221171..3221187,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.63e-10!9;CL:0002251!1.63e-10!9;CL:0000107!9.70e-07!9 | |ontology_enrichment_celltype=CL:0002563!1.63e-10!9;CL:0002251!1.63e-10!9;CL:0000107!9.70e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.06e-23,1;CL:0002078,3.06e-23,1;CL:0000115,3.06e-23,1;CL:0002262,3.06e-23,1;CL:1000398,3.06e-23,1;CL:0002563,1.96e-22,9;CL:0002251,1.96e-22,9;CL:0000223,3.40e-18,20;CL:0000239,1.87e-15,6;CL:0000677,1.87e-15,6;CL:0000584,1.87e-15,6;CL:0000066,9.61e-15,25;CL:0002076,7.25e-14,15;CL:0000075,2.07e-13,7;CL:0000215,1.13e-08,3;CL:0002250,1.59e-08,3 | |||
|ontology_enrichment_disease=DOID:0050686!2.64e-08!6 | |ontology_enrichment_disease=DOID:0050686!2.64e-08!6 | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.63e-10!9;UBERON:0004808!1.63e-10!9;UBERON:0001277!1.63e-10!9;UBERON:0000485!2.36e-08!11;UBERON:0001242!7.29e-07!13;UBERON:0000060!7.29e-07!13;UBERON:0001262!7.29e-07!13;UBERON:0004786!7.29e-07!13;UBERON:0002410!9.70e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.06e-23,1;UBERON:0001281,3.06e-23,1;UBERON:0000353,3.06e-23,1;UBERON:0003497,3.06e-23,1;UBERON:0003909,3.06e-23,1;UBERON:0003928,3.06e-23,1;UBERON:0003835,3.06e-23,1;UBERON:0003513,3.06e-23,1;UBERON:0001280,3.06e-23,1;UBERON:0004647,3.06e-23,1;UBERON:0002294,3.06e-23,1;UBERON:0001173,3.06e-23,1;UBERON:0004912,3.06e-23,1;UBERON:0005171,3.06e-23,1;UBERON:0003350,1.96e-22,9;UBERON:0004808,1.96e-22,9;UBERON:0001277,1.96e-22,9;UBERON:0000485,1.51e-18,11;UBERON:0001242,7.54e-16,13;UBERON:0001262,7.54e-16,13;UBERON:0004786,7.54e-16,13;UBERON:0000344,7.25e-14,15;UBERON:0004923,5.26e-09,24;UBERON:0000160,3.70e-07,31;UBERON:0003929,3.83e-07,55 | |||
|phase1_expression=0,0,0,0.90739263392049,3.00537437967808,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,0.866554859253824,0.166234645358492,2.85837098767317,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0.919218786610021,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,4.63783181922684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0.624075346229121,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.90739263392049,3.00537437967808,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,0.866554859253824,0.166234645358492,2.85837098767317,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0.919218786610021,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,4.63783181922684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0.624075346229121,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:3221171..3221187,+ | |short_description=p@chr8:3221171..3221187,+ | ||
}} | }} |
Latest revision as of 08:00, 6 August 2015
Short description: | p@chr8:3221171..3221187, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:3221171..3221187, + |
Coexpression cluster: | MCL_coexpression_mm9:451 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.06e-23 | 1 |
meso-epithelial cell | 3.06e-23 | 1 |
endothelial cell | 3.06e-23 | 1 |
endothelial cell of sinusoid | 3.06e-23 | 1 |
endothelial cell of hepatic sinusoid | 3.06e-23 | 1 |
intestinal epithelial cell | 1.96e-22 | 9 |
epithelial cell of alimentary canal | 1.96e-22 | 9 |
endodermal cell | 3.40e-18 | 20 |
brush border epithelial cell | 1.87e-15 | 6 |
gut absorptive cell | 1.87e-15 | 6 |
enterocyte | 1.87e-15 | 6 |
epithelial cell | 9.61e-15 | 25 |
endo-epithelial cell | 7.25e-14 | 15 |
columnar/cuboidal epithelial cell | 2.07e-13 | 7 |
barrier cell | 1.13e-08 | 3 |
intestinal crypt stem cell | 1.59e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.06e-23 | 1 |
hepatic sinusoid | 3.06e-23 | 1 |
parenchyma | 3.06e-23 | 1 |
abdomen blood vessel | 3.06e-23 | 1 |
sinusoid | 3.06e-23 | 1 |
digestive system duct | 3.06e-23 | 1 |
abdominal segment blood vessel | 3.06e-23 | 1 |
trunk blood vessel | 3.06e-23 | 1 |
liver parenchyma | 3.06e-23 | 1 |
liver lobule | 3.06e-23 | 1 |
biliary system | 3.06e-23 | 1 |
biliary tree | 3.06e-23 | 1 |
biliary bud | 3.06e-23 | 1 |
hepatic duct | 3.06e-23 | 1 |
epithelium of mucosa | 1.96e-22 | 9 |
gastrointestinal system epithelium | 1.96e-22 | 9 |
intestinal epithelium | 1.96e-22 | 9 |
simple columnar epithelium | 1.51e-18 | 11 |
intestinal mucosa | 7.54e-16 | 13 |
wall of intestine | 7.54e-16 | 13 |
gastrointestinal system mucosa | 7.54e-16 | 13 |
mucosa | 7.25e-14 | 15 |
organ component layer | 5.26e-09 | 24 |
intestine | 3.70e-07 | 31 |
gut epithelium | 3.83e-07 | 55 |