FFCP PHASE1:Hg19::chrX:47967364..47967379,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100509575,280657 | |EntrezGene=100509575,280657 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19652 | |HGNC=19652 | ||
|TSSclassifier=strong | |||
|UniProt=Q7RTT6,B7Z813 | |UniProt=Q7RTT6,B7Z813 | ||
|association_with_transcript=0bp_to_ENST00000319275,ENST00000376932,ENST00000412590,NM_001205103,NR_028366,uc011mlv.1_5end | |association_with_transcript=0bp_to_ENST00000319275,ENST00000376932,ENST00000412590,NM_001205103,NR_028366,uc011mlv.1_5end | ||
|cluster_id=chrX:47967364..47967379,+ | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_1_at_SSX6_5end | |description=CAGE_peak_1_at_SSX6_5end | ||
|id=chrX:47967364..47967379,+ | |id=chrX:47967364..47967379,+ | ||
|ontology_enrichment_celltype=CL:0002097!1.61e-13!2;CL:0000174!2.64e-09!3;CL:0002127!1.42e-07!1;CL:0000914!1.42e-07!1;CL:0000911!1.42e-07!1;CL:0000814!1.42e-07!1;CL:0002042!1.42e-07!1;CL:0002039!1.42e-07!1;CL:0002040!1.42e-07!1;CL:0002041!1.42e-07!1;CL:0000819!2.35e-07!1 | |ontology_enrichment_celltype=CL:0002097!1.61e-13!2;CL:0000174!2.64e-09!3;CL:0002127!1.42e-07!1;CL:0000914!1.42e-07!1;CL:0000911!1.42e-07!1;CL:0000814!1.42e-07!1;CL:0002042!1.42e-07!1;CL:0002039!1.42e-07!1;CL:0002040!1.42e-07!1;CL:0002041!1.42e-07!1;CL:0000819!2.35e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002097;1.91e-15;2!CL:0000174;9.43e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,2.05e-15,2;CL:0000174,9.90e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050686!3.85e-12!137;DOID:162!2.67e-11!235;DOID:14566!5.84e-11!239;DOID:0060058!4.25e-10!10;DOID:2531!2.56e-08!51;DOID:0060083!2.56e-08!51;DOID:6193!7.03e-08!1;DOID:2355!8.00e-08!1;DOID:1036!1.93e-07!8;DOID:0060073!2.35e-07!1;DOID:8675!2.35e-07!1 | |ontology_enrichment_disease=DOID:0050686!3.85e-12!137;DOID:162!2.67e-11!235;DOID:14566!5.84e-11!239;DOID:0060058!4.25e-10!10;DOID:2531!2.56e-08!51;DOID:0060083!2.56e-08!51;DOID:6193!7.03e-08!1;DOID:2355!8.00e-08!1;DOID:1036!1.93e-07!8;DOID:0060073!2.35e-07!1;DOID:8675!2.35e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:6193;9.99e-30;1!DOID:2355;2.05e-29;1!DOID:3350;1.33e-15;2!DOID:74;1.91e-15;2!DOID:0060058;2.18e-12;10!DOID:5409;1.96e-08;4!DOID:1287;2.18e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,9.99e-30,1;DOID:2355,1.78e-29,1;DOID:3350,1.33e-15,2;DOID:74,1.78e-15,2;DOID:0060058,2.12e-12,10;DOID:5409,1.96e-08,4;DOID:1287,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002369!2.64e-09!3;UBERON:0001235!2.64e-09!3;UBERON:0006858!2.64e-09!3 | |ontology_enrichment_uberon=UBERON:0002369!2.64e-09!3;UBERON:0001235!2.64e-09!3;UBERON:0006858!2.64e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;9.43e-11;3!UBERON:0001235;9.43e-11;3!UBERON:0006858;9.43e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,9.90e-11,3;UBERON:0001235,9.90e-11,3;UBERON:0006858,9.90e-11,3 | |||
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|short_description=p1@SSX6 | |short_description=p1@SSX6 | ||
}} | }} |
Latest revision as of 17:44, 15 September 2015
Short description: | p1@SSX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SSX6_5end |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | 0bp_to_ENST00000319275, ENST00000376932, ENST00000412590, NM_001205103, NR_028366, uc011mlv.1_5end |
EntrezGene: | 100509575,280657 |
HGNC: | 19652 |
UniProt: | Q7RTT6B7Z813 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 2.05e-15 | 2 |
steroid hormone secreting cell | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 9.90e-11 | 3 |
adrenal cortex | 9.90e-11 | 3 |
adrenal/interrenal gland | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 9.99e-30 | 1 |
anemia | 1.78e-29 | 1 |
mesenchymal cell neoplasm | 1.33e-15 | 2 |
hematopoietic system disease | 1.78e-15 | 2 |
lymphoma | 2.12e-12 | 10 |
lung small cell carcinoma | 1.96e-08 | 4 |
cardiovascular system disease | 2.11e-08 | 4 |