FFCP PHASE1:Hg19::chr10:101292684..101292706,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=159296 | |EntrezGene=159296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7836 | |HGNC=7836 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAU0 | |UniProt=Q8TAU0 | ||
|association_with_transcript=0bp_to_ENST00000344586,NM_145285,uc009xwj.2_5end | |association_with_transcript=0bp_to_ENST00000344586,NM_145285,uc009xwj.2_5end | ||
|cluster_id=chr10:101292684..101292706,+ | |||
|description=CAGE_peak_1_at_NKX2-3_5end | |description=CAGE_peak_1_at_NKX2-3_5end | ||
|id=chr10:101292684..101292706,+ | |id=chr10:101292684..101292706,+ | ||
|ontology_enrichment_celltype=CL:0002504!2.98e-08!3;CL:1000279!2.98e-08!3;CL:1000280!2.98e-08!3 | |ontology_enrichment_celltype=CL:0002504!2.98e-08!3;CL:1000279!2.98e-08!3;CL:1000280!2.98e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002504;2.71e-16;3!CL:1000279;2.71e-16;3!CL:1000280;2.71e-16;3!CL:0002554;1.79e-11;2 | |ontology_enrichment_celltype_v019=CL:0002504;2.71e-16;3!CL:1000279;2.71e-16;3!CL:1000280;2.71e-16;3!CL:0002554;1.79e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002504,2.92e-16,3;CL:1000279,2.92e-16,3;CL:1000280,2.92e-16,3;CL:0002554,1.79e-11,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.40e-19!35;UBERON:0000059!6.92e-17!11;UBERON:0000160!3.66e-16!27;UBERON:0001155!5.18e-13!9;UBERON:0001007!3.91e-12!155;UBERON:0001555!3.91e-12!155;UBERON:0007026!3.91e-12!155;UBERON:0004119!2.72e-10!169;UBERON:0000925!2.72e-10!169;UBERON:0006595!2.72e-10!169;UBERON:0004921!3.41e-09!129;UBERON:0004185!3.41e-09!129 | |ontology_enrichment_uberon=UBERON:0005409!1.40e-19!35;UBERON:0000059!6.92e-17!11;UBERON:0000160!3.66e-16!27;UBERON:0001155!5.18e-13!9;UBERON:0001007!3.91e-12!155;UBERON:0001555!3.91e-12!155;UBERON:0007026!3.91e-12!155;UBERON:0004119!2.72e-10!169;UBERON:0000925!2.72e-10!169;UBERON:0006595!2.72e-10!169;UBERON:0004921!3.41e-09!129;UBERON:0004185!3.41e-09!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.10e-40;17!UBERON:0005409;8.89e-36;22!UBERON:0000059;1.90e-29;11!UBERON:0001155;1.05e-27;9!UBERON:0004921;4.25e-25;33!UBERON:0001555;3.43e-11;54!UBERON:0002108;4.47e-10;4!UBERON:0001007;4.22e-09;81!UBERON:0002106;3.18e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0000160;9.10e-40;17!UBERON:0005409;8.89e-36;22!UBERON:0000059;1.90e-29;11!UBERON:0001155;1.05e-27;9!UBERON:0004921;4.25e-25;33!UBERON:0001555;3.43e-11;54!UBERON:0002108;4.47e-10;4!UBERON:0001007;4.22e-09;81!UBERON:0002106;3.18e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.01e-42,25;UBERON:0000160,9.26e-40,17;UBERON:0000059,2.04e-29,11;UBERON:0001155,1.13e-27,9;UBERON:0002108,4.27e-10,4;UBERON:0001007,1.31e-09,145;UBERON:0001555,1.31e-09,145;UBERON:0007026,1.31e-09,145;UBERON:0004921,7.34e-09,118;UBERON:0004119,2.60e-08,160;UBERON:0000925,2.60e-08,160;UBERON:0006595,2.60e-08,160;UBERON:0002106,3.18e-08,3;UBERON:0004854,3.18e-08,3;UBERON:0009034,3.18e-08,3;UBERON:0002095,3.18e-08,3;UBERON:0004782,3.18e-08,3;UBERON:0003281,3.18e-08,3;UBERON:0009664,3.18e-08,3;UBERON:0002296,3.18e-08,3;UBERON:0005602,3.18e-08,3;UBERON:0001179,3.18e-08,3;UBERON:0006293,3.18e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,1.05506791291381,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,2.93600439334847,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60856642895129,0,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9219363432563,21.5585442544872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,1.43402297694502,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,1.74306691720059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1457152493312,14.2759255462748,9.30717978530923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,39.8731992921111,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,11.8802083678393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.760531603454056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8910244148056,13.2686346755009,22.6081153625441,0,0,0,0,0,0,0,0,0,0,24.1981432097328,0.30607276163049,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.195551382734803,0,9.81883775801022,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0.992332043623902,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,3.80805212168795,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,7.59763327567289,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33458648470704,0,0,0,0,1.24415452006595,0,0,0.157265941855896,0,0,9.99102124477909,0,0,0,0,0,0,64.311550244172,0.0642292250964595,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,4.68908406739856,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,34.7000313793608,0,0,0,0,0,1.73858272302579,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.118920090777569,0,0.109940516745429,0,11.9619945067314,24.6972303369472,0,0,0,0,0,0,0,29.8868859175934,45.0560636935304,0,0.178553938605658,0,0,2.19100916473955,0.458729283404541,0,8.67743592062515,0,0,14.2837246939158,0,0,0,0,0,0.126698501011437,0,0,0.735159196278759,0,0,0,0,0,0.426467963801962,0.476128862927481,0.129177819672012,0.434523000071005,0,0.190941474834495,1.0105859447911,0.653150243690884,5.81796611844978,2.6940821205835,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,1.05506791291381,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,2.93600439334847,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60856642895129,0,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9219363432563,21.5585442544872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,1.43402297694502,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,1.74306691720059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1457152493312,14.2759255462748,9.30717978530923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,39.8731992921111,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,11.8802083678393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.760531603454056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8910244148056,13.2686346755009,22.6081153625441,0,0,0,0,0,0,0,0,0,0,24.1981432097328,0.30607276163049,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.195551382734803,0,9.81883775801022,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0.992332043623902,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,3.80805212168795,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,7.59763327567289,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33458648470704,0,0,0,0,1.24415452006595,0,0,0.157265941855896,0,0,9.99102124477909,0,0,0,0,0,0,64.311550244172,0.0642292250964595,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,4.68908406739856,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,34.7000313793608,0,0,0,0,0,1.73858272302579,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.118920090777569,0,0.109940516745429,0,11.9619945067314,24.6972303369472,0,0,0,0,0,0,0,29.8868859175934,45.0560636935304,0,0.178553938605658,0,0,2.19100916473955,0.458729283404541,0,8.67743592062515,0,0,14.2837246939158,0,0,0,0,0,0.126698501011437,0,0,0.735159196278759,0,0,0,0,0,0.426467963801962,0.476128862927481,0.129177819672012,0.434523000071005,0,0.190941474834495,1.0105859447911,0.653150243690884,5.81796611844978,2.6940821205835,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p1@NKX2-3 | |short_description=p1@NKX2-3 | ||
}} | }} |
Latest revision as of 18:46, 15 September 2015
Short description: | p1@NKX2-3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKX2-3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344586, NM_145285, uc009xwj.2_5end |
EntrezGene: | NKX2-3 |
HGNC: | 7836 |
UniProt: | Q8TAU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 2.92e-16 | 3 |
smooth muscle cell of large intestine | 2.92e-16 | 3 |
smooth muscle cell of colon | 2.92e-16 | 3 |
fibroblast of lymphatic vessel | 1.79e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.01e-42 | 25 |
intestine | 9.26e-40 | 17 |
large intestine | 2.04e-29 | 11 |
colon | 1.13e-27 | 9 |
small intestine | 4.27e-10 | 4 |
digestive system | 1.31e-09 | 145 |
digestive tract | 1.31e-09 | 145 |
primitive gut | 1.31e-09 | 145 |
subdivision of digestive tract | 7.34e-09 | 118 |
endoderm-derived structure | 2.60e-08 | 160 |
endoderm | 2.60e-08 | 160 |
presumptive endoderm | 2.60e-08 | 160 |
spleen | 3.18e-08 | 3 |
gastrointestinal system mesentery | 3.18e-08 | 3 |
stomach region | 3.18e-08 | 3 |
mesentery | 3.18e-08 | 3 |
gastrointestinal system serosa | 3.18e-08 | 3 |
mesentery of stomach | 3.18e-08 | 3 |
gut mesentery | 3.18e-08 | 3 |
dorsal mesentery | 3.18e-08 | 3 |
dorsal mesogastrium | 3.18e-08 | 3 |
peritoneal cavity | 3.18e-08 | 3 |
spleen primordium | 3.18e-08 | 3 |