FFCP PHASE1:Hg19::chr20:33759924..33759940,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:33759924..33759940,+ to FFCP PHASE1:Hg19::chr20:33759924..33759940,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10544 | |EntrezGene=10544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9452 | |HGNC=9452 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNN8 | |UniProt=Q9UNN8 | ||
|association_with_transcript=150bp_to_ENST00000216968,NM_006404,uc002xbt.2_5end | |||
|cluster_id=chr20:33759924..33759940,+ | |||
|coexpression_cluster_id=C4027 | |||
|description=CAGE_peak_6_at_PROCR_5end | |||
|id=chr20:33759924..33759940,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.83e-17!24;CL:0000115!6.17e-16!35;CL:0000071!4.18e-14!18;CL:0002546!4.18e-14!18;CL:0002078!5.59e-14!44;CL:0000222!9.73e-13!119;CL:0000213!5.24e-12!57;CL:0000215!5.24e-12!57;CL:1000413!4.84e-08!9;CL:0002334!2.63e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.73e-31;24!CL:0000115;2.33e-26;36!CL:0000071;7.69e-26;18!CL:0002078;6.68e-18;45!CL:1000413;4.61e-14;9!CL:0000213;5.24e-14;58!CL:0000215;5.24e-14;58!CL:0002543;7.00e-10;6!CL:0002544;1.18e-09;6!CL:0002334;1.37e-07;12!CL:0002138;3.81e-07;6!CL:0000153;4.17e-07;9!CL:0000447;4.17e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.82e-31,24;CL:0000115,5.26e-31,36;CL:0002078,1.13e-26,45;CL:0000071,4.92e-26,18;CL:0002546,4.92e-26,18;CL:0000213,1.50e-22,58;CL:0000215,1.50e-22,58;CL:1000413,3.39e-14,9;CL:0000222,1.50e-13,121;CL:0002543,6.53e-10,6;CL:0002544,8.93e-10,6;CL:0002334,8.72e-08,12;CL:0000153,3.60e-07,9;CL:0000447,3.60e-07,9;CL:0005020,5.68e-07,6;CL:0002138,5.68e-07,6;CL:0005022,5.68e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.69e-26;18!CL:0005022;3.81e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.32e-19!69;UBERON:0001981!6.61e-18!60;UBERON:0007500!6.61e-18!60;UBERON:0004537!6.61e-18!60;UBERON:0006965!6.61e-18!60;UBERON:0004872!2.32e-17!84;UBERON:0002049!1.16e-16!79;UBERON:0007798!1.16e-16!79;UBERON:0003914!3.31e-14!118;UBERON:0001986!4.18e-14!18;UBERON:0004638!4.18e-14!18;UBERON:0004852!4.18e-14!18;UBERON:0006914!1.26e-13!25;UBERON:0000487!2.55e-13!22;UBERON:0000468!4.60e-13!659;UBERON:0001009!3.88e-12!113;UBERON:0004535!8.37e-12!110;UBERON:0000926!2.79e-11!448;UBERON:0004120!2.79e-11!448;UBERON:0006603!2.79e-11!448;UBERON:0000467!5.89e-11!625;UBERON:0000480!8.76e-11!626;UBERON:0001637!6.46e-09!42;UBERON:0003509!6.46e-09!42;UBERON:0004572!6.46e-09!42;UBERON:0000490!4.37e-08!138;UBERON:0003915!4.84e-08!9;UBERON:0004700!4.84e-08!9;UBERON:0001917!4.84e-08!9;UBERON:0004573!5.56e-08!33;UBERON:0004571!5.56e-08!33;UBERON:0000922!1.86e-07!612;UBERON:0003081!3.37e-07!216;UBERON:0004111!6.08e-07!241;UBERON:0002050!6.84e-07!605;UBERON:0005423!6.84e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.69e-26;18!UBERON:0001986;7.69e-26;18!UBERON:0004852;7.69e-26;18!UBERON:0006914;1.66e-23;25!UBERON:0000487;4.70e-22;22!UBERON:0003915;4.61e-14;9!UBERON:0004700;4.61e-14;9!UBERON:0001917;4.61e-14;9!UBERON:0000490;5.05e-13;33!UBERON:0000055;1.41e-12;65!UBERON:0007500;1.28e-10;56!UBERON:0001981;1.28e-10;56!UBERON:0004537;1.28e-10;56!UBERON:0001637;2.41e-09;42!UBERON:0003509;2.41e-09;42!UBERON:0004572;2.41e-09;42!UBERON:0003914;6.01e-09;74!UBERON:0004573;1.10e-08;33!UBERON:0004571;1.10e-08;33!UBERON:0001638;3.52e-08;9!UBERON:0003920;3.52e-08;9!UBERON:0004582;3.52e-08;9!UBERON:0004457;5.71e-08;9!UBERON:0000042;5.71e-08;9!UBERON:0002049;6.18e-08;75!UBERON:0007798;6.18e-08;75!UBERON:0000947;2.31e-07;21!UBERON:0010191;2.31e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.92e-26,18;UBERON:0001986,4.92e-26,18;UBERON:0004852,4.92e-26,18;UBERON:0000055,4.99e-24,68;UBERON:0006914,1.30e-23,25;UBERON:0000487,3.58e-22,22;UBERON:0007500,6.59e-21,59;UBERON:0001981,6.59e-21,59;UBERON:0004537,6.59e-21,59;UBERON:0006965,6.59e-21,59;UBERON:0002049,3.10e-19,78;UBERON:0007798,3.10e-19,78;UBERON:0004872,1.49e-16,83;UBERON:0003914,1.70e-14,117;UBERON:0003915,3.39e-14,9;UBERON:0004700,3.39e-14,9;UBERON:0001917,3.39e-14,9;UBERON:0004535,2.18e-13,109;UBERON:0001009,1.10e-12,112;UBERON:0000926,3.78e-12,315;UBERON:0004120,3.78e-12,315;UBERON:0006603,3.78e-12,315;UBERON:0001637,1.13e-09,42;UBERON:0003509,1.13e-09,42;UBERON:0004572,1.13e-09,42;UBERON:0003081,2.57e-09,203;UBERON:0004573,2.68e-09,33;UBERON:0004571,2.68e-09,33;UBERON:0001638,4.02e-08,9;UBERON:0003920,4.02e-08,9;UBERON:0004582,4.02e-08,9;UBERON:0000947,3.21e-07,21;UBERON:0010191,3.21e-07,21 | |||
|phase1_expression=1.99846217197612,1.92690471501885,5.21531295155093,3.00219895059391,2.68176656656373,6.97870819280295,0,0.631719873426831,0.261185628199839,0.491467873003018,0.697801167972428,0,0,0.37129905888014,0.331397375727916,0.672325146451775,1.20538905604795,0,0.487932798790507,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0,0.232429036905685,0,0.309706370895104,1.7261543539329,2.81776777182011,1.6553756092201,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.674170453335254,0.306083892370903,0,0,4.61791820261403,3.39088217956774,3.40979800426155,0,0,0,1.25624332628372,2.60741459210101,1.52032191293582,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,2.53007406669196,1.50401373190767,1.30361867064741,3.9764297352555,2.91980922181582,0.0945348171640679,0,0,0.261958150995425,0.364295288292542,0.370784442784429,0,0,0,0,0,0,5.36658499890104,4.30117297553062,6.2485290289367,6.78369530308812,10.4874859052476,4.67700671298115,6.68783892917794,2.32575083252396,1.42306505074684,2.34304428935269,2.81980521976403,3.04108842287405,2.4406205754817,1.83831540172934,4.0507097394088,3.66128885964727,4.4905874525234,3.37834441449967,4.5994991239765,4.74632829784064,5.1296488300514,0,0,0,0.496971951695318,0.379891534993739,0.397227542439656,3.44203944898576,1.06400514659507,0,0,0.74000264525148,0,0.67355336034844,1.30769522490767,0,0.576175924479999,0,0.312160076830321,2.2818872861778,0.448346041655403,0,0.161872944368132,0.280901613404497,0.61246251376468,0,0.206651562351531,0,0,0.910161361938026,0,0,0,0,0.438977620880838,0,0.150238058906597,0.794025282120147,0.538168907066586,0,0,1.50045548042201,0.309157587715317,0.257640540045629,0.558350568994769,1.5189869901714,0.876933046450788,0,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0.966304265816484,0.818238361772504,0,0.121973706129595,0.530119073285941,0.232387885739037,0.10366105501537,0,0.36497735907583,0,1.28648187638577,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0.38474715694639,4.42893272774789,4.20725321410337,2.057870056657,0,0,0,0.590789906681404,0,0,0.343135620597051,0.548751427043128,0,0.301586917234893,0.462942225792648,0,0,0,0,0,1.15493158208859,1.85194205030644,1.14152491340759,0,0,0,0.234004265139238,2.0808362720422,2.81201501960331,1.51183915378974,1.41775097242386,0,0,1.53353071666084,0,0.088048434013226,0.414656231081544,0.720599767084807,0.25248486685276,0,0.381988425558278,0,0,0,0,0.285826432630578,0.112131084345361,0,0.36669142910475,0.775630294546667,0,0,0,0,0,1.41849132023278,1.0656887160644,0,2.71310802695722,0.823240336780769,0.977208552881205,0,0,1.50719688529793,0.871533458600294,2.89921674427965,0,0.502257091432126,0,0.239624855491583,0,1.42636905040718,1.15825045334063,0.61642896765115,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0.604780586659361,1.48864684691266,0.920771839728375,1.68396056659844,3.58789617915963,2.04682899626681,0.965123526861645,5.93672265779964,1.54209693802656,1.59805552781814,0.9033987161519,1.55776328755086,3.37010097533882,0,0.40101294060657,0.184161977871793,0.459257792658427,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,5.68666920354483,4.08224892663638,2.59099099322567,3.08454505380579,0.541892875087706,0,0,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,1.44257416306811,0.366277859273374,0,0,2.60024098414608,0,0,0.924291702687866,0.767518373630648,0,0.322260734604821,0.145016693914229,0.255679882248303,0.178064071293475,0.165284915360978,1.15314040419064,0.510450849978337,0,0.464845549297286,1.5740617341532,0,0.616067160352178,1.06461206063404,0,0.37064843820784,0.429374660225974,0,0,0.190630193923825,0,0,0.318203247925937,0,0.359744915166629,0.54907405947211,0.235624804691373,2.22400729730648,1.58510321173008,1.68503382495592,0,3.1682753652067,3.16950440270266,1.09199929126389,0.707027159768564,0,0,0,2.19225442626881,2.31510213706675,0,0.202910376962704,0.30982349809975,0.281695602532241,0.430234056612155,0.687743287091848,0,0.354761064070598,3.37772216476263,7.57378253807774,0,0.349934720244983,0.288666338176536,0,0,0.753150406214233,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,7.05038869441323,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.447352215784832,0.333698283423817,0.19538809540204,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,1.42068073403207,0,0.296964680832639,0,0,0.281338832821026,0.222617410045812,0,0,3.58646378851925,0,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0.1137934482855,0.5085073005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| ||
|short_description=p6@PROCR | |||
}} | }} |
Latest revision as of 19:25, 15 September 2015
Short description: | p6@PROCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PROCR_5end |
Coexpression cluster: | C4027_Wilms_Endothelial_mesothelioma_Renal_mesenchymal_leiomyoma_Fibroblast |
Association with transcript: | 150bp_to_ENST00000216968, NM_006404, uc002xbt.2_5end |
EntrezGene: | PROCR |
HGNC: | 9452 |
UniProt: | Q9UNN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.82e-31 | 24 |
endothelial cell | 5.26e-31 | 36 |
meso-epithelial cell | 1.13e-26 | 45 |
blood vessel endothelial cell | 4.92e-26 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.92e-26 | 18 |
lining cell | 1.50e-22 | 58 |
barrier cell | 1.50e-22 | 58 |
endothelial cell of artery | 3.39e-14 | 9 |
mesodermal cell | 1.50e-13 | 121 |
vein endothelial cell | 6.53e-10 | 6 |
aortic endothelial cell | 8.93e-10 | 6 |
preadipocyte | 8.72e-08 | 12 |
GAG secreting cell | 3.60e-07 | 9 |
carbohydrate secreting cell | 3.60e-07 | 9 |
lymphangioblast | 5.68e-07 | 6 |
endothelial cell of lymphatic vessel | 5.68e-07 | 6 |
vascular lymphangioblast | 5.68e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.92e-26 | 18 |
endothelium | 4.92e-26 | 18 |
cardiovascular system endothelium | 4.92e-26 | 18 |
vessel | 4.99e-24 | 68 |
squamous epithelium | 1.30e-23 | 25 |
simple squamous epithelium | 3.58e-22 | 22 |
epithelial tube open at both ends | 6.59e-21 | 59 |
blood vessel | 6.59e-21 | 59 |
blood vasculature | 6.59e-21 | 59 |
vascular cord | 6.59e-21 | 59 |
vasculature | 3.10e-19 | 78 |
vascular system | 3.10e-19 | 78 |
splanchnic layer of lateral plate mesoderm | 1.49e-16 | 83 |
epithelial tube | 1.70e-14 | 117 |
endothelial tube | 3.39e-14 | 9 |
arterial system endothelium | 3.39e-14 | 9 |
endothelium of artery | 3.39e-14 | 9 |
cardiovascular system | 2.18e-13 | 109 |
circulatory system | 1.10e-12 | 112 |
mesoderm | 3.78e-12 | 315 |
mesoderm-derived structure | 3.78e-12 | 315 |
presumptive mesoderm | 3.78e-12 | 315 |
artery | 1.13e-09 | 42 |
arterial blood vessel | 1.13e-09 | 42 |
arterial system | 1.13e-09 | 42 |
lateral plate mesoderm | 2.57e-09 | 203 |
systemic artery | 2.68e-09 | 33 |
systemic arterial system | 2.68e-09 | 33 |
vein | 4.02e-08 | 9 |
venous blood vessel | 4.02e-08 | 9 |
venous system | 4.02e-08 | 9 |
aorta | 3.21e-07 | 21 |
aortic system | 3.21e-07 | 21 |