FFCP PHASE1:Hg19::chr14:70263920..70263934,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6554 | |EntrezGene=6554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10905 | |HGNC=10905 | ||
|TSSclassifier=strong | |||
|UniProt=Q14973,B2RA41 | |UniProt=Q14973,B2RA41 | ||
|association_with_transcript=71bp_to_ENST00000216540,NM_003049,uc001xlr.2_5end | |association_with_transcript=71bp_to_ENST00000216540,NM_003049,uc001xlr.2_5end | ||
|cluster_id=chr14:70263920..70263934,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_SLC10A1_5end | |description=CAGE_peak_3_at_SLC10A1_5end | ||
|id=chr14:70263920..70263934,- | |id=chr14:70263920..70263934,- | ||
|ontology_enrichment_celltype=CL:0000181!1.60e-27!12;CL:0000417!1.60e-27!12;CL:0000668!1.60e-27!12;CL:0000414!1.60e-27!12;CL:0000412!1.60e-27!12;CL:0000182!1.60e-27!12;CL:0002563!2.41e-14!4;CL:0000223!1.24e-13!59;CL:0002253!5.37e-08!2 | |ontology_enrichment_celltype=CL:0000181!1.60e-27!12;CL:0000417!1.60e-27!12;CL:0000668!1.60e-27!12;CL:0000414!1.60e-27!12;CL:0000412!1.60e-27!12;CL:0000182!1.60e-27!12;CL:0002563!2.41e-14!4;CL:0000223!1.24e-13!59;CL:0002253!5.37e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002563;5.64e-19;4!CL:0000182;2.88e-14;12!CL:0002253;2.49e-10;2!CL:0002231;3.16e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.64e-19,4;CL:0000182,2.88e-14,12;CL:0000223,4.54e-11,58;CL:0002253,2.49e-10,2;CL:0002231,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;2.36e-08;58!UBERON:0004161;1.62e-07;11 | |||
|ontology_enrichment_disease=DOID:114!7.52e-08!2 | |ontology_enrichment_disease=DOID:114!7.52e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.37e-33!19;UBERON:0006925!1.37e-33!19;UBERON:0008836!1.37e-33!19;UBERON:0008835!5.84e-29!22;UBERON:0003894!5.84e-29!22;UBERON:0009854!1.10e-27!23;UBERON:0007499!1.94e-25!25;UBERON:0009497!1.94e-25!25;UBERON:0000015!1.94e-25!25;UBERON:0002423!1.94e-25!25;UBERON:0006235!1.94e-25!25;UBERON:0004161!1.94e-25!25;UBERON:0005057!1.92e-24!26;UBERON:0009856!1.92e-24!26;UBERON:0003929!1.95e-23!54;UBERON:0002365!1.97e-20!31;UBERON:0002330!1.97e-20!31;UBERON:0002368!4.80e-18!35;UBERON:0005911!4.51e-15!82;UBERON:0001242!2.41e-14!4;UBERON:0001262!2.41e-14!4;UBERON:0004786!2.41e-14!4;UBERON:0004808!2.41e-14!4;UBERON:0001277!2.41e-14!4;UBERON:0000949!6.31e-14!45;UBERON:0002530!1.24e-13!59;UBERON:0003350!1.15e-11!5;UBERON:0005172!2.68e-11!55;UBERON:0005173!2.68e-11!55;UBERON:0002417!3.93e-10!61;UBERON:0000916!3.93e-10!61;UBERON:0004921!4.40e-09!129;UBERON:0004185!4.40e-09!129;UBERON:0000490!1.74e-08!138;UBERON:0001007!2.29e-07!155;UBERON:0001555!2.29e-07!155;UBERON:0007026!2.29e-07!155;UBERON:0000077!2.69e-07!130;UBERON:0000485!7.21e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.13e-24;19!UBERON:0006925;7.13e-24;19!UBERON:0001242;5.64e-19;4!UBERON:0001262;5.64e-19;4!UBERON:0004786;5.64e-19;4!UBERON:0004808;5.64e-19;4!UBERON:0001277;5.64e-19;4!UBERON:0002423;3.42e-18;25!UBERON:0002365;1.13e-14;31!UBERON:0002330;1.13e-14;31!UBERON:0002368;1.05e-12;33!UBERON:0000485;2.83e-11;7!UBERON:0003929;2.83e-11;7!UBERON:0003350;5.54e-10;8!UBERON:0000949;2.68e-09;43!UBERON:0001007;3.72e-09;81!UBERON:0002530;2.77e-07;57!UBERON:0005172;8.67e-07;52!UBERON:0005173;8.67e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.47e-24,19;UBERON:0006925,7.47e-24,19;UBERON:0008836,7.47e-24,19;UBERON:0003929,7.01e-21,54;UBERON:0008835,1.25e-20,22;UBERON:0003894,1.25e-20,22;UBERON:0009854,9.65e-20,23;UBERON:0001242,5.64e-19,4;UBERON:0001262,5.64e-19,4;UBERON:0004786,5.64e-19,4;UBERON:0004808,5.64e-19,4;UBERON:0001277,5.64e-19,4;UBERON:0007499,3.54e-18,25;UBERON:0009497,3.54e-18,25;UBERON:0000015,3.54e-18,25;UBERON:0002423,3.54e-18,25;UBERON:0006235,3.54e-18,25;UBERON:0004161,3.54e-18,25;UBERON:0009856,1.74e-17,26;UBERON:0002365,1.09e-14,31;UBERON:0002330,1.09e-14,31;UBERON:0005911,1.30e-13,82;UBERON:0002368,5.04e-13,35;UBERON:0002530,7.03e-11,59;UBERON:0000949,3.79e-10,45;UBERON:0003350,5.54e-10,8;UBERON:0004921,3.17e-09,118;UBERON:0000485,5.64e-09,9;UBERON:0005172,1.83e-08,54;UBERON:0005173,1.83e-08,54;UBERON:0002417,1.28e-07,60;UBERON:0000916,1.28e-07,60;UBERON:0001007,2.05e-07,145;UBERON:0001555,2.05e-07,145;UBERON:0007026,2.05e-07,145;UBERON:0000490,2.63e-07,148 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.8556719377534,2.94848165003288,8.86184860022106,0,6.02643348861256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.9004928321006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8102261037207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1097675715467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.1295054987056,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.8556719377534,2.94848165003288,8.86184860022106,0,6.02643348861256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.9004928321006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8102261037207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1097675715467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.1295054987056,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@SLC10A1 | |short_description=p3@SLC10A1 | ||
}} | }} |
Latest revision as of 19:55, 15 September 2015
Short description: | p3@SLC10A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC10A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 71bp_to_ENST00000216540, NM_003049, uc001xlr.2_5end |
EntrezGene: | SLC10A1 |
HGNC: | 10905 |
UniProt: | Q14973B2RA41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.64e-19 | 4 |
hepatocyte | 2.88e-14 | 12 |
endodermal cell | 4.54e-11 | 58 |
epithelial cell of large intestine | 2.49e-10 | 2 |
epithelial cell of prostate | 3.16e-07 | 3 |