FFCP PHASE1:Hg19::chr14:70263949..70263975,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6554 | |EntrezGene=6554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10905 | |HGNC=10905 | ||
|TSSclassifier=strong | |||
|UniProt=Q14973,B2RA41 | |UniProt=Q14973,B2RA41 | ||
|association_with_transcript=30bp_to_ENST00000216540,NM_003049,uc001xlr.2_5end | |association_with_transcript=30bp_to_ENST00000216540,NM_003049,uc001xlr.2_5end | ||
|cluster_id=chr14:70263949..70263975,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_SLC10A1_5end | |description=CAGE_peak_1_at_SLC10A1_5end | ||
|id=chr14:70263949..70263975,- | |id=chr14:70263949..70263975,- | ||
|ontology_enrichment_celltype=CL:0000181!7.54e-20!12;CL:0000417!7.54e-20!12;CL:0000668!7.54e-20!12;CL:0000414!7.54e-20!12;CL:0000412!7.54e-20!12;CL:0000182!7.54e-20!12;CL:0002563!1.33e-10!4;CL:0000223!2.12e-09!59 | |ontology_enrichment_celltype=CL:0000181!7.54e-20!12;CL:0000417!7.54e-20!12;CL:0000668!7.54e-20!12;CL:0000414!7.54e-20!12;CL:0000412!7.54e-20!12;CL:0000182!7.54e-20!12;CL:0002563!1.33e-10!4;CL:0000223!2.12e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.48e-20;4!CL:0000182;1.23e-15;12!CL:0002253;4.30e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.56e-20,4;CL:0000182,1.23e-15,12;CL:0002253,4.52e-11,2;CL:0000223,1.14e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.56e-08;11!UBERON:0009497;4.73e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.42e-24!19;UBERON:0006925!4.42e-24!19;UBERON:0008836!4.42e-24!19;UBERON:0008835!1.03e-20!22;UBERON:0003894!1.03e-20!22;UBERON:0009854!8.77e-20!23;UBERON:0003929!1.08e-19!54;UBERON:0007499!3.78e-18!25;UBERON:0009497!3.78e-18!25;UBERON:0000015!3.78e-18!25;UBERON:0002423!3.78e-18!25;UBERON:0006235!3.78e-18!25;UBERON:0004161!3.78e-18!25;UBERON:0005057!2.00e-17!26;UBERON:0009856!2.00e-17!26;UBERON:0002368!1.72e-16!35;UBERON:0002530!1.11e-14!59;UBERON:0002365!1.66e-14!31;UBERON:0002330!1.66e-14!31;UBERON:0000949!1.29e-12!45;UBERON:0005911!2.12e-12!82;UBERON:0000998!7.46e-11!1;UBERON:0006868!7.46e-11!1;UBERON:0002146!9.97e-11!1;UBERON:0005623!9.97e-11!1;UBERON:0001242!1.33e-10!4;UBERON:0001262!1.33e-10!4;UBERON:0004786!1.33e-10!4;UBERON:0004808!1.33e-10!4;UBERON:0001277!1.33e-10!4;UBERON:0005172!3.41e-10!55;UBERON:0005173!3.41e-10!55;UBERON:0002417!4.29e-09!61;UBERON:0000916!4.29e-09!61;UBERON:0003350!1.18e-08!5;UBERON:0000490!4.83e-08!138;UBERON:0001048!1.97e-07!168 | |ontology_enrichment_uberon=UBERON:0002107!4.42e-24!19;UBERON:0006925!4.42e-24!19;UBERON:0008836!4.42e-24!19;UBERON:0008835!1.03e-20!22;UBERON:0003894!1.03e-20!22;UBERON:0009854!8.77e-20!23;UBERON:0003929!1.08e-19!54;UBERON:0007499!3.78e-18!25;UBERON:0009497!3.78e-18!25;UBERON:0000015!3.78e-18!25;UBERON:0002423!3.78e-18!25;UBERON:0006235!3.78e-18!25;UBERON:0004161!3.78e-18!25;UBERON:0005057!2.00e-17!26;UBERON:0009856!2.00e-17!26;UBERON:0002368!1.72e-16!35;UBERON:0002530!1.11e-14!59;UBERON:0002365!1.66e-14!31;UBERON:0002330!1.66e-14!31;UBERON:0000949!1.29e-12!45;UBERON:0005911!2.12e-12!82;UBERON:0000998!7.46e-11!1;UBERON:0006868!7.46e-11!1;UBERON:0002146!9.97e-11!1;UBERON:0005623!9.97e-11!1;UBERON:0001242!1.33e-10!4;UBERON:0001262!1.33e-10!4;UBERON:0004786!1.33e-10!4;UBERON:0004808!1.33e-10!4;UBERON:0001277!1.33e-10!4;UBERON:0005172!3.41e-10!55;UBERON:0005173!3.41e-10!55;UBERON:0002417!4.29e-09!61;UBERON:0000916!4.29e-09!61;UBERON:0003350!1.18e-08!5;UBERON:0000490!4.83e-08!138;UBERON:0001048!1.97e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.94e-26;19!UBERON:0006925;2.94e-26;19!UBERON:0001242;1.48e-20;4!UBERON:0001262;1.48e-20;4!UBERON:0004786;1.48e-20;4!UBERON:0004808;1.48e-20;4!UBERON:0001277;1.48e-20;4!UBERON:0002423;5.08e-20;25!UBERON:0002365;3.73e-16;31!UBERON:0002330;3.73e-16;31!UBERON:0002368;5.56e-14;33!UBERON:0000485;3.43e-12;7!UBERON:0003929;3.43e-12;7!UBERON:0003350;8.68e-11;8!UBERON:0000949;3.28e-10;43!UBERON:0001007;5.12e-10;81!UBERON:0005172;1.97e-07;52!UBERON:0005173;1.97e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.87e-26,19;UBERON:0006925,2.87e-26,19;UBERON:0008836,2.87e-26,19;UBERON:0008835,1.00e-22,22;UBERON:0003894,1.00e-22,22;UBERON:0009854,9.49e-22,23;UBERON:0001242,1.56e-20,4;UBERON:0001262,1.56e-20,4;UBERON:0004786,1.56e-20,4;UBERON:0004808,1.56e-20,4;UBERON:0001277,1.56e-20,4;UBERON:0007499,4.98e-20,25;UBERON:0009497,4.98e-20,25;UBERON:0000015,4.98e-20,25;UBERON:0002423,4.98e-20,25;UBERON:0006235,4.98e-20,25;UBERON:0004161,4.98e-20,25;UBERON:0009856,2.87e-19,26;UBERON:0003929,9.45e-18,54;UBERON:0002365,3.40e-16,31;UBERON:0002330,3.40e-16,31;UBERON:0002368,2.30e-14,35;UBERON:0005911,1.27e-11,82;UBERON:0000949,3.32e-11,45;UBERON:0003350,8.90e-11,8;UBERON:0000485,1.10e-09,9;UBERON:0005172,2.36e-09,54;UBERON:0005173,2.36e-09,54;UBERON:0002530,1.44e-08,59;UBERON:0002417,2.00e-08,60;UBERON:0000916,2.00e-08,60;UBERON:0004921,6.45e-08,118 | |||
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|short_description=p1@SLC10A1 | |short_description=p1@SLC10A1 | ||
}} | }} |
Latest revision as of 19:56, 15 September 2015
Short description: | p1@SLC10A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC10A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 30bp_to_ENST00000216540, NM_003049, uc001xlr.2_5end |
EntrezGene: | SLC10A1 |
HGNC: | 10905 |
UniProt: | Q14973B2RA41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.56e-20 | 4 |
hepatocyte | 1.23e-15 | 12 |
epithelial cell of large intestine | 4.52e-11 | 2 |
endodermal cell | 1.14e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.87e-26 | 19 |
digestive gland | 2.87e-26 | 19 |
liver bud | 2.87e-26 | 19 |
hepatic diverticulum | 1.00e-22 | 22 |
liver primordium | 1.00e-22 | 22 |
digestive tract diverticulum | 9.49e-22 | 23 |
intestinal mucosa | 1.56e-20 | 4 |
wall of intestine | 1.56e-20 | 4 |
gastrointestinal system mucosa | 1.56e-20 | 4 |
gastrointestinal system epithelium | 1.56e-20 | 4 |
intestinal epithelium | 1.56e-20 | 4 |
epithelial sac | 4.98e-20 | 25 |
epithelium of foregut-midgut junction | 4.98e-20 | 25 |
anatomical boundary | 4.98e-20 | 25 |
hepatobiliary system | 4.98e-20 | 25 |
foregut-midgut junction | 4.98e-20 | 25 |
septum transversum | 4.98e-20 | 25 |
sac | 2.87e-19 | 26 |
gut epithelium | 9.45e-18 | 54 |
exocrine gland | 3.40e-16 | 31 |
exocrine system | 3.40e-16 | 31 |
endocrine gland | 2.30e-14 | 35 |
endo-epithelium | 1.27e-11 | 82 |
endocrine system | 3.32e-11 | 45 |
epithelium of mucosa | 8.90e-11 | 8 |
simple columnar epithelium | 1.10e-09 | 9 |
abdomen element | 2.36e-09 | 54 |
abdominal segment element | 2.36e-09 | 54 |
gland | 1.44e-08 | 59 |
abdominal segment of trunk | 2.00e-08 | 60 |
abdomen | 2.00e-08 | 60 |
subdivision of digestive tract | 6.45e-08 | 118 |