FFCP PHASE1:Hg19::chr11:116732029..116732040,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23387 | |EntrezGene=23387 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29165 | |HGNC=29165 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_uc001pqb.2_5end | |association_with_transcript=58bp_to_uc001pqb.2_5end | ||
|cluster_id=chr11:116732029..116732040,- | |||
|description=CAGE_peak_7_at_SIK3_5end | |description=CAGE_peak_7_at_SIK3_5end | ||
|id=chr11:116732029..116732040,- | |id=chr11:116732029..116732040,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.14e-26;2!CL:0000775;6.76e-18;3!CL:0002552;3.26e-11;5!CL:0000094;1.49e-07;8 | |ontology_enrichment_celltype_v019=CL:0000047;7.14e-26;2!CL:0000775;6.76e-18;3!CL:0002552;3.26e-11;5!CL:0000094;1.49e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.76e-18,3;CL:0002552,3.60e-11,5;CL:0000094,1.49e-07,8;CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.22e-13!115;UBERON:0001893!1.98e-10!34;UBERON:0002780!3.10e-10!41;UBERON:0001890!3.10e-10!41;UBERON:0006240!3.10e-10!41;UBERON:0003080!7.25e-10!42;UBERON:0002791!9.77e-10!33;UBERON:0001869!8.78e-09!32;UBERON:0000200!1.82e-08!6;UBERON:0002020!4.23e-08!34;UBERON:0003528!4.23e-08!34;UBERON:0009663!2.44e-07!7;UBERON:0001049!8.23e-07!57;UBERON:0005068!8.23e-07!57;UBERON:0006241!8.23e-07!57;UBERON:0007135!8.23e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!4.22e-13!115;UBERON:0001893!1.98e-10!34;UBERON:0002780!3.10e-10!41;UBERON:0001890!3.10e-10!41;UBERON:0006240!3.10e-10!41;UBERON:0003080!7.25e-10!42;UBERON:0002791!9.77e-10!33;UBERON:0001869!8.78e-09!32;UBERON:0000200!1.82e-08!6;UBERON:0002020!4.23e-08!34;UBERON:0003528!4.23e-08!34;UBERON:0009663!2.44e-07!7;UBERON:0001049!8.23e-07!57;UBERON:0005068!8.23e-07!57;UBERON:0006241!8.23e-07!57;UBERON:0007135!8.23e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.69e-07;8!UBERON:0001828;1.69e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.69e-07;8!UBERON:0001828;1.69e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.59e-07,8;UBERON:0001828,1.80e-07,8 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.76228387266739,1.30139853857622,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.483437798366489,0.200506470303285,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0,0,0.179515288819544,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.702793337176017,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0.439656701034247,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.244052529803926,0.1251909307065,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0.173858272302579,0,0,0.3414369541879,0,0.430227358820278,0,0.170426809518315,0.423387050190929,0,0,0,0.111855431797792,0.098150233615243,0,0.647428837187895,0.410651227424988,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,1.89446745545599,0,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.76228387266739,1.30139853857622,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.483437798366489,0.200506470303285,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0,0,0.179515288819544,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.702793337176017,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0.439656701034247,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.244052529803926,0.1251909307065,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0.173858272302579,0,0,0.3414369541879,0,0.430227358820278,0,0.170426809518315,0.423387050190929,0,0,0,0.111855431797792,0.098150233615243,0,0.647428837187895,0.410651227424988,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,1.89446745545599,0,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p7@SIK3 | |short_description=p7@SIK3 | ||
}} | }} |
Latest revision as of 20:01, 15 September 2015
Short description: | p7@SIK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SIK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_uc001pqb.2_5end |
EntrezGene: | SIK3 |
HGNC: | 29165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.76e-18 | 3 |
fibroblast of gingiva | 3.60e-11 | 5 |
granulocyte | 1.49e-07 | 8 |
neuronal stem cell | 1.69e-07 | 8 |